Wall clock time and date at job start Tue Mar 9 2021 14:18:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.47255 * 2 1 4 4 C 1.50702 * 109.46798 * 119.99945 * 2 1 3 5 5 C 1.34456 * 126.48280 * 254.97469 * 4 2 1 6 6 N 1.36553 * 109.98553 * 180.02562 * 5 4 2 7 7 C 1.37832 * 109.86187 * 0.02562 * 6 5 4 8 8 C 1.38648 * 133.37855 * 180.32776 * 7 6 5 9 9 C 1.39323 * 119.66732 * 180.18271 * 8 7 6 10 10 C 1.47572 * 119.83406 * 179.73090 * 9 8 7 11 11 O 1.21588 * 120.00089 * 359.72291 * 10 9 8 12 12 N 1.34777 * 119.99790 * 179.72853 * 10 9 8 13 13 C 1.46505 * 119.99797 * 179.97438 * 12 10 9 14 14 H 1.08992 * 109.47276 * 325.00066 * 13 12 10 15 15 C 1.53002 * 109.46958 * 84.99979 * 13 12 10 16 16 C 1.52997 * 109.46978 * 180.02562 * 15 13 12 17 17 C 1.53006 * 109.47164 * 299.99874 * 16 15 13 18 18 H 1.08998 * 109.46505 * 299.99708 * 17 16 15 19 19 C 1.52992 * 109.47223 * 180.02562 * 17 16 15 20 20 F 1.39900 * 109.47126 * 299.99625 * 19 17 16 21 21 F 1.39906 * 109.47544 * 59.99582 * 19 17 16 22 22 F 1.39905 * 109.47115 * 179.97438 * 19 17 16 23 23 C 1.52997 * 109.47127 * 59.99836 * 17 16 15 24 24 C 1.52996 * 109.46998 * 204.99519 * 13 12 10 25 25 C 1.40202 * 120.33112 * 359.45098 * 9 8 7 26 26 C 1.36237 * 120.38019 * 0.27436 * 25 9 8 27 27 C 1.39875 * 119.96125 * 0.02562 * 26 25 9 28 28 H 0.96694 * 114.00372 * 300.00151 * 1 2 3 29 29 H 1.09005 * 109.46744 * 239.99687 * 2 1 3 30 30 H 1.48507 * 109.99816 * 299.99790 * 3 2 1 31 31 H 1.48498 * 110.00072 * 61.31536 * 3 2 1 32 32 H 1.08004 * 125.00147 * 359.97438 * 5 4 2 33 33 H 0.97000 * 125.07391 * 180.02562 * 6 5 4 34 34 H 1.08003 * 120.16900 * 359.93071 * 8 7 6 35 35 H 0.97001 * 120.00457 * 359.97438 * 12 10 9 36 36 H 1.09002 * 109.47097 * 299.99818 * 15 13 12 37 37 H 1.09001 * 109.47142 * 59.99782 * 15 13 12 38 38 H 1.09001 * 109.47375 * 59.99908 * 16 15 13 39 39 H 1.09000 * 109.47140 * 179.97438 * 16 15 13 40 40 H 1.09002 * 109.47153 * 180.02562 * 23 17 16 41 41 H 1.09001 * 109.46832 * 60.00321 * 23 17 16 42 42 H 1.09004 * 109.47368 * 60.00227 * 24 13 12 43 43 H 1.09001 * 109.47372 * 300.00383 * 24 13 12 44 44 H 1.08000 * 119.80970 * 180.29766 * 25 9 8 45 45 H 1.07999 * 120.02075 * 180.02562 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4620 -0.1363 2.3244 6 7 2.8041 -1.0947 3.2350 7 6 2.4956 -2.3432 2.7392 8 6 2.6272 -3.6276 3.2445 9 6 2.2148 -4.7157 2.4782 10 6 2.3586 -6.0847 3.0099 11 8 2.8406 -6.2613 4.1121 12 7 1.9558 -7.1393 2.2737 13 6 2.0991 -8.4985 2.8013 14 1 3.0093 -8.5628 3.3974 15 6 0.8909 -8.8354 3.6776 16 6 1.0408 -10.2546 4.2291 17 6 1.1211 -11.2474 3.0676 18 1 0.2108 -11.1835 2.4716 19 6 1.2704 -12.6666 3.6192 20 9 2.4386 -12.7490 4.3846 21 9 0.1654 -12.9744 4.4202 22 9 1.3433 -13.5744 2.5571 23 6 2.3292 -10.9105 2.1914 24 6 2.1789 -9.4908 1.6395 25 6 1.6586 -4.5161 1.2068 26 6 1.5205 -3.2570 0.7051 27 6 1.9355 -2.1549 1.4598 28 1 -0.3933 0.4417 0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 1.5616 2.4679 -1.2086 31 1 1.5879 2.4586 1.2242 32 1 2.5983 0.9262 2.4621 33 1 3.2045 -0.9226 4.1016 34 1 3.0509 -3.7842 4.2255 35 1 1.5710 -6.9985 1.3945 36 1 0.8339 -8.1285 4.5053 37 1 -0.0194 -8.7711 3.0815 38 1 1.9511 -10.3185 4.8253 39 1 0.1803 -10.4945 4.8537 40 1 2.3862 -11.6174 1.3637 41 1 3.2395 -10.9743 2.7875 42 1 3.0397 -9.2509 1.0152 43 1 1.2686 -9.4265 1.0435 44 1 1.3373 -5.3653 0.6220 45 1 1.0908 -3.1099 -0.2748 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_12335838.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:18:28 Heat of formation + Delta-G solvation = -172.026352 kcal Electronic energy + Delta-G solvation = -32841.599671 eV Core-core repulsion = 27796.169880 eV Total energy + Delta-G solvation = -5045.429791 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 369.134 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -51.03846 -48.51908 -48.49884 -42.51161 -41.14625 -39.44005 -37.96906 -37.49534 -35.56146 -33.29361 -32.09294 -31.99074 -30.74194 -30.22377 -26.74582 -26.41721 -24.62864 -24.10474 -23.63171 -22.77055 -21.51747 -21.15977 -20.84503 -19.48895 -19.23456 -19.17866 -18.63701 -18.38824 -17.87956 -17.22812 -16.95134 -16.35574 -16.16035 -15.98125 -15.71255 -15.62259 -15.50092 -15.25158 -15.14318 -15.03562 -14.89908 -14.80851 -14.73937 -14.68148 -14.66449 -14.58581 -14.44989 -13.91921 -13.80345 -13.56394 -13.43032 -13.14421 -12.68797 -12.56178 -12.50609 -12.39205 -12.19999 -12.12075 -11.82393 -11.75769 -11.53605 -10.90510 -10.78200 -10.51804 -10.12255 -9.37826 -8.84385 -5.00045 -0.28230 0.37536 1.26092 1.33675 1.51696 1.74703 1.85608 1.92683 2.00258 2.18439 2.80300 2.90902 2.93635 3.01032 3.44241 3.45929 3.55771 3.58646 3.69839 3.72705 3.79682 3.83900 3.93525 3.98818 4.07630 4.09181 4.15738 4.22597 4.29546 4.40371 4.44244 4.49843 4.54409 4.54853 4.72667 4.77777 4.78987 4.87444 4.92826 4.96706 5.06645 5.13968 5.22125 5.39520 5.41461 5.49640 5.58782 5.96320 6.32856 6.46256 6.46536 7.21843 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.037 4.037 3 Si 0.684 3.316 4 C -0.206 4.206 5 C 0.074 3.926 6 N -0.583 5.583 7 C 0.081 3.919 8 C -0.056 4.056 9 C -0.122 4.122 10 C 0.565 3.435 11 O -0.536 6.536 12 N -0.723 5.723 13 C 0.142 3.858 14 H 0.094 0.906 15 C -0.126 4.126 16 C -0.117 4.117 17 C -0.134 4.134 18 H 0.117 0.883 19 C 0.453 3.547 20 F -0.181 7.181 21 F -0.183 7.183 22 F -0.184 7.184 23 C -0.116 4.116 24 C -0.123 4.123 25 C -0.113 4.113 26 C -0.072 4.072 27 C -0.063 4.063 28 H 0.374 0.626 29 H 0.115 0.885 30 H -0.256 1.256 31 H -0.260 1.260 32 H 0.176 0.824 33 H 0.422 0.578 34 H 0.136 0.864 35 H 0.401 0.599 36 H 0.078 0.922 37 H 0.070 0.930 38 H 0.081 0.919 39 H 0.081 0.919 40 H 0.084 0.916 41 H 0.082 0.918 42 H 0.081 0.919 43 H 0.075 0.925 44 H 0.126 0.874 45 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.219 4.018 -2.585 4.931 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.148 4.148 3 Si 0.585 3.415 4 C -0.214 4.214 5 C -0.055 4.055 6 N -0.186 5.186 7 C -0.025 4.025 8 C -0.077 4.077 9 C -0.126 4.126 10 C 0.353 3.647 11 O -0.414 6.414 12 N -0.375 5.375 13 C 0.038 3.962 14 H 0.112 0.888 15 C -0.164 4.164 16 C -0.155 4.155 17 C -0.153 4.153 18 H 0.135 0.865 19 C 0.399 3.601 20 F -0.163 7.163 21 F -0.165 7.165 22 F -0.165 7.165 23 C -0.154 4.154 24 C -0.161 4.161 25 C -0.133 4.133 26 C -0.090 4.090 27 C -0.068 4.068 28 H 0.221 0.779 29 H 0.133 0.867 30 H -0.180 1.180 31 H -0.185 1.185 32 H 0.193 0.807 33 H 0.260 0.740 34 H 0.154 0.846 35 H 0.237 0.763 36 H 0.097 0.903 37 H 0.089 0.911 38 H 0.099 0.901 39 H 0.100 0.900 40 H 0.103 0.897 41 H 0.100 0.900 42 H 0.100 0.900 43 H 0.093 0.907 44 H 0.143 0.857 45 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 1.509 4.417 -2.216 5.167 hybrid contribution -1.121 -0.314 0.667 1.341 sum 0.389 4.103 -1.550 4.403 Atomic orbital electron populations 1.86609 1.18058 1.79927 1.49088 1.24291 0.83390 1.09888 0.97233 0.95169 0.91499 0.74305 0.80534 1.20670 1.10586 0.92091 0.98075 1.21823 0.99685 0.94502 0.89441 1.41724 1.54629 1.04031 1.18174 1.18087 1.03265 0.86298 0.94840 1.20079 0.99469 0.88082 1.00111 1.19422 1.05081 0.92310 0.95804 1.18157 0.77330 0.84573 0.84650 1.90799 1.44393 1.86145 1.20066 1.45930 1.64561 1.05836 1.21150 1.21054 0.99691 0.80332 0.95133 0.88796 1.21882 0.98364 0.95834 1.00328 1.21584 1.04361 0.93573 0.95967 1.22569 1.03620 0.89177 0.99952 0.86537 1.20614 0.73738 0.89773 0.75991 1.93186 1.49415 1.96925 1.76757 1.93195 1.53917 1.94396 1.74952 1.93192 1.96050 1.70675 1.56585 1.21569 0.96807 0.97358 0.99634 1.21765 1.03627 0.93273 0.97389 1.20682 1.00594 0.97328 0.94717 1.20207 0.98679 0.90471 0.99688 1.19168 1.00978 0.93031 0.93587 0.77876 0.86708 1.18045 1.18504 0.80700 0.74010 0.84633 0.76299 0.90298 0.91119 0.90066 0.90003 0.89727 0.89968 0.90048 0.90663 0.85651 0.85157 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.40 12.88 -35.23 -0.45 -0.86 16 2 C -0.04 0.03 3.06 36.01 0.11 0.14 16 3 Si 0.68 -1.49 30.82 -169.99 -5.24 -6.72 16 4 C -0.21 0.08 5.57 -102.74 -0.57 -0.49 16 5 C 0.07 -0.15 10.43 -16.79 -0.18 -0.32 16 6 N -0.58 0.94 6.07 -10.68 -0.06 0.88 16 7 C 0.08 0.07 7.26 -84.00 -0.61 -0.54 16 8 C -0.06 -0.08 9.61 -39.03 -0.37 -0.46 16 9 C -0.12 -0.15 5.87 -104.95 -0.62 -0.77 16 10 C 0.56 1.13 7.72 -12.45 -0.10 1.03 16 11 O -0.54 -2.96 15.97 5.29 0.08 -2.87 16 12 N -0.72 0.83 5.03 -54.84 -0.28 0.55 16 13 C 0.14 -0.20 2.45 -67.93 -0.17 -0.36 16 14 H 0.09 0.06 7.58 -51.93 -0.39 -0.34 16 15 C -0.13 0.17 5.49 -26.73 -0.15 0.02 16 16 C -0.12 0.18 4.96 -26.73 -0.13 0.04 16 17 C -0.13 0.26 2.16 -90.62 -0.20 0.07 16 18 H 0.12 -0.38 8.14 -51.93 -0.42 -0.80 16 19 C 0.45 0.24 2.69 37.15 0.10 0.34 16 20 F -0.18 -0.31 16.28 2.25 0.04 -0.28 16 21 F -0.18 -0.33 16.80 2.25 0.04 -0.29 16 22 F -0.18 -0.27 16.80 2.25 0.04 -0.23 16 23 C -0.12 0.31 4.96 -26.71 -0.13 0.18 16 24 C -0.12 0.42 5.39 -26.71 -0.14 0.27 16 25 C -0.11 0.05 9.46 -39.56 -0.37 -0.32 16 26 C -0.07 -0.03 10.03 -39.69 -0.40 -0.42 16 27 C -0.06 -0.07 6.35 -105.05 -0.67 -0.74 16 28 H 0.37 -0.75 8.70 45.56 0.40 -0.36 16 29 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 30 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 31 H -0.26 0.22 7.00 56.52 0.40 0.62 16 32 H 0.18 -0.82 6.27 -52.48 -0.33 -1.15 16 33 H 0.42 -1.80 8.96 -40.82 -0.37 -2.16 16 34 H 0.14 0.19 7.62 -52.48 -0.40 -0.21 16 35 H 0.40 -1.45 6.59 -40.82 -0.27 -1.71 16 36 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 37 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 38 H 0.08 -0.06 7.80 -51.93 -0.41 -0.47 16 39 H 0.08 -0.12 7.80 -51.93 -0.41 -0.52 16 40 H 0.08 -0.25 7.80 -51.93 -0.41 -0.65 16 41 H 0.08 -0.17 7.80 -51.93 -0.41 -0.57 16 42 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 43 H 0.07 -0.34 8.14 -51.93 -0.42 -0.76 16 44 H 0.13 -0.42 6.36 -52.49 -0.33 -0.75 16 45 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 LS Contribution 378.25 15.07 5.70 5.70 Total: 0.00 -8.84 378.25 -10.20 -19.03 By element: Atomic # 1 Polarization: -7.11 SS G_CDS: -5.47 Total: -12.58 kcal Atomic # 6 Polarization: 2.26 SS G_CDS: -4.59 Total: -2.33 kcal Atomic # 7 Polarization: 1.77 SS G_CDS: -0.34 Total: 1.43 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -0.37 Total: -3.73 kcal Atomic # 9 Polarization: -0.91 SS G_CDS: 0.11 Total: -0.80 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.24 Total: -6.72 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -8.84 -10.20 -19.03 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_12335838.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -152.992 kcal (2) G-P(sol) polarization free energy of solvation -8.836 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -161.828 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.198 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.034 kcal (6) G-S(sol) free energy of system = (1) + (5) -172.026 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds