Wall clock time and date at job start Tue Mar 9 2021 14:18:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86305 * 109.47213 * 2 1 4 4 C 1.50699 * 109.46895 * 119.99823 * 2 1 3 5 5 C 1.38617 * 119.83993 * 195.02342 * 4 2 1 6 6 F 1.35100 * 119.91641 * 359.95123 * 5 4 2 7 7 C 1.38115 * 120.16304 * 179.97438 * 5 4 2 8 8 C 1.39616 * 119.85174 * 359.97438 * 7 5 4 9 9 C 1.47695 * 120.15264 * 180.29974 * 8 7 5 10 10 O 1.21576 * 119.99954 * 179.72300 * 9 8 7 11 11 N 1.34780 * 120.00290 * 359.72065 * 9 8 7 12 12 C 1.46499 * 120.00136 * 180.02562 * 11 9 8 13 13 H 1.08995 * 109.47002 * 324.99630 * 12 11 9 14 14 C 1.52994 * 109.47104 * 85.00073 * 12 11 9 15 15 C 1.53005 * 109.46944 * 180.02562 * 14 12 11 16 16 C 1.52999 * 109.47050 * 299.99881 * 15 14 12 17 17 H 1.09007 * 109.47254 * 300.00051 * 16 15 14 18 18 C 1.53001 * 109.47513 * 180.02562 * 16 15 14 19 19 F 1.39907 * 109.46741 * 299.99937 * 18 16 15 20 20 F 1.39896 * 109.46976 * 59.99663 * 18 16 15 21 21 F 1.39895 * 109.47408 * 180.02562 * 18 16 15 22 22 C 1.52998 * 109.47157 * 59.99869 * 16 15 14 23 23 C 1.53000 * 109.46667 * 204.99955 * 12 11 9 24 24 C 1.39845 * 119.69031 * 0.02562 * 8 7 5 25 25 F 1.35100 * 120.07992 * 180.02562 * 24 8 7 26 26 C 1.38229 * 119.84585 * 14.99968 * 4 2 1 27 27 H 0.96703 * 113.99854 * 300.00072 * 1 2 3 28 28 H 1.08995 * 109.47310 * 239.99870 * 2 1 3 29 29 H 1.48494 * 109.99831 * 178.68408 * 3 2 1 30 30 H 1.48502 * 109.99521 * 299.99958 * 3 2 1 31 31 H 1.08004 * 120.07182 * 180.02562 * 7 5 4 32 32 H 0.97007 * 119.99447 * 359.97438 * 11 9 8 33 33 H 1.09002 * 109.47314 * 299.99435 * 14 12 11 34 34 H 1.08995 * 109.47553 * 59.99895 * 14 12 11 35 35 H 1.09002 * 109.47100 * 179.97438 * 15 14 12 36 36 H 1.08995 * 109.47141 * 59.99570 * 15 14 12 37 37 H 1.09002 * 109.47321 * 180.02562 * 22 16 15 38 38 H 1.08995 * 109.47243 * 60.00184 * 22 16 15 39 39 H 1.09000 * 109.47558 * 299.99390 * 23 12 11 40 40 H 1.09002 * 109.47338 * 59.99979 * 23 12 11 41 41 H 1.08004 * 119.92772 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 3.2561 -0.5721 1.6143 6 9 4.0923 0.1978 0.8840 7 6 3.7234 -1.2197 2.7412 8 6 2.8579 -2.0148 3.4948 9 6 3.3489 -2.7051 4.7047 10 8 2.5917 -3.3927 5.3618 11 7 4.6365 -2.5726 5.0805 12 6 5.1236 -3.2578 6.2803 13 1 4.3340 -3.2810 7.0312 14 6 5.5285 -4.6888 5.9214 15 6 6.0367 -5.4045 7.1746 16 6 7.2488 -4.6564 7.7330 17 1 8.0389 -4.6331 6.9823 18 6 7.7574 -5.3724 8.9859 19 9 6.7436 -5.4027 9.9495 20 9 8.1277 -6.6808 8.6573 21 9 8.8654 -4.6879 9.4967 22 6 6.8440 -3.2252 8.0918 23 6 6.3360 -2.5094 6.8380 24 6 1.5226 -2.1500 3.1020 25 9 0.6782 -2.9171 3.8258 26 6 1.0687 -1.4964 1.9713 27 1 -0.3933 0.4417 0.7651 28 1 1.7924 -0.5138 -0.8899 29 1 3.5346 1.7702 0.0320 30 1 1.5615 2.4678 -1.2085 31 1 4.7557 -1.1105 3.0391 32 1 5.2408 -2.0243 4.5559 33 1 4.6648 -5.2220 5.5241 34 1 6.3182 -4.6656 5.1705 35 1 6.3247 -6.4243 6.9191 36 1 5.2467 -5.4278 7.9253 37 1 7.7077 -2.6921 8.4892 38 1 6.0540 -3.2485 8.8424 39 1 7.1257 -2.4861 6.0871 40 1 6.0475 -1.4897 7.0936 41 1 0.0377 -1.5998 1.6666 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_12360598.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:18:58 Heat of formation + Delta-G solvation = -280.230046 kcal Electronic energy + Delta-G solvation = -33334.046668 eV Core-core repulsion = 27822.432672 eV Total energy + Delta-G solvation = -5511.613995 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.104 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -51.07789 -50.51694 -49.99515 -48.56109 -48.53498 -41.55678 -40.35687 -39.28479 -37.77986 -35.73114 -33.42790 -32.16510 -31.58622 -31.37145 -28.12931 -26.45290 -24.34687 -24.20053 -24.01571 -22.83964 -21.78316 -21.44907 -19.77402 -19.25897 -19.21168 -19.16179 -18.68071 -18.58058 -17.96606 -17.54410 -17.35297 -17.08936 -16.69447 -16.20372 -16.11340 -15.89284 -15.82878 -15.72838 -15.61724 -15.33841 -15.18399 -15.12903 -14.94077 -14.73110 -14.70378 -14.63662 -14.49639 -14.18854 -13.89529 -13.76893 -13.69149 -13.50945 -13.30107 -13.06088 -12.67704 -12.61263 -12.46729 -12.19281 -11.84960 -11.63538 -11.55558 -11.11029 -11.06142 -10.37508 -10.26691 -9.78165 -5.15154 -0.84267 -0.38436 1.01779 1.43835 1.54001 1.66847 1.82163 1.89246 2.25352 2.69914 2.73014 2.76974 2.87682 2.95932 2.99173 3.05787 3.32947 3.35627 3.46224 3.51264 3.68754 3.72790 3.85026 3.91369 4.00638 4.02583 4.07830 4.14990 4.21722 4.27771 4.35692 4.46801 4.52820 4.64024 4.66409 4.70251 4.71025 4.80056 4.85941 4.98381 5.03632 5.24581 5.33401 6.20068 6.24356 6.96160 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.072 4.072 3 Si 0.688 3.312 4 C -0.090 4.090 5 C 0.074 3.926 6 F -0.118 7.118 7 C -0.085 4.085 8 C -0.151 4.151 9 C 0.561 3.439 10 O -0.512 6.512 11 N -0.721 5.721 12 C 0.142 3.858 13 H 0.097 0.903 14 C -0.126 4.126 15 C -0.117 4.117 16 C -0.134 4.134 17 H 0.117 0.883 18 C 0.453 3.547 19 F -0.181 7.181 20 F -0.183 7.183 21 F -0.183 7.183 22 C -0.116 4.116 23 C -0.123 4.123 24 C 0.162 3.838 25 F -0.105 7.105 26 C -0.125 4.125 27 H 0.383 0.617 28 H 0.130 0.870 29 H -0.226 1.226 30 H -0.256 1.256 31 H 0.151 0.849 32 H 0.400 0.600 33 H 0.079 0.921 34 H 0.070 0.930 35 H 0.082 0.918 36 H 0.082 0.918 37 H 0.085 0.915 38 H 0.082 0.918 39 H 0.075 0.925 40 H 0.082 0.918 41 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.765 4.708 -1.441 5.230 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.181 4.181 3 Si 0.586 3.414 4 C -0.092 4.092 5 C 0.055 3.945 6 F -0.096 7.096 7 C -0.104 4.104 8 C -0.156 4.156 9 C 0.348 3.652 10 O -0.387 6.387 11 N -0.373 5.373 12 C 0.038 3.962 13 H 0.115 0.885 14 C -0.165 4.165 15 C -0.155 4.155 16 C -0.154 4.154 17 H 0.135 0.865 18 C 0.399 3.601 19 F -0.163 7.163 20 F -0.164 7.164 21 F -0.165 7.165 22 C -0.154 4.154 23 C -0.161 4.161 24 C 0.141 3.859 25 F -0.083 7.083 26 C -0.144 4.144 27 H 0.231 0.769 28 H 0.147 0.853 29 H -0.149 1.149 30 H -0.181 1.181 31 H 0.168 0.832 32 H 0.236 0.764 33 H 0.098 0.902 34 H 0.089 0.911 35 H 0.101 0.899 36 H 0.100 0.900 37 H 0.104 0.896 38 H 0.101 0.899 39 H 0.094 0.906 40 H 0.100 0.900 41 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 1.796 4.462 -1.890 5.167 hybrid contribution 0.564 -0.639 -0.254 0.890 sum 2.360 3.823 -2.144 4.978 Atomic orbital electron populations 1.86535 1.16428 1.81398 1.49616 1.25160 0.85814 1.10717 0.96443 0.95147 0.81899 0.75754 0.88556 1.20456 0.92208 0.98090 0.98443 1.17220 0.87983 0.96442 0.92876 1.91603 1.70825 1.71612 1.75598 1.21103 1.00539 0.95429 0.93332 1.19848 0.93446 1.03474 0.98800 1.17842 0.82305 0.81056 0.84038 1.90901 1.55361 1.38701 1.53770 1.45914 1.10535 1.51765 1.29128 1.21108 0.96828 0.91363 0.86876 0.88528 1.21884 1.02030 0.95239 0.97310 1.21582 0.95992 0.99451 0.98477 1.22571 1.01706 0.97115 0.93958 0.86531 1.20596 0.75550 0.77634 0.86319 1.93190 1.60035 1.96370 1.66664 1.93195 1.91844 1.38922 1.92462 1.93191 1.54926 1.79493 1.88872 1.21569 1.02899 0.92361 0.98555 1.21769 0.97058 0.99795 0.97430 1.17626 0.86624 0.91237 0.90376 1.91656 1.69147 1.71706 1.75789 1.20858 1.02499 0.97336 0.93710 0.76918 0.85284 1.14943 1.18111 0.83161 0.76432 0.90215 0.91082 0.89905 0.89971 0.89649 0.89885 0.90640 0.89974 0.81904 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.08 11.63 -35.23 -0.41 0.67 16 2 C -0.07 0.15 2.96 36.00 0.11 0.26 16 3 Si 0.69 -1.59 30.81 -169.99 -5.24 -6.82 16 4 C -0.09 0.17 5.14 -104.49 -0.54 -0.36 16 5 C 0.07 -0.13 6.65 -39.49 -0.26 -0.39 16 6 F -0.12 0.08 12.80 2.25 0.03 0.11 16 7 C -0.08 0.23 9.52 -39.11 -0.37 -0.15 16 8 C -0.15 0.07 5.88 -104.92 -0.62 -0.55 16 9 C 0.56 0.47 7.73 -12.40 -0.10 0.37 16 10 O -0.51 -2.51 15.00 5.30 0.08 -2.43 16 11 N -0.72 1.79 5.03 -54.80 -0.28 1.51 16 12 C 0.14 -0.34 2.45 -67.93 -0.17 -0.51 16 13 H 0.10 -0.04 7.58 -51.93 -0.39 -0.43 16 14 C -0.13 0.27 5.49 -26.73 -0.15 0.13 16 15 C -0.12 0.25 4.96 -26.73 -0.13 0.12 16 16 C -0.13 0.35 2.16 -90.62 -0.20 0.15 16 17 H 0.12 -0.45 8.14 -51.92 -0.42 -0.88 16 18 C 0.45 0.03 2.69 37.16 0.10 0.13 16 19 F -0.18 -0.24 16.28 2.25 0.04 -0.20 16 20 F -0.18 -0.26 16.80 2.25 0.04 -0.22 16 21 F -0.18 -0.19 16.80 2.25 0.04 -0.15 16 22 C -0.12 0.39 4.96 -26.70 -0.13 0.26 16 23 C -0.12 0.54 5.40 -26.70 -0.14 0.39 16 24 C 0.16 0.08 7.28 -38.97 -0.28 -0.20 16 25 F -0.11 -0.34 15.55 2.25 0.04 -0.31 16 26 C -0.13 0.19 9.20 -39.57 -0.36 -0.17 16 27 H 0.38 -2.32 8.42 45.56 0.38 -1.94 16 28 H 0.13 -0.23 7.96 -51.93 -0.41 -0.64 16 29 H -0.23 0.04 5.26 56.52 0.30 0.34 16 30 H -0.26 -0.29 7.11 56.52 0.40 0.12 16 31 H 0.15 -0.84 6.40 -52.48 -0.34 -1.18 16 32 H 0.40 -2.12 6.63 -40.82 -0.27 -2.39 16 33 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 34 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 35 H 0.08 -0.16 7.80 -51.93 -0.41 -0.57 16 36 H 0.08 -0.11 7.80 -51.93 -0.41 -0.52 16 37 H 0.08 -0.31 7.80 -51.93 -0.41 -0.71 16 38 H 0.08 -0.23 7.80 -51.93 -0.41 -0.63 16 39 H 0.07 -0.41 8.14 -51.93 -0.42 -0.84 16 40 H 0.08 -0.38 8.14 -51.93 -0.42 -0.81 16 41 H 0.16 -0.44 7.06 -52.48 -0.37 -0.81 16 LS Contribution 351.52 15.07 5.30 5.30 Total: 0.00 -7.97 351.52 -8.05 -16.02 By element: Atomic # 1 Polarization: -8.53 SS G_CDS: -4.44 Total: -12.96 kcal Atomic # 6 Polarization: 2.72 SS G_CDS: -3.24 Total: -0.52 kcal Atomic # 7 Polarization: 1.79 SS G_CDS: -0.28 Total: 1.51 kcal Atomic # 8 Polarization: -1.43 SS G_CDS: -0.33 Total: -1.76 kcal Atomic # 9 Polarization: -0.94 SS G_CDS: 0.18 Total: -0.77 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.24 Total: -6.82 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -7.97 -8.05 -16.02 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_12360598.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -264.208 kcal (2) G-P(sol) polarization free energy of solvation -7.973 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -272.180 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.050 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.022 kcal (6) G-S(sol) free energy of system = (1) + (5) -280.230 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds