Wall clock time and date at job start Tue Mar 9 2021 12:55:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34237 * 116.99702 * 2 1 4 4 O 1.20824 * 119.99999 * 0.02562 * 3 2 1 5 5 C 1.50697 * 119.99883 * 180.02562 * 3 2 1 6 6 H 1.09005 * 112.84888 * 311.19344 * 5 3 2 7 7 C 1.54049 * 113.62278 * 82.50186 * 5 3 2 8 8 C 1.53780 * 86.98511 * 139.97937 * 7 5 3 9 9 H 1.09002 * 113.61563 * 219.98501 * 8 7 5 10 10 N 1.46497 * 113.61441 * 89.16476 * 8 7 5 11 11 C 1.34776 * 120.00268 * 105.86462 * 10 8 7 12 12 O 1.21284 * 119.99692 * 359.97438 * 11 10 8 13 13 C 1.50695 * 120.00405 * 180.02562 * 11 10 8 14 14 O 1.42904 * 109.47463 * 179.97438 * 13 11 10 15 15 C 1.35974 * 116.99944 * 180.02562 * 14 13 11 16 16 C 1.38677 * 119.99987 * 179.97438 * 15 14 13 17 17 C 1.50701 * 119.99796 * 359.97438 * 16 15 14 18 18 O 1.42901 * 109.47286 * 285.00280 * 17 16 15 19 19 Si 1.86304 * 109.47194 * 165.00410 * 17 16 15 20 20 C 1.38155 * 120.00417 * 179.97438 * 16 15 14 21 21 C 1.38673 * 119.99563 * 0.02562 * 20 16 15 22 22 O 1.35984 * 119.99984 * 179.97438 * 21 20 16 23 23 C 1.42901 * 117.00089 * 180.02562 * 22 21 20 24 24 C 1.38717 * 120.00465 * 359.97438 * 21 20 16 25 25 C 1.38115 * 120.00013 * 359.97438 * 24 21 20 26 26 C 1.53774 * 87.17344 * 334.57164 * 8 7 5 27 27 H 1.09001 * 109.46903 * 180.02562 * 1 2 3 28 28 H 1.09000 * 109.46533 * 299.99607 * 1 2 3 29 29 H 1.08993 * 109.47585 * 59.99417 * 1 2 3 30 30 H 1.09003 * 113.61285 * 25.47621 * 7 5 3 31 31 H 1.08996 * 113.69809 * 254.49768 * 7 5 3 32 32 H 0.97000 * 119.99840 * 285.86286 * 10 8 7 33 33 H 1.09005 * 109.47304 * 59.99603 * 13 11 10 34 34 H 1.09004 * 109.46867 * 300.00004 * 13 11 10 35 35 H 1.09003 * 109.47211 * 45.00335 * 17 16 15 36 36 H 0.96693 * 113.99989 * 180.02562 * 18 17 16 37 37 H 1.48506 * 109.99880 * 298.68167 * 19 17 16 38 38 H 1.48504 * 110.00068 * 59.99769 * 19 17 16 39 39 H 1.07999 * 120.00206 * 179.97438 * 20 16 15 40 40 H 1.09006 * 109.46831 * 180.02562 * 23 22 21 41 41 H 1.09003 * 109.47295 * 300.00278 * 23 22 21 42 42 H 1.08999 * 109.47033 * 60.00571 * 23 22 21 43 43 H 1.08000 * 120.00736 * 180.02562 * 24 21 20 44 44 H 1.07995 * 120.00219 * 179.74609 * 25 24 21 45 45 H 1.09004 * 113.61477 * 140.02139 * 26 8 7 46 46 H 1.09003 * 113.61962 * 270.92479 * 26 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2750 -0.0006 6 1 4.0239 0.6364 0.7550 7 6 4.1918 1.1237 -1.4002 8 6 5.1806 2.2272 -0.9885 9 1 5.3964 2.9394 -1.7849 10 7 6.3902 1.7182 -0.3374 11 6 7.5601 1.7030 -1.0064 12 8 7.6114 2.1103 -2.1476 13 6 8.8043 1.1789 -0.3368 14 8 9.9057 1.2657 -1.2432 15 6 11.1121 0.8297 -0.7922 16 6 12.2232 0.8850 -1.6203 17 6 12.0933 1.4277 -3.0202 18 8 11.4447 0.4601 -3.8480 19 14 13.7871 1.7943 -3.7038 20 6 13.4491 0.4426 -1.1620 21 6 13.5684 -0.0573 0.1260 22 8 14.7749 -0.4933 0.5770 23 6 14.8248 -0.9961 1.9137 24 6 12.4572 -0.1126 0.9544 25 6 11.2318 0.3306 0.4966 26 6 4.1077 2.7143 -0.0005 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3632 0.5138 0.8901 29 1 -0.3634 0.5139 -0.8898 30 1 3.5241 1.4159 -2.2108 31 1 4.6631 0.1551 -1.5670 32 1 6.3491 1.3921 0.5752 33 1 8.6516 0.1385 -0.0497 34 1 9.0167 1.7736 0.5517 35 1 11.5030 2.3439 -3.0014 36 1 11.3276 0.7426 -4.7653 37 1 14.4597 2.8227 -2.8700 38 1 14.6019 0.5531 -3.7346 39 1 14.3142 0.4852 -1.8070 40 1 15.8427 -1.3091 2.1464 41 1 14.5179 -0.2138 2.6079 42 1 14.1520 -1.8487 2.0065 43 1 12.5502 -0.5016 1.9576 44 1 10.3658 0.2838 1.1401 45 1 4.5111 3.0291 0.9620 46 1 3.4170 3.4407 -0.4290 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_4974302.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:38 Heat of formation + Delta-G solvation = -152.488941 kcal Electronic energy + Delta-G solvation = -30594.268463 eV Core-core repulsion = 26032.508707 eV Total energy + Delta-G solvation = -4561.759756 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.09926 -41.71591 -40.92122 -40.01956 -39.07879 -37.93534 -37.35214 -36.88644 -34.52601 -32.91164 -31.15533 -29.91333 -29.11373 -28.09978 -27.01230 -26.85115 -26.50729 -23.89081 -22.59431 -22.30433 -21.91422 -20.53970 -19.44344 -19.00555 -18.65397 -18.35763 -18.26371 -17.90864 -17.49496 -17.40062 -17.31947 -17.02292 -16.70505 -16.02097 -15.89270 -15.60037 -15.49447 -15.21464 -15.12004 -14.95890 -14.50545 -14.29050 -14.07167 -13.89955 -13.79159 -13.70196 -13.56045 -13.44815 -13.21906 -13.08064 -12.91420 -12.64548 -12.55404 -12.00530 -11.88413 -11.81901 -11.80898 -11.71750 -11.49052 -11.37133 -10.95238 -10.29703 -10.15679 -10.07877 -8.79281 -4.88036 0.04903 0.37702 1.10908 1.35794 1.38953 1.41629 1.66836 1.74028 2.06024 2.23353 2.49364 2.54436 3.08490 3.16538 3.36484 3.48320 3.52959 3.63431 3.63673 3.74112 3.85642 3.88326 3.90448 4.00489 4.07236 4.12921 4.15742 4.20779 4.20880 4.31782 4.32739 4.45711 4.48383 4.52788 4.54559 4.58414 4.62534 4.64394 4.72359 4.82952 5.02820 5.11800 5.18227 5.31706 5.34899 5.40824 6.10036 6.25471 6.39516 6.68910 6.82450 7.01934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.125 0.875 7 C -0.132 4.132 8 C 0.124 3.876 9 H 0.116 0.884 10 N -0.713 5.713 11 C 0.521 3.479 12 O -0.504 6.504 13 C 0.039 3.961 14 O -0.276 6.276 15 C 0.119 3.881 16 C -0.061 4.061 17 C -0.061 4.061 18 O -0.540 6.540 19 Si 0.682 3.318 20 C -0.116 4.116 21 C 0.100 3.900 22 O -0.317 6.317 23 C 0.026 3.974 24 C -0.161 4.161 25 C -0.169 4.169 26 C -0.123 4.123 27 H 0.103 0.897 28 H 0.064 0.936 29 H 0.064 0.936 30 H 0.100 0.900 31 H 0.088 0.912 32 H 0.403 0.597 33 H 0.094 0.906 34 H 0.094 0.906 35 H 0.078 0.922 36 H 0.381 0.619 37 H -0.254 1.254 38 H -0.249 1.249 39 H 0.138 0.862 40 H 0.103 0.897 41 H 0.056 0.944 42 H 0.057 0.943 43 H 0.137 0.863 44 H 0.136 0.864 45 H 0.086 0.914 46 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.011 -1.498 3.883 4.283 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.170 4.170 8 C 0.019 3.981 9 H 0.134 0.866 10 N -0.367 5.367 11 C 0.305 3.695 12 O -0.376 6.376 13 C -0.040 4.040 14 O -0.189 6.189 15 C 0.073 3.927 16 C -0.062 4.062 17 C -0.172 4.172 18 O -0.346 6.346 19 Si 0.583 3.417 20 C -0.134 4.134 21 C 0.055 3.945 22 O -0.231 6.231 23 C -0.069 4.069 24 C -0.180 4.180 25 C -0.188 4.188 26 C -0.161 4.161 27 H 0.122 0.878 28 H 0.083 0.917 29 H 0.083 0.917 30 H 0.118 0.882 31 H 0.107 0.893 32 H 0.238 0.762 33 H 0.112 0.888 34 H 0.111 0.889 35 H 0.096 0.904 36 H 0.229 0.771 37 H -0.178 1.178 38 H -0.174 1.174 39 H 0.155 0.845 40 H 0.121 0.879 41 H 0.075 0.925 42 H 0.075 0.925 43 H 0.154 0.846 44 H 0.153 0.847 45 H 0.105 0.895 46 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -0.185 -1.162 3.456 3.650 hybrid contribution -0.934 -0.517 1.692 2.000 sum -1.119 -1.679 5.147 5.528 Atomic orbital electron populations 1.23328 0.75898 1.04033 1.02743 1.86521 1.23774 1.33339 1.83788 1.23553 0.91663 0.81446 0.72143 1.90691 1.66964 1.36423 1.44979 1.22711 0.87716 1.00994 1.01823 0.85703 1.23452 0.97793 1.01227 0.94566 1.21791 0.83178 0.96440 0.96674 0.86644 1.45488 1.07546 1.66055 1.17652 1.20012 0.83894 0.78785 0.86767 1.90795 1.85179 1.44533 1.17131 1.22446 0.85650 1.02791 0.93134 1.86220 1.14086 1.79328 1.39218 1.18566 0.85011 0.96873 0.92229 1.18404 0.90481 1.02536 0.94796 1.24492 1.08802 0.94257 0.89636 1.86491 1.81757 1.42149 1.24187 0.95327 0.75255 0.81178 0.89947 1.20087 0.97105 1.01750 0.94488 1.18718 0.85018 0.97459 0.93301 1.86105 1.28135 1.77158 1.31657 1.23105 1.04179 0.98497 0.81073 1.21081 0.92138 1.04244 1.00494 1.21052 0.98759 1.03872 0.95109 1.23361 0.96917 0.94872 1.00990 0.87840 0.91739 0.91696 0.88151 0.89316 0.76216 0.88789 0.88857 0.90375 0.77118 1.17816 1.17353 0.84512 0.87898 0.92524 0.92487 0.84573 0.84668 0.89491 0.86769 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.33 10.57 -39.28 -0.41 -0.74 16 3 C 0.47 0.49 7.49 36.00 0.27 0.76 16 4 O -0.50 -1.98 15.65 -18.75 -0.29 -2.28 16 5 C -0.11 0.25 4.15 -90.82 -0.38 -0.13 16 6 H 0.13 -0.55 8.14 -51.93 -0.42 -0.97 16 7 C -0.13 0.26 7.45 -25.78 -0.19 0.06 16 8 C 0.12 -0.23 4.29 -67.12 -0.29 -0.52 16 9 H 0.12 -0.01 7.50 -51.93 -0.39 -0.40 16 10 N -0.71 1.93 5.26 -53.02 -0.28 1.65 16 11 C 0.52 0.33 7.91 -10.99 -0.09 0.25 16 12 O -0.50 -2.77 16.12 -14.35 -0.23 -3.00 16 13 C 0.04 -0.04 5.22 36.00 0.19 0.15 16 14 O -0.28 -0.91 9.00 -39.57 -0.36 -1.26 16 15 C 0.12 0.38 6.66 -39.24 -0.26 0.12 16 16 C -0.06 -0.25 5.30 -104.49 -0.55 -0.81 16 17 C -0.06 -0.15 2.36 36.01 0.09 -0.07 16 18 O -0.54 -1.58 12.86 -35.23 -0.45 -2.03 16 19 Si 0.68 0.47 30.20 -169.99 -5.13 -4.66 16 20 C -0.12 -0.49 8.59 -39.45 -0.34 -0.83 16 21 C 0.10 0.33 6.69 -39.24 -0.26 0.07 16 22 O -0.32 -0.95 10.50 -19.69 -0.21 -1.16 16 23 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 24 C -0.16 -0.18 9.03 -39.45 -0.36 -0.53 16 25 C -0.17 -0.13 9.03 -39.45 -0.36 -0.49 16 26 C -0.12 0.31 7.15 -25.92 -0.19 0.12 16 27 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 28 H 0.06 -0.05 8.13 -51.93 -0.42 -0.48 16 29 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 30 H 0.10 -0.16 8.10 -51.93 -0.42 -0.58 16 31 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 32 H 0.40 -2.40 8.70 -40.82 -0.36 -2.76 16 33 H 0.09 -0.32 7.66 -51.93 -0.40 -0.72 16 34 H 0.09 -0.36 7.66 -51.93 -0.40 -0.75 16 35 H 0.08 0.17 7.82 -51.93 -0.41 -0.24 16 36 H 0.38 -0.75 8.74 45.56 0.40 -0.35 16 37 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 38 H -0.25 -0.83 6.75 56.52 0.38 -0.44 16 39 H 0.14 0.56 4.90 -52.49 -0.26 0.30 16 40 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 41 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 42 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 43 H 0.14 -0.21 6.29 -52.49 -0.33 -0.54 16 44 H 0.14 -0.35 6.29 -52.49 -0.33 -0.68 16 45 H 0.09 -0.32 8.14 -51.93 -0.42 -0.75 16 46 H 0.11 -0.13 7.44 -51.93 -0.39 -0.52 16 LS Contribution 389.09 15.07 5.86 5.86 Total: 0.00 -12.86 389.09 -8.41 -21.27 By element: Atomic # 1 Polarization: -7.56 SS G_CDS: -6.24 Total: -13.80 kcal Atomic # 6 Polarization: 0.81 SS G_CDS: -0.66 Total: 0.15 kcal Atomic # 7 Polarization: 1.93 SS G_CDS: -0.28 Total: 1.65 kcal Atomic # 8 Polarization: -8.51 SS G_CDS: -1.96 Total: -10.47 kcal Atomic # 14 Polarization: 0.47 SS G_CDS: -5.13 Total: -4.66 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -12.86 -8.41 -21.27 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_4974302.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.223 kcal (2) G-P(sol) polarization free energy of solvation -12.860 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.083 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.406 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.266 kcal (6) G-S(sol) free energy of system = (1) + (5) -152.489 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds