Wall clock time and date at job start Tue Mar 9 2021 14:19:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86299 * 109.47416 * 2 1 4 4 C 1.50697 * 109.47452 * 120.00870 * 2 1 3 5 5 C 1.37815 * 119.93776 * 15.24959 * 4 2 1 6 6 C 1.39676 * 119.87682 * 180.23473 * 5 4 2 7 7 C 1.47725 * 120.11706 * 179.76991 * 6 5 4 8 8 O 1.21571 * 119.99860 * 359.71961 * 7 6 5 9 9 N 1.34773 * 119.99928 * 179.72301 * 7 6 5 10 10 C 1.46500 * 120.00050 * 179.97438 * 9 7 6 11 11 H 1.09001 * 109.47297 * 324.99623 * 10 9 7 12 12 C 1.52997 * 109.47007 * 85.00124 * 10 9 7 13 13 C 1.53002 * 109.46817 * 180.02562 * 12 10 9 14 14 C 1.52996 * 109.46972 * 299.99733 * 13 12 10 15 15 H 1.09000 * 109.47380 * 299.99696 * 14 13 12 16 16 C 1.53002 * 109.46969 * 180.02562 * 14 13 12 17 17 F 1.39903 * 109.47462 * 59.99716 * 16 14 13 18 18 F 1.39905 * 109.47460 * 180.02562 * 16 14 13 19 19 F 1.39902 * 109.47274 * 299.99931 * 16 14 13 20 20 C 1.52997 * 109.47131 * 60.00459 * 14 13 12 21 21 C 1.52999 * 109.46991 * 299.99311 * 20 14 13 22 22 C 1.39631 * 119.76460 * 359.49348 * 6 5 4 23 23 C 1.37867 * 119.87827 * 0.25057 * 22 6 5 24 24 C 1.38628 * 120.11630 * 0.02610 * 23 22 6 25 25 F 1.35107 * 119.87971 * 179.97438 * 24 23 22 26 26 H 0.96696 * 113.99750 * 59.99238 * 1 2 3 27 27 H 1.09008 * 109.46642 * 240.00633 * 2 1 3 28 28 H 1.48493 * 110.00543 * 298.68683 * 3 2 1 29 29 H 1.48506 * 109.99449 * 60.00612 * 3 2 1 30 30 H 1.07990 * 120.06363 * 0.02562 * 5 4 2 31 31 H 0.97002 * 119.99920 * 359.97438 * 9 7 6 32 32 H 1.09002 * 109.47153 * 299.99911 * 12 10 9 33 33 H 1.08996 * 109.46952 * 60.00083 * 12 10 9 34 34 H 1.08996 * 109.47407 * 60.00219 * 13 12 10 35 35 H 1.09000 * 109.46986 * 179.97438 * 13 12 10 36 36 H 1.09002 * 109.47153 * 179.97438 * 20 14 13 37 37 H 1.08993 * 109.47194 * 60.00154 * 20 14 13 38 38 H 1.08993 * 109.47839 * 300.00447 * 21 20 14 39 39 H 1.09000 * 109.47160 * 180.02562 * 21 20 14 40 40 H 1.07998 * 120.06157 * 180.27666 * 22 6 5 41 41 H 1.08000 * 119.93612 * 179.97438 * 23 22 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7106 1.2303 5 6 1.0744 -1.4990 1.9673 6 6 1.5402 -2.1531 3.1102 7 6 0.6249 -2.9954 3.9070 8 8 -0.5373 -3.1162 3.5713 9 7 1.0782 -3.6300 5.0062 10 6 0.1704 -4.4649 5.7968 11 1 -0.8264 -4.0238 5.7915 12 6 0.1103 -5.8684 5.1906 13 6 -0.8383 -6.7401 6.0159 14 6 -0.3278 -6.8278 7.4555 15 1 0.6688 -7.2692 7.4613 16 6 -1.2760 -7.7001 8.2806 17 9 -1.3306 -8.9834 7.7261 18 9 -0.8096 -7.7799 9.5972 19 9 -2.5555 -7.1342 8.2733 20 6 -0.2677 -5.4244 8.0617 21 6 0.6810 -4.5526 7.2365 22 6 2.8754 -2.0126 3.4936 23 6 3.7255 -1.2256 2.7460 24 6 3.2565 -0.5741 1.6159 25 9 4.0935 0.1963 0.8870 26 1 -0.3933 0.4418 -0.7650 27 1 1.7922 -0.5138 -0.8901 28 1 1.5879 2.4587 -1.2241 29 1 1.5616 2.4677 1.2087 30 1 0.0438 -1.6082 1.6638 31 1 2.0056 -3.5338 5.2739 32 1 -0.2539 -5.8059 4.1651 33 1 1.1070 -6.3094 5.1960 34 1 -1.8350 -6.2989 6.0101 35 1 -0.8815 -7.7399 5.5838 36 1 0.0956 -5.4869 9.0875 37 1 -1.2643 -4.9832 8.0560 38 1 1.6776 -4.9938 7.2422 39 1 0.7242 -3.5529 7.6686 40 1 3.2418 -2.5198 4.3739 41 1 4.7583 -1.1160 3.0420 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_12496548.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:19:04 Heat of formation + Delta-G solvation = -247.854435 kcal Electronic energy + Delta-G solvation = -30589.458700 eV Core-core repulsion = 25548.702592 eV Total energy + Delta-G solvation = -5040.756108 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.114 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -51.06268 -50.37180 -48.54534 -48.52066 -41.55619 -40.21283 -39.05933 -37.78976 -35.67125 -33.22010 -32.26648 -32.13568 -31.12826 -27.22094 -26.60191 -24.83981 -24.14943 -23.30179 -22.83208 -21.57664 -21.14987 -19.38524 -19.21987 -19.15309 -18.81256 -18.63663 -18.35922 -17.70754 -17.17240 -16.75414 -16.43995 -16.18418 -15.99326 -15.75322 -15.63820 -15.30971 -15.18081 -15.11786 -15.00627 -14.92338 -14.70914 -14.68948 -14.56885 -14.43138 -14.24249 -14.00924 -13.87330 -13.63894 -13.49161 -13.24005 -12.83896 -12.65461 -12.43872 -12.41940 -12.16509 -11.88707 -11.81001 -11.58902 -11.11912 -10.97789 -10.24929 -10.04596 -9.74372 -4.80436 -0.53243 -0.01790 1.17654 1.54269 1.66815 1.72067 1.92582 1.96862 2.57895 2.77069 2.77218 2.89752 2.97812 2.99920 3.34249 3.42043 3.51923 3.54695 3.67829 3.75548 3.86499 3.90748 3.94326 4.04085 4.08863 4.11182 4.18051 4.24139 4.39196 4.48398 4.50057 4.71896 4.73353 4.73896 4.80178 4.83009 4.88744 4.99143 5.05414 5.06202 5.11063 5.32896 5.55534 6.31865 6.35087 7.10067 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.075 4.075 3 Si 0.673 3.327 4 C -0.115 4.115 5 C -0.009 4.009 6 C -0.146 4.146 7 C 0.562 3.438 8 O -0.526 6.526 9 N -0.724 5.724 10 C 0.142 3.858 11 H 0.095 0.905 12 C -0.125 4.125 13 C -0.117 4.117 14 C -0.134 4.134 15 H 0.117 0.883 16 C 0.453 3.547 17 F -0.183 7.183 18 F -0.184 7.184 19 F -0.181 7.181 20 C -0.116 4.116 21 C -0.122 4.122 22 C -0.061 4.061 23 C -0.150 4.150 24 C 0.121 3.879 25 F -0.105 7.105 26 H 0.386 0.614 27 H 0.086 0.914 28 H -0.253 1.253 29 H -0.251 1.251 30 H 0.155 0.845 31 H 0.400 0.600 32 H 0.079 0.921 33 H 0.070 0.930 34 H 0.081 0.919 35 H 0.082 0.918 36 H 0.084 0.916 37 H 0.082 0.918 38 H 0.075 0.925 39 H 0.081 0.919 40 H 0.138 0.862 41 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.644 0.740 -0.019 6.685 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.184 4.184 3 Si 0.571 3.429 4 C -0.116 4.116 5 C -0.027 4.027 6 C -0.149 4.149 7 C 0.350 3.650 8 O -0.403 6.403 9 N -0.375 5.375 10 C 0.038 3.962 11 H 0.113 0.887 12 C -0.164 4.164 13 C -0.155 4.155 14 C -0.153 4.153 15 H 0.135 0.865 16 C 0.399 3.601 17 F -0.164 7.164 18 F -0.165 7.165 19 F -0.163 7.163 20 C -0.154 4.154 21 C -0.160 4.160 22 C -0.080 4.080 23 C -0.169 4.169 24 C 0.101 3.899 25 F -0.083 7.083 26 H 0.235 0.765 27 H 0.104 0.896 28 H -0.178 1.178 29 H -0.175 1.175 30 H 0.173 0.827 31 H 0.236 0.764 32 H 0.098 0.902 33 H 0.089 0.911 34 H 0.100 0.900 35 H 0.101 0.899 36 H 0.103 0.897 37 H 0.101 0.899 38 H 0.093 0.907 39 H 0.099 0.901 40 H 0.156 0.844 41 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 5.671 1.187 0.296 5.802 hybrid contribution -0.600 -0.286 -0.350 0.751 sum 5.071 0.901 -0.054 5.151 Atomic orbital electron populations 1.86483 1.17074 1.80610 1.50139 1.24549 0.85265 1.11160 0.97383 0.94815 0.92821 0.73776 0.81458 1.19323 0.92286 1.01201 0.98822 1.20979 1.00840 0.90229 0.90698 1.20009 0.94284 1.02358 0.98268 1.18130 0.87353 0.79130 0.80410 1.90829 1.17626 1.62764 1.69085 1.45933 1.14298 1.49721 1.27587 1.21081 0.95012 0.90564 0.89593 0.88710 1.21879 1.00059 0.94223 1.00236 1.21584 1.00468 1.01906 0.91562 1.22568 0.99578 0.96800 0.96361 0.86521 1.20609 0.80979 0.79614 0.78914 1.93195 1.96554 1.41533 1.85150 1.93193 1.88390 1.96372 1.38541 1.93188 1.42010 1.84659 1.96419 1.21559 1.01892 0.92099 0.99851 1.21753 0.99533 1.01084 0.93658 1.21164 0.91854 0.96276 0.98665 1.21030 1.01860 0.99282 0.94688 1.17593 0.87011 0.93520 0.91754 1.91193 1.69787 1.71339 1.76003 0.76529 0.89614 1.17757 1.17510 0.82716 0.76436 0.90245 0.91090 0.90031 0.89938 0.89690 0.89948 0.90654 0.90052 0.84412 0.83209 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.50 11.48 -35.23 -0.40 -0.90 16 2 C -0.07 -0.01 2.95 36.00 0.11 0.10 16 3 Si 0.67 0.03 29.57 -169.99 -5.03 -5.00 16 4 C -0.12 -0.10 5.15 -104.62 -0.54 -0.64 16 5 C -0.01 -0.02 8.90 -39.20 -0.35 -0.37 16 6 C -0.15 -0.06 5.87 -104.96 -0.62 -0.68 16 7 C 0.56 0.82 7.73 -12.39 -0.10 0.72 16 8 O -0.53 -2.89 16.01 5.30 0.08 -2.81 16 9 N -0.72 1.44 5.03 -54.79 -0.28 1.16 16 10 C 0.14 -0.27 2.45 -67.93 -0.17 -0.44 16 11 H 0.09 0.02 7.58 -51.93 -0.39 -0.37 16 12 C -0.13 0.24 5.49 -26.73 -0.15 0.09 16 13 C -0.12 0.22 4.96 -26.73 -0.13 0.09 16 14 C -0.13 0.31 2.16 -90.62 -0.20 0.12 16 15 H 0.12 -0.43 8.14 -51.93 -0.42 -0.86 16 16 C 0.45 0.12 2.69 37.16 0.10 0.22 16 17 F -0.18 -0.28 16.80 2.25 0.04 -0.24 16 18 F -0.18 -0.22 16.80 2.25 0.04 -0.18 16 19 F -0.18 -0.28 16.28 2.25 0.04 -0.25 16 20 C -0.12 0.35 4.96 -26.73 -0.13 0.22 16 21 C -0.12 0.49 5.39 -26.73 -0.14 0.34 16 22 C -0.06 0.15 9.54 -39.20 -0.37 -0.22 16 23 C -0.15 0.35 10.01 -39.57 -0.40 -0.04 16 24 C 0.12 -0.07 6.67 -39.28 -0.26 -0.34 16 25 F -0.10 0.13 13.70 2.25 0.03 0.16 16 26 H 0.39 -1.16 8.74 45.56 0.40 -0.76 16 27 H 0.09 -0.13 7.96 -51.92 -0.41 -0.55 16 28 H -0.25 -0.39 7.11 56.52 0.40 0.02 16 29 H -0.25 -0.86 7.11 56.52 0.40 -0.46 16 30 H 0.16 0.56 6.72 -52.49 -0.35 0.21 16 31 H 0.40 -1.97 6.63 -40.82 -0.27 -2.24 16 32 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 34 H 0.08 -0.08 7.80 -51.93 -0.41 -0.49 16 35 H 0.08 -0.15 7.80 -51.93 -0.41 -0.55 16 36 H 0.08 -0.28 7.80 -51.93 -0.41 -0.69 16 37 H 0.08 -0.19 7.80 -51.93 -0.41 -0.60 16 38 H 0.07 -0.39 8.14 -51.93 -0.42 -0.82 16 39 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 40 H 0.14 -0.81 6.40 -52.49 -0.34 -1.15 16 41 H 0.15 -0.72 8.06 -52.49 -0.42 -1.14 16 LS Contribution 348.84 15.07 5.26 5.26 Total: 0.00 -7.58 348.84 -8.29 -15.87 By element: Atomic # 1 Polarization: -7.52 SS G_CDS: -4.72 Total: -12.24 kcal Atomic # 6 Polarization: 2.52 SS G_CDS: -3.34 Total: -0.82 kcal Atomic # 7 Polarization: 1.44 SS G_CDS: -0.28 Total: 1.16 kcal Atomic # 8 Polarization: -3.39 SS G_CDS: -0.32 Total: -3.71 kcal Atomic # 9 Polarization: -0.65 SS G_CDS: 0.14 Total: -0.51 kcal Atomic # 14 Polarization: 0.03 SS G_CDS: -5.03 Total: -5.00 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -7.58 -8.29 -15.87 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_12496548.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -231.989 kcal (2) G-P(sol) polarization free energy of solvation -7.576 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -239.565 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.289 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.866 kcal (6) G-S(sol) free energy of system = (1) + (5) -247.854 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds