Wall clock time and date at job start Tue Mar 9 2021 12:58:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86305 * 109.46981 * 2 1 4 4 C 1.50695 * 109.47432 * 119.99911 * 2 1 3 5 5 C 1.38247 * 119.94115 * 244.98028 * 4 2 1 6 6 C 1.38189 * 120.06958 * 179.70175 * 5 4 2 7 7 C 1.38677 * 119.95494 * 0.57090 * 6 5 4 8 8 O 1.35915 * 120.06208 * 179.72023 * 7 6 5 9 9 C 1.42900 * 116.99680 * 359.73146 * 8 7 6 10 10 C 1.50703 * 109.47361 * 179.97438 * 9 8 7 11 11 O 1.21283 * 119.99488 * 359.97438 * 10 9 8 12 12 N 1.34777 * 120.00290 * 180.02562 * 10 9 8 13 13 C 1.46498 * 119.99828 * 180.27728 * 12 10 9 14 14 H 1.09002 * 112.85022 * 335.91707 * 13 12 10 15 15 C 1.53782 * 113.61718 * 107.22525 * 13 12 10 16 16 C 1.53774 * 87.08161 * 89.11276 * 15 13 12 17 17 H 1.09000 * 113.69696 * 270.87608 * 16 15 13 18 18 O 1.42906 * 113.61630 * 139.98060 * 16 15 13 19 19 C 1.53781 * 113.61158 * 204.72374 * 13 12 10 20 20 C 1.38835 * 119.88080 * 359.45183 * 7 6 5 21 21 Br 1.89104 * 120.03425 * 180.29480 * 20 7 6 22 22 C 1.38192 * 119.92777 * 0.27554 * 20 7 6 23 23 H 0.96699 * 114.00657 * 60.00396 * 1 2 3 24 24 H 1.09003 * 109.47369 * 240.00334 * 2 1 3 25 25 H 1.48502 * 109.99596 * 298.68201 * 3 2 1 26 26 H 1.48497 * 110.00016 * 60.00166 * 3 2 1 27 27 H 1.07994 * 119.96318 * 359.97438 * 5 4 2 28 28 H 1.08004 * 120.02398 * 180.29858 * 6 5 4 29 29 H 1.08998 * 109.47421 * 59.99636 * 9 8 7 30 30 H 1.09002 * 109.47461 * 299.99899 * 9 8 7 31 31 H 0.97001 * 119.99727 * 359.97438 * 12 10 9 32 32 H 1.08999 * 113.61704 * 203.66488 * 15 13 12 33 33 H 1.09006 * 113.61098 * 334.56706 * 15 13 12 34 34 H 0.96697 * 113.99692 * 82.50436 * 18 16 15 35 35 H 1.08995 * 113.61890 * 25.43111 * 19 13 12 36 36 H 1.09004 * 113.61421 * 156.25407 * 19 13 12 37 37 H 1.08000 * 119.97539 * 180.02562 * 22 20 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 1.2304 5 6 2.6390 -0.0110 2.1903 6 6 3.0956 -0.6584 3.3225 7 6 2.8538 -2.0136 3.4903 8 8 3.3068 -2.6537 4.6004 9 6 4.0303 -1.8700 5.5513 10 6 4.4492 -2.7423 6.7066 11 8 4.1564 -3.9192 6.7150 12 7 5.1481 -2.2144 7.7309 13 6 5.5605 -3.0638 8.8510 14 1 4.9292 -3.9445 8.9692 15 6 7.0661 -3.3763 8.8655 16 6 7.2437 -2.0973 9.7005 17 1 7.3973 -1.2003 9.1006 18 8 8.1991 -2.2300 10.7549 19 6 5.7886 -2.2894 10.1599 20 6 2.1433 -2.7141 2.5249 21 35 1.8039 -4.5604 2.7533 22 6 1.6840 -2.0606 1.3972 23 1 -0.3934 0.4416 -0.7650 24 1 1.7923 -0.5138 -0.8900 25 1 1.5877 2.4585 -1.2243 26 1 1.5614 2.4679 1.2085 27 1 2.8314 1.0433 2.0571 28 1 3.6443 -0.1103 4.0742 29 1 3.3942 -1.0640 5.9170 30 1 4.9152 -1.4470 5.0755 31 1 5.3819 -1.2730 7.7243 32 1 7.3175 -4.2890 9.4058 33 1 7.5324 -3.3237 7.8816 34 1 9.1160 -2.1102 10.4722 35 1 5.2237 -1.3593 10.2211 36 1 5.6894 -2.9046 11.0542 37 1 1.1309 -2.6047 0.6459 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12122388_6201210.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:26 Heat of formation + Delta-G solvation = -85.305081 kcal Electronic energy + Delta-G solvation = -22995.134452 eV Core-core repulsion = 19173.135766 eV Total energy + Delta-G solvation = -3821.998686 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.029 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.76260 -41.12332 -39.77906 -38.90243 -37.40092 -36.39000 -34.00482 -33.59770 -32.03327 -30.53748 -29.60877 -26.79722 -26.39092 -25.26402 -23.96037 -22.38809 -21.88397 -20.60095 -19.59022 -18.81681 -18.56765 -18.16996 -17.51843 -17.34311 -16.91813 -16.68624 -16.18961 -15.84403 -15.70683 -15.52456 -15.29862 -14.88740 -14.63346 -14.18824 -14.05052 -13.90991 -13.55225 -13.54509 -13.44743 -12.83108 -12.60542 -12.44204 -12.30497 -12.12287 -11.85280 -11.79439 -11.50338 -11.21814 -11.06325 -10.76173 -10.48701 -10.21309 -9.96979 -9.32609 -4.90174 -0.06294 0.11582 0.62787 1.32204 1.35995 1.40337 1.63815 1.97876 2.35693 2.45867 3.28508 3.34578 3.43881 3.45258 3.62938 3.64648 3.77652 3.82421 3.88344 4.01813 4.03985 4.08898 4.10189 4.27999 4.49400 4.56134 4.63773 4.72274 4.74705 4.83775 4.91816 4.93785 4.98255 5.02587 5.25068 5.43845 5.48455 6.04901 6.40647 6.59516 6.89005 7.10144 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.088 4.088 3 Si 0.775 3.225 4 C -0.114 4.114 5 C -0.058 4.058 6 C -0.188 4.188 7 C 0.149 3.851 8 O -0.305 6.305 9 C 0.033 3.967 10 C 0.515 3.485 11 O -0.568 6.568 12 N -0.692 5.692 13 C 0.118 3.882 14 H 0.084 0.916 15 C -0.180 4.180 16 C 0.083 3.917 17 H 0.110 0.890 18 O -0.581 6.581 19 C -0.132 4.132 20 C -0.145 4.145 21 Br -0.053 7.053 22 C -0.036 4.036 23 H 0.395 0.605 24 H 0.093 0.907 25 H -0.291 1.291 26 H -0.287 1.287 27 H 0.162 0.838 28 H 0.183 0.817 29 H 0.132 0.868 30 H 0.138 0.862 31 H 0.423 0.577 32 H 0.087 0.913 33 H 0.076 0.924 34 H 0.396 0.604 35 H 0.098 0.902 36 H 0.094 0.906 37 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.143 9.740 -1.539 11.618 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.196 4.196 3 Si 0.679 3.321 4 C -0.116 4.116 5 C -0.075 4.075 6 C -0.207 4.207 7 C 0.101 3.899 8 O -0.218 6.218 9 C -0.045 4.045 10 C 0.301 3.699 11 O -0.445 6.445 12 N -0.346 5.346 13 C 0.012 3.988 14 H 0.102 0.898 15 C -0.219 4.219 16 C 0.024 3.976 17 H 0.127 0.873 18 O -0.390 6.390 19 C -0.170 4.170 20 C -0.225 4.225 21 Br 0.032 6.968 22 C -0.056 4.056 23 H 0.246 0.754 24 H 0.111 0.889 25 H -0.219 1.219 26 H -0.214 1.214 27 H 0.179 0.821 28 H 0.200 0.800 29 H 0.149 0.851 30 H 0.155 0.845 31 H 0.262 0.738 32 H 0.106 0.894 33 H 0.095 0.905 34 H 0.246 0.754 35 H 0.116 0.884 36 H 0.112 0.888 37 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 5.133 8.398 -0.489 9.854 hybrid contribution -0.721 0.216 -0.900 1.173 sum 4.412 8.614 -1.389 9.778 Atomic orbital electron populations 1.86554 1.18658 1.80806 1.51046 1.25095 0.84059 1.12462 0.97998 0.94161 0.89861 0.71241 0.76789 1.19418 1.01525 0.93052 0.97569 1.21249 0.94091 1.00636 0.91551 1.21550 1.06144 0.91550 1.01482 1.18773 0.93363 0.91702 0.86064 1.86243 1.68723 1.37890 1.28926 1.22865 0.99902 0.93532 0.88160 1.20571 0.77513 0.88013 0.83810 1.90798 1.55654 1.18899 1.79169 1.45303 1.55749 1.13958 1.19609 1.21563 0.95936 0.94807 0.86462 0.89814 1.24128 0.95885 1.00412 1.01517 1.23526 0.88913 0.96775 0.88406 0.87261 1.86496 1.20750 1.94782 1.36956 1.23419 0.95052 1.01916 0.96597 1.21269 1.09768 0.92033 0.99438 1.96753 1.94975 1.07341 1.97711 1.20891 0.95544 0.94481 0.94650 0.75419 0.88915 1.21854 1.21427 0.82098 0.80017 0.85074 0.84499 0.73834 0.89405 0.90540 0.75362 0.88391 0.88764 0.84441 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.57 12.81 -148.98 -1.91 -2.48 16 2 C -0.09 0.23 2.79 71.23 0.20 0.43 16 3 Si 0.78 -4.39 29.84 68.60 2.05 -2.35 16 4 C -0.11 -0.04 5.39 -19.85 -0.11 -0.15 16 5 C -0.06 0.22 8.66 22.26 0.19 0.41 16 6 C -0.19 0.84 9.04 22.36 0.20 1.04 16 7 C 0.15 0.46 6.68 22.52 0.15 0.61 16 8 O -0.31 -1.51 9.01 -73.55 -0.66 -2.17 16 9 C 0.03 -0.18 5.22 71.24 0.37 0.19 16 10 C 0.51 0.73 7.91 87.66 0.69 1.42 16 11 O -0.57 -8.04 16.10 16.00 0.26 -7.78 16 12 N -0.69 3.90 5.26 -440.03 -2.32 1.58 16 13 C 0.12 -0.19 4.32 45.52 0.20 0.01 16 14 H 0.08 0.38 7.47 -2.39 -0.02 0.37 16 15 C -0.18 0.46 7.71 31.12 0.24 0.70 16 16 C 0.08 -0.46 5.09 31.12 0.16 -0.30 16 17 H 0.11 -1.23 8.14 -2.39 -0.02 -1.25 16 18 O -0.58 1.06 13.67 -148.98 -2.04 -0.98 16 19 C -0.13 0.57 7.66 31.12 0.24 0.81 16 20 C -0.15 -0.98 6.24 22.40 0.14 -0.84 16 21 Br -0.05 -0.54 33.16 -20.37 -0.68 -1.22 16 22 C -0.04 -0.15 9.42 22.27 0.21 0.06 16 23 H 0.40 -2.72 8.74 -74.06 -0.65 -3.37 16 24 H 0.09 -0.54 7.96 -2.39 -0.02 -0.56 16 25 H -0.29 0.13 7.11 99.48 0.71 0.84 16 26 H -0.29 0.02 7.05 99.48 0.70 0.72 16 27 H 0.16 -1.48 4.86 -2.91 -0.01 -1.50 16 28 H 0.18 -2.45 6.30 -2.91 -0.02 -2.47 16 29 H 0.13 -1.61 7.65 -2.39 -0.02 -1.63 16 30 H 0.14 -1.83 7.67 -2.39 -0.02 -1.85 16 31 H 0.42 -5.98 8.70 -92.71 -0.81 -6.79 16 32 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 33 H 0.08 -0.22 8.14 -2.38 -0.02 -0.24 16 34 H 0.40 -3.85 9.12 -74.06 -0.68 -4.53 16 35 H 0.10 -0.75 8.14 -2.39 -0.02 -0.77 16 36 H 0.09 -0.15 8.14 -2.39 -0.02 -0.16 16 37 H 0.14 0.54 8.06 -2.91 -0.02 0.51 16 Total: 0.00 -30.35 337.36 -3.36 -33.71 By element: Atomic # 1 Polarization: -21.74 SS G_CDS: -0.95 Total: -22.69 kcal Atomic # 6 Polarization: 1.49 SS G_CDS: 2.88 Total: 4.38 kcal Atomic # 7 Polarization: 3.90 SS G_CDS: -2.32 Total: 1.58 kcal Atomic # 8 Polarization: -9.06 SS G_CDS: -4.35 Total: -13.41 kcal Atomic # 14 Polarization: -4.39 SS G_CDS: 2.05 Total: -2.35 kcal Atomic # 35 Polarization: -0.54 SS G_CDS: -0.68 Total: -1.22 kcal Total: -30.35 -3.36 -33.71 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12122388_6201210.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.600 kcal (2) G-P(sol) polarization free energy of solvation -30.349 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.949 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.356 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.705 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.305 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds