Wall clock time and date at job start Tue Mar 9 2021 12:55:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34232 * 116.99927 * 2 1 4 4 O 1.20820 * 119.99791 * 359.97438 * 3 2 1 5 5 C 1.50701 * 119.99882 * 179.97438 * 3 2 1 6 6 H 1.09002 * 112.85178 * 309.66385 * 5 3 2 7 7 C 1.53785 * 113.69000 * 80.93543 * 5 3 2 8 8 C 1.53779 * 87.08093 * 139.98979 * 7 5 3 9 9 H 1.08994 * 113.61314 * 220.01752 * 8 7 5 10 10 N 1.46504 * 113.61484 * 89.11287 * 8 7 5 11 11 C 1.34781 * 119.99665 * 107.49929 * 10 8 7 12 12 O 1.21280 * 119.99730 * 0.02562 * 11 10 8 13 13 C 1.50696 * 119.99783 * 179.97438 * 11 10 8 14 14 O 1.42897 * 109.46960 * 180.02562 * 13 11 10 15 15 C 1.35901 * 117.00061 * 179.97438 * 14 13 11 16 16 C 1.38751 * 120.03022 * 179.72071 * 15 14 13 17 17 C 1.50698 * 119.97024 * 0.03249 * 16 15 14 18 18 O 1.42903 * 109.46996 * 284.99133 * 17 16 15 19 19 Si 1.86301 * 109.47141 * 164.99801 * 17 16 15 20 20 C 1.38194 * 120.05619 * 179.76792 * 16 15 14 21 21 C 1.38156 * 120.10718 * 0.51235 * 20 16 15 22 22 C 1.38794 * 120.05539 * 359.74623 * 21 20 16 23 23 O 1.35899 * 120.02764 * 179.97438 * 22 21 20 24 24 C 1.42902 * 116.99732 * 0.02562 * 23 22 21 25 25 C 1.38611 * 119.94575 * 359.97438 * 22 21 20 26 26 C 1.53781 * 113.61206 * 178.47078 * 5 3 2 27 27 H 1.09003 * 109.47339 * 60.00475 * 1 2 3 28 28 H 1.09003 * 109.47128 * 180.02562 * 1 2 3 29 29 H 1.09001 * 109.47909 * 300.00335 * 1 2 3 30 30 H 1.09003 * 113.60734 * 254.54099 * 7 5 3 31 31 H 1.08996 * 113.61146 * 25.43597 * 7 5 3 32 32 H 0.96996 * 119.99953 * 287.50554 * 10 8 7 33 33 H 1.09003 * 109.47145 * 300.00264 * 13 11 10 34 34 H 1.09007 * 109.47317 * 60.00401 * 13 11 10 35 35 H 1.08998 * 109.47639 * 44.99391 * 17 16 15 36 36 H 0.96698 * 114.00287 * 300.00879 * 18 17 16 37 37 H 1.48498 * 110.00008 * 58.67487 * 19 17 16 38 38 H 1.48501 * 109.99992 * 179.97438 * 19 17 16 39 39 H 1.08005 * 119.94932 * 180.25873 * 20 16 15 40 40 H 1.08008 * 119.97368 * 179.72020 * 21 20 16 41 41 H 1.09002 * 109.46809 * 179.97438 * 24 23 22 42 42 H 1.08991 * 109.47519 * 299.99433 * 24 23 22 43 43 H 1.08999 * 109.46995 * 60.00412 * 24 23 22 44 44 H 1.07997 * 120.05644 * 179.97438 * 25 22 21 45 45 H 1.09005 * 113.61302 * 334.48043 * 26 5 3 46 46 H 1.08996 * 113.61527 * 105.30207 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 4.0223 0.6569 0.7741 7 6 4.1955 1.0854 -1.3898 8 6 5.1841 2.1995 -1.0076 9 1 5.4017 2.8889 -1.8234 10 7 6.3914 1.7088 -0.3384 11 6 7.5698 1.7040 -0.9926 12 8 7.6307 2.1064 -2.1350 13 6 8.8118 1.1997 -0.3040 14 8 9.9235 1.2956 -1.1966 15 6 11.1291 0.8790 -0.7276 16 6 12.2499 0.9388 -1.5433 17 6 12.1301 1.4668 -2.9497 18 8 11.5023 0.4839 -3.7755 19 14 13.8275 1.8463 -3.6172 20 6 13.4770 0.5198 -1.0653 21 6 13.5890 0.0305 0.2218 22 6 12.4698 -0.0364 1.0399 23 8 12.5805 -0.5182 2.3058 24 6 13.8794 -0.9378 2.7289 25 6 11.2390 0.3887 0.5648 26 6 4.1077 2.7137 -0.0371 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3635 0.5139 0.8899 30 1 4.6663 0.1119 -1.5269 31 1 3.5303 1.3543 -2.2103 32 1 6.3426 1.3872 0.5754 33 1 9.0055 1.8025 0.5832 34 1 8.6684 0.1592 -0.0121 35 1 11.5292 2.3762 -2.9465 36 1 11.9832 -0.3535 -3.8251 37 1 14.6667 0.6213 -3.5971 38 1 13.7231 2.3672 -5.0040 39 1 14.3491 0.5711 -1.7004 40 1 14.5482 -0.3006 0.5917 41 1 13.8278 -1.2992 3.7559 42 1 14.2323 -1.7384 2.0790 43 1 14.5688 -0.0952 2.6749 44 1 10.3669 0.3371 1.1997 45 1 3.4186 3.4279 -0.4880 46 1 4.5064 3.0554 0.9181 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12121848_4974312.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:41 Heat of formation + Delta-G solvation = -155.002072 kcal Electronic energy + Delta-G solvation = -30674.944118 eV Core-core repulsion = 26113.075384 eV Total energy + Delta-G solvation = -4561.868734 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.149 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.09064 -41.75824 -40.90561 -40.04311 -39.12013 -38.17950 -37.33818 -36.91085 -34.50239 -32.29781 -31.46661 -29.93664 -29.09358 -28.51612 -26.98185 -26.84669 -26.07684 -23.89311 -22.58152 -22.46989 -21.92056 -20.52202 -19.98055 -19.01460 -18.47495 -18.06958 -17.89881 -17.68100 -17.50673 -17.38064 -17.23857 -16.85211 -16.77116 -16.44032 -15.95253 -15.87770 -15.47869 -15.20920 -15.17150 -14.97776 -14.58531 -14.48090 -14.24920 -13.84408 -13.66019 -13.59634 -13.45887 -13.41396 -13.21683 -13.12923 -12.89091 -12.58573 -12.28825 -11.98132 -11.96824 -11.86425 -11.80125 -11.70503 -11.53968 -11.34816 -10.93482 -10.38015 -10.26876 -9.70850 -9.09030 -4.88907 0.20302 0.32288 1.13162 1.34483 1.39207 1.44236 1.62787 1.68633 2.04953 2.13330 2.48734 2.57725 3.10805 3.19554 3.40820 3.55001 3.58103 3.65607 3.67317 3.76845 3.85354 3.89599 3.92710 4.00026 4.02420 4.13134 4.14423 4.22276 4.24299 4.35352 4.36589 4.39762 4.50443 4.51313 4.56851 4.60629 4.66914 4.74640 4.76221 4.85677 5.03243 5.22022 5.27407 5.34508 5.36746 5.44598 6.08392 6.24781 6.34454 6.62634 6.70844 7.04773 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.469 3.531 4 O -0.503 6.503 5 C -0.113 4.113 6 H 0.126 0.874 7 C -0.132 4.132 8 C 0.124 3.876 9 H 0.116 0.884 10 N -0.713 5.713 11 C 0.520 3.480 12 O -0.503 6.503 13 C 0.037 3.963 14 O -0.272 6.272 15 C 0.193 3.807 16 C -0.181 4.181 17 C -0.059 4.059 18 O -0.521 6.521 19 Si 0.686 3.314 20 C -0.043 4.043 21 C -0.239 4.239 22 C 0.174 3.826 23 O -0.315 6.315 24 C 0.025 3.975 25 C -0.247 4.247 26 C -0.124 4.124 27 H 0.064 0.936 28 H 0.103 0.897 29 H 0.064 0.936 30 H 0.088 0.912 31 H 0.100 0.900 32 H 0.403 0.597 33 H 0.098 0.902 34 H 0.097 0.903 35 H 0.118 0.882 36 H 0.369 0.631 37 H -0.261 1.261 38 H -0.257 1.257 39 H 0.138 0.862 40 H 0.134 0.866 41 H 0.103 0.897 42 H 0.058 0.942 43 H 0.060 0.940 44 H 0.138 0.862 45 H 0.113 0.887 46 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.662 -2.465 6.429 7.382 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.312 3.688 4 O -0.391 6.391 5 C -0.132 4.132 6 H 0.143 0.857 7 C -0.171 4.171 8 C 0.019 3.981 9 H 0.134 0.866 10 N -0.367 5.367 11 C 0.304 3.696 12 O -0.375 6.375 13 C -0.042 4.042 14 O -0.183 6.183 15 C 0.146 3.854 16 C -0.182 4.182 17 C -0.169 4.169 18 O -0.326 6.326 19 Si 0.588 3.412 20 C -0.060 4.060 21 C -0.258 4.258 22 C 0.128 3.872 23 O -0.228 6.228 24 C -0.069 4.069 25 C -0.267 4.267 26 C -0.161 4.161 27 H 0.083 0.917 28 H 0.121 0.879 29 H 0.083 0.917 30 H 0.107 0.893 31 H 0.118 0.882 32 H 0.238 0.762 33 H 0.115 0.885 34 H 0.115 0.885 35 H 0.136 0.864 36 H 0.216 0.784 37 H -0.186 1.186 38 H -0.182 1.182 39 H 0.156 0.844 40 H 0.152 0.848 41 H 0.121 0.879 42 H 0.077 0.923 43 H 0.078 0.922 44 H 0.156 0.844 45 H 0.132 0.868 46 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 2.447 -1.504 4.831 5.620 hybrid contribution -0.571 -1.555 0.715 1.805 sum 1.875 -3.060 5.546 6.606 Atomic orbital electron populations 1.23326 0.75923 1.04019 1.02737 1.86518 1.23751 1.33349 1.83794 1.23556 0.91663 0.81441 0.72138 1.90690 1.66963 1.36428 1.44971 1.22666 0.87688 1.01010 1.01858 0.85660 1.23409 0.97794 1.01159 0.94742 1.21796 0.83218 0.96415 0.96682 0.86573 1.45477 1.07093 1.66577 1.17552 1.20014 0.83920 0.78746 0.86884 1.90816 1.85312 1.44340 1.17051 1.22505 0.85226 1.03164 0.93271 1.86261 1.13691 1.79113 1.39234 1.18390 0.84847 0.91563 0.90600 1.19507 0.91409 1.09604 0.97724 1.24816 1.09844 0.94516 0.87745 1.86701 1.50994 1.26092 1.68844 0.95203 0.76050 0.86100 0.83877 1.20782 0.96093 0.94082 0.95071 1.21125 0.98537 1.10338 0.95773 1.18692 0.93338 0.91413 0.83733 1.86076 1.32938 1.76819 1.26935 1.23146 0.82777 0.99741 1.01282 1.20390 0.97777 1.12109 0.96384 1.23366 0.96879 0.94771 1.01131 0.91715 0.87852 0.91735 0.89342 0.88180 0.76174 0.88450 0.88547 0.86431 0.78397 1.18642 1.18195 0.84437 0.84778 0.87882 0.92301 0.92154 0.84394 0.86834 0.89447 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.40 10.57 -39.26 -0.41 -0.82 16 3 C 0.47 0.61 7.49 36.01 0.27 0.88 16 4 O -0.50 -2.12 15.66 -18.75 -0.29 -2.41 16 5 C -0.11 0.22 4.13 -90.96 -0.38 -0.16 16 6 H 0.13 -0.52 8.14 -51.93 -0.42 -0.94 16 7 C -0.13 0.21 7.43 -25.92 -0.19 0.02 16 8 C 0.12 -0.18 4.32 -67.11 -0.29 -0.47 16 9 H 0.12 0.04 7.47 -51.93 -0.39 -0.35 16 10 N -0.71 1.70 5.26 -53.02 -0.28 1.42 16 11 C 0.52 0.50 7.91 -10.99 -0.09 0.41 16 12 O -0.50 -3.08 16.10 -14.35 -0.23 -3.31 16 13 C 0.04 -0.04 5.22 36.00 0.19 0.15 16 14 O -0.27 -0.79 8.99 -39.34 -0.35 -1.14 16 15 C 0.19 0.38 6.66 -39.24 -0.26 0.12 16 16 C -0.18 -0.28 5.28 -104.45 -0.55 -0.83 16 17 C -0.06 -0.12 2.37 36.00 0.09 -0.03 16 18 O -0.52 -1.95 12.88 -35.23 -0.45 -2.41 16 19 Si 0.69 0.05 30.23 -169.99 -5.14 -5.09 16 20 C -0.04 0.00 8.65 -39.63 -0.34 -0.34 16 21 C -0.24 0.03 9.04 -39.41 -0.36 -0.33 16 22 C 0.17 0.16 6.68 -39.24 -0.26 -0.11 16 23 O -0.31 -0.19 10.49 -19.42 -0.20 -0.39 16 24 C 0.03 -0.07 9.81 101.05 0.99 0.92 16 25 C -0.25 -0.19 8.97 -39.29 -0.35 -0.54 16 26 C -0.12 0.27 7.14 -25.92 -0.19 0.08 16 27 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 28 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 29 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 30 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 31 H 0.10 -0.12 8.10 -51.93 -0.42 -0.54 16 32 H 0.40 -2.28 8.70 -40.82 -0.36 -2.63 16 33 H 0.10 -0.35 7.66 -51.93 -0.40 -0.75 16 34 H 0.10 -0.31 7.66 -51.93 -0.40 -0.71 16 35 H 0.12 0.33 7.82 -51.93 -0.41 -0.07 16 36 H 0.37 0.11 8.70 45.56 0.40 0.51 16 37 H -0.26 -0.27 6.69 56.52 0.38 0.11 16 38 H -0.26 -0.92 7.11 56.52 0.40 -0.51 16 39 H 0.14 -0.22 4.85 -52.48 -0.25 -0.47 16 40 H 0.13 -0.29 6.29 -52.48 -0.33 -0.62 16 41 H 0.10 -0.42 8.14 -51.93 -0.42 -0.85 16 42 H 0.06 -0.20 7.66 -51.93 -0.40 -0.60 16 43 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 44 H 0.14 -0.17 6.30 -52.49 -0.33 -0.51 16 45 H 0.11 -0.10 7.46 -51.93 -0.39 -0.48 16 46 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 LS Contribution 388.94 15.07 5.86 5.86 Total: 0.00 -12.03 388.94 -8.41 -20.44 By element: Atomic # 1 Polarization: -6.73 SS G_CDS: -6.25 Total: -12.98 kcal Atomic # 6 Polarization: 1.48 SS G_CDS: -0.66 Total: 0.82 kcal Atomic # 7 Polarization: 1.70 SS G_CDS: -0.28 Total: 1.42 kcal Atomic # 8 Polarization: -8.52 SS G_CDS: -1.95 Total: -10.48 kcal Atomic # 14 Polarization: 0.05 SS G_CDS: -5.14 Total: -5.09 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -12.03 -8.41 -20.44 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12121848_4974312.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -134.559 kcal (2) G-P(sol) polarization free energy of solvation -12.034 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -146.593 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.409 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.443 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.002 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds