Wall clock time and date at job start Tue Mar 9 2021 12:58:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35999 * 116.99730 * 2 1 4 4 C 1.39156 * 120.07026 * 180.02562 * 3 2 1 5 5 O 1.35994 * 120.07474 * 359.97438 * 4 3 2 6 6 C 1.42900 * 116.99942 * 180.02562 * 5 4 3 7 7 C 1.50703 * 109.46859 * 179.97438 * 6 5 4 8 8 O 1.21277 * 119.99948 * 0.02562 * 7 6 5 9 9 N 1.34779 * 119.99369 * 180.02562 * 7 6 5 10 10 C 1.46496 * 119.99390 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.91246 * 23.74616 * 10 9 7 12 12 C 1.53786 * 113.61518 * 154.99856 * 10 9 7 13 13 C 1.53781 * 87.17350 * 89.15486 * 12 10 9 14 14 H 1.08997 * 113.61223 * 270.84552 * 13 12 10 15 15 O 1.42900 * 113.61371 * 140.02193 * 13 12 10 16 16 C 1.53782 * 87.08260 * 25.39213 * 13 12 10 17 17 C 1.38568 * 119.85033 * 180.25767 * 4 3 2 18 18 C 1.38240 * 119.99870 * 359.42146 * 17 4 3 19 19 C 1.38260 * 120.14515 * 0.59996 * 18 17 4 20 20 C 1.50702 * 119.92283 * 179.70060 * 19 18 17 21 21 O 1.42902 * 109.46816 * 244.97614 * 20 19 18 22 22 Si 1.86297 * 109.47264 * 4.97844 * 20 19 18 23 23 C 1.38233 * 120.14645 * 359.68151 * 19 18 17 24 24 H 1.08994 * 109.47395 * 59.99556 * 1 2 3 25 25 H 1.09006 * 109.46818 * 180.02562 * 1 2 3 26 26 H 1.09006 * 109.46636 * 299.99174 * 1 2 3 27 27 H 1.09002 * 109.47129 * 60.00013 * 6 5 4 28 28 H 1.09002 * 109.46992 * 300.00118 * 6 5 4 29 29 H 0.97001 * 120.00492 * 359.97438 * 9 7 6 30 30 H 1.09002 * 113.61357 * 334.56403 * 12 10 9 31 31 H 1.09002 * 113.61608 * 203.74565 * 12 10 9 32 32 H 0.96705 * 114.00018 * 179.97438 * 15 13 12 33 33 H 1.08997 * 113.61668 * 89.11298 * 16 13 12 34 34 H 1.08994 * 113.61387 * 220.02033 * 16 13 12 35 35 H 1.07995 * 119.99745 * 179.72410 * 17 4 3 36 36 H 1.08003 * 119.92478 * 180.30341 * 18 17 4 37 37 H 1.09001 * 109.46980 * 124.98008 * 20 19 18 38 38 H 0.96703 * 114.00091 * 60.00700 * 21 20 19 39 39 H 1.48500 * 110.00049 * 180.02562 * 22 20 19 40 40 H 1.48497 * 110.00292 * 301.31663 * 22 20 19 41 41 H 1.08007 * 119.99955 * 180.02562 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 3.4360 1.2864 -0.0005 5 8 4.1796 0.1478 -0.0005 6 6 5.6004 0.3008 -0.0005 7 6 6.2519 -1.0581 0.0001 8 8 5.5670 -2.0590 0.0000 9 7 7.5958 -1.1610 0.0007 10 6 8.2292 -2.4819 0.0008 11 1 7.5842 -3.2618 -0.4040 12 6 9.6473 -2.4852 -0.5941 13 6 10.1604 -2.1824 0.8236 14 1 10.2181 -1.1175 1.0489 15 8 11.3568 -2.8868 1.1620 16 6 8.8794 -2.8540 1.3458 17 6 4.0603 2.5235 0.0049 18 6 3.3029 3.6799 -0.0013 19 6 1.9223 3.6057 -0.0004 20 6 1.1015 4.8696 -0.0003 21 8 0.3650 4.9591 1.2210 22 14 2.2307 6.3434 -0.1540 23 6 1.2932 2.3748 0.0001 24 1 -0.3634 0.5139 -0.8899 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5137 0.8901 27 1 5.9066 0.8506 0.8895 28 1 5.9065 0.8506 -0.8905 29 1 8.1436 -0.3604 0.0004 30 1 9.8247 -1.6776 -1.3044 31 1 9.9597 -3.4583 -0.9729 32 1 11.6847 -2.7001 2.0524 33 1 8.9805 -3.9286 1.4979 34 1 8.4368 -2.3442 2.2016 35 1 5.1385 2.5841 0.0090 36 1 3.7907 4.6435 -0.0020 37 1 0.4090 4.8531 -0.8419 38 1 0.9185 4.9784 2.0137 39 1 1.4334 7.5962 -0.1545 40 1 3.2005 6.3597 0.9704 41 1 0.2145 2.3196 0.0004 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12122388_60476.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:25 Heat of formation + Delta-G solvation = -119.437648 kcal Electronic energy + Delta-G solvation = -25261.050914 eV Core-core repulsion = 21303.170321 eV Total energy + Delta-G solvation = -3957.880593 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -41.84974 -41.30177 -39.97170 -39.05646 -38.84705 -37.02559 -36.42925 -33.96516 -32.04741 -31.47655 -29.61928 -28.43875 -26.90467 -26.29240 -25.33777 -23.61926 -22.60955 -21.91489 -20.67788 -19.83389 -18.87234 -18.58541 -18.24641 -17.90778 -17.56499 -17.13368 -16.91658 -16.64763 -16.25374 -16.15977 -15.92928 -15.81331 -15.61290 -15.26136 -15.04800 -14.69645 -14.30713 -13.79588 -13.75985 -13.56334 -13.53649 -13.42973 -12.89597 -12.65565 -12.57596 -12.53022 -12.21029 -12.14662 -12.02102 -11.65763 -11.63441 -10.93587 -10.89081 -10.64502 -10.23302 -9.80993 -8.88169 -5.00442 0.15200 0.27647 1.23756 1.36558 1.43869 1.54461 1.91975 2.30204 2.46702 2.54149 3.09820 3.30986 3.32273 3.40125 3.50289 3.60255 3.68441 3.72663 3.76141 3.81915 3.88252 3.91441 4.10501 4.23592 4.28019 4.32006 4.45298 4.51202 4.54343 4.61980 4.64180 4.67748 4.77188 4.81847 4.92098 4.97877 5.07863 5.34837 5.37981 5.53294 5.93555 6.25593 6.36041 6.52434 6.57522 7.05113 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.105 3.895 5 O -0.277 6.277 6 C 0.039 3.961 7 C 0.519 3.481 8 O -0.505 6.505 9 N -0.713 5.713 10 C 0.122 3.878 11 H 0.113 0.887 12 C -0.134 4.134 13 C 0.075 3.925 14 H 0.081 0.919 15 O -0.558 6.558 16 C -0.181 4.181 17 C -0.170 4.170 18 C -0.115 4.115 19 C -0.113 4.113 20 C -0.073 4.073 21 O -0.530 6.530 22 Si 0.688 3.312 23 C -0.146 4.146 24 H 0.057 0.943 25 H 0.103 0.897 26 H 0.056 0.944 27 H 0.094 0.906 28 H 0.096 0.904 29 H 0.402 0.598 30 H 0.081 0.919 31 H 0.107 0.893 32 H 0.381 0.619 33 H 0.101 0.899 34 H 0.074 0.926 35 H 0.139 0.861 36 H 0.133 0.867 37 H 0.118 0.882 38 H 0.376 0.624 39 H -0.257 1.257 40 H -0.260 1.260 41 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.984 4.191 -0.644 5.818 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.040 4.040 7 C 0.303 3.697 8 O -0.377 6.377 9 N -0.367 5.367 10 C 0.017 3.983 11 H 0.131 0.869 12 C -0.172 4.172 13 C 0.016 3.984 14 H 0.098 0.902 15 O -0.364 6.364 16 C -0.220 4.220 17 C -0.188 4.188 18 C -0.133 4.133 19 C -0.113 4.113 20 C -0.183 4.183 21 O -0.336 6.336 22 Si 0.590 3.410 23 C -0.165 4.165 24 H 0.075 0.925 25 H 0.121 0.879 26 H 0.075 0.925 27 H 0.112 0.888 28 H 0.114 0.886 29 H 0.237 0.763 30 H 0.100 0.900 31 H 0.125 0.875 32 H 0.228 0.772 33 H 0.120 0.880 34 H 0.093 0.907 35 H 0.157 0.843 36 H 0.150 0.850 37 H 0.136 0.864 38 H 0.224 0.776 39 H -0.183 1.183 40 H -0.185 1.185 41 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 3.158 3.551 -1.298 4.926 hybrid contribution 0.042 0.596 1.762 1.861 sum 3.200 4.147 0.465 5.259 Atomic orbital electron populations 1.23137 0.78088 1.04433 1.01375 1.86253 1.21361 1.25320 1.88524 1.18286 0.89014 0.85584 1.00997 1.18282 0.88304 0.85741 1.01799 1.86279 1.15979 1.27788 1.88865 1.22465 0.81370 0.96082 1.04061 1.20041 0.82304 0.90650 0.76691 1.90806 1.62508 1.38020 1.46405 1.45500 1.05915 1.08862 1.76449 1.21687 0.93761 0.85593 0.97259 0.86890 1.23458 0.93281 1.04549 0.95955 1.23435 0.83659 0.94998 0.96293 0.90161 1.86537 1.42390 1.69867 1.37593 1.24201 0.96839 1.03000 0.97948 1.20986 1.00441 0.90676 1.06741 1.20737 0.92901 0.98028 1.01600 1.19974 0.93685 0.95098 1.02580 1.25013 1.01693 1.01713 0.89854 1.86603 1.36170 1.95484 1.15366 0.94939 0.79608 0.76425 0.90071 1.20945 1.00387 0.90402 1.04723 0.92479 0.87854 0.92528 0.88794 0.88577 0.76310 0.90040 0.87497 0.77153 0.88040 0.90726 0.84324 0.84993 0.86413 0.77616 1.18258 1.18483 0.84181 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.28 10.28 -34.24 -0.35 -1.63 16 3 C 0.11 0.34 6.70 -39.12 -0.26 0.08 16 4 C 0.10 0.25 6.70 -39.12 -0.26 -0.01 16 5 O -0.28 -1.01 9.45 -47.35 -0.45 -1.46 16 6 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 7 C 0.52 0.72 7.91 -10.98 -0.09 0.63 16 8 O -0.50 -3.42 16.10 -14.35 -0.23 -3.65 16 9 N -0.71 1.37 5.27 -52.92 -0.28 1.09 16 10 C 0.12 -0.10 4.33 -67.02 -0.29 -0.39 16 11 H 0.11 0.13 7.47 -51.93 -0.39 -0.25 16 12 C -0.13 0.25 7.65 -25.92 -0.20 0.05 16 13 C 0.08 -0.15 5.09 -25.92 -0.13 -0.28 16 14 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 15 O -0.56 0.21 13.67 -35.23 -0.48 -0.27 16 16 C -0.18 0.21 7.72 -25.82 -0.20 0.01 16 17 C -0.17 0.10 9.04 -39.46 -0.36 -0.26 16 18 C -0.11 0.09 8.66 -39.57 -0.34 -0.25 16 19 C -0.11 -0.01 5.35 -104.61 -0.56 -0.57 16 20 C -0.07 0.04 2.80 36.01 0.10 0.14 16 21 O -0.53 -0.49 12.83 -35.23 -0.45 -0.94 16 22 Si 0.69 -1.06 29.88 -169.99 -5.08 -6.14 16 23 C -0.15 -0.19 8.67 -39.46 -0.34 -0.53 16 24 H 0.06 -0.06 7.66 -51.93 -0.40 -0.46 16 25 H 0.10 -0.11 8.14 -51.93 -0.42 -0.53 16 26 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 27 H 0.09 -0.36 7.65 -51.93 -0.40 -0.76 16 28 H 0.10 -0.38 7.67 -51.93 -0.40 -0.78 16 29 H 0.40 -2.14 8.70 -40.82 -0.36 -2.50 16 30 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 31 H 0.11 -0.12 8.14 -51.93 -0.42 -0.54 16 32 H 0.38 -1.61 9.12 45.56 0.42 -1.19 16 33 H 0.10 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 35 H 0.14 -0.52 6.30 -52.49 -0.33 -0.85 16 36 H 0.13 -0.37 4.83 -52.48 -0.25 -0.63 16 37 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 38 H 0.38 -0.69 8.70 45.56 0.40 -0.29 16 39 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 40 H -0.26 -0.03 7.01 56.52 0.40 0.37 16 41 H 0.14 0.04 6.30 -52.48 -0.33 -0.29 16 LS Contribution 346.13 15.07 5.22 5.22 Total: 0.00 -11.73 346.13 -8.45 -20.18 By element: Atomic # 1 Polarization: -7.56 SS G_CDS: -4.59 Total: -12.15 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -1.75 Total: -0.24 kcal Atomic # 7 Polarization: 1.37 SS G_CDS: -0.28 Total: 1.09 kcal Atomic # 8 Polarization: -5.99 SS G_CDS: -1.96 Total: -7.96 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.08 Total: -6.14 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -11.73 -8.45 -20.18 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_60476.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.255 kcal (2) G-P(sol) polarization free energy of solvation -11.735 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.990 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.448 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.183 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.438 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds