Wall clock time and date at job start Tue Mar 9 2021 14:19:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86294 * 109.47440 * 2 1 4 4 C 1.50706 * 109.46756 * 119.99823 * 2 1 3 5 5 C 1.34833 * 125.65156 * 65.00145 * 4 2 1 6 6 C 1.40803 * 107.04998 * 180.02562 * 5 4 2 7 7 C 1.36116 * 106.73016 * 359.97438 * 6 5 4 8 8 C 1.47564 * 125.94231 * 179.97438 * 7 6 5 9 9 C 1.39927 * 119.95572 * 0.03340 * 8 7 6 10 10 C 1.36426 * 120.27647 * 179.69206 * 9 8 7 11 11 C 1.39875 * 120.18555 * 0.55836 * 10 9 8 12 12 C 1.47296 * 120.04554 * 179.71350 * 11 10 9 13 13 O 1.21627 * 119.99695 * 179.72083 * 12 11 10 14 14 N 1.34781 * 119.99991 * 359.72856 * 12 11 10 15 15 C 1.46496 * 119.99775 * 180.02562 * 14 12 11 16 16 H 1.08996 * 109.47565 * 34.99894 * 15 14 12 17 17 C 1.52997 * 109.46953 * 154.99854 * 15 14 12 18 18 C 1.53006 * 109.47127 * 179.97438 * 17 15 14 19 19 C 1.52999 * 109.46626 * 299.99539 * 18 17 15 20 20 H 1.08993 * 109.47839 * 299.99931 * 19 18 17 21 21 C 1.53006 * 109.47000 * 180.02562 * 19 18 17 22 22 F 1.39903 * 109.47072 * 59.99875 * 21 19 18 23 23 F 1.39891 * 109.47280 * 180.02562 * 21 19 18 24 24 F 1.39902 * 109.46875 * 300.00573 * 21 19 18 25 25 C 1.52997 * 109.46991 * 60.00378 * 19 18 17 26 26 C 1.52996 * 109.47131 * 299.99311 * 25 19 18 27 27 C 1.40410 * 119.90819 * 359.43931 * 11 10 9 28 28 O 1.35674 * 120.13890 * 180.25344 * 27 11 10 29 29 C 1.38272 * 119.72114 * 0.27737 * 27 11 10 30 30 O 1.34230 * 125.65170 * 245.30566 * 4 2 1 31 31 H 0.96700 * 113.99977 * 300.00621 * 1 2 3 32 32 H 1.08999 * 109.47034 * 239.99254 * 2 1 3 33 33 H 1.48498 * 109.99985 * 299.99398 * 3 2 1 34 34 H 1.48494 * 110.00213 * 61.31841 * 3 2 1 35 35 H 1.07998 * 126.47660 * 0.02569 * 5 4 2 36 36 H 1.07994 * 126.63491 * 179.97438 * 6 5 4 37 37 H 1.07997 * 119.86067 * 359.96988 * 9 8 7 38 38 H 1.08005 * 119.90720 * 180.29353 * 10 9 8 39 39 H 0.97001 * 119.99650 * 359.97438 * 14 12 11 40 40 H 1.09001 * 109.47502 * 60.00124 * 17 15 14 41 41 H 1.09001 * 109.47289 * 299.99920 * 17 15 14 42 42 H 1.08993 * 109.46955 * 60.00011 * 18 17 15 43 43 H 1.09000 * 109.47050 * 179.97438 * 18 17 15 44 44 H 1.09001 * 109.47289 * 179.97438 * 25 19 18 45 45 H 1.09000 * 109.47611 * 59.99933 * 25 19 18 46 46 H 1.08996 * 109.47452 * 300.00000 * 26 25 19 47 47 H 1.09000 * 109.47054 * 180.02562 * 26 25 19 48 48 H 0.96703 * 113.99863 * 89.99408 * 28 27 11 49 49 H 1.08001 * 120.08893 * 179.97438 * 29 27 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 1.7566 -2.0180 1.5094 6 6 2.3798 -2.2627 2.7481 7 6 2.9072 -1.0782 3.1622 8 6 3.6554 -0.8537 4.4141 9 6 3.8756 -1.9170 5.2967 10 6 4.5718 -1.7182 6.4530 11 6 5.0606 -0.4465 6.7699 12 6 5.8065 -0.2340 8.0221 13 8 6.2354 0.8711 8.2943 14 7 6.0137 -1.2641 8.8662 15 6 6.7550 -1.0526 10.1119 16 1 6.5316 -0.0603 10.5037 17 6 6.3421 -2.1106 11.1370 18 6 7.1168 -1.8901 12.4378 19 6 8.6176 -2.0045 12.1632 20 1 8.8407 -2.9968 11.7712 21 6 9.3924 -1.7847 13.4641 22 9 9.0146 -2.7525 14.4011 23 9 10.7646 -1.8887 13.2129 24 9 9.1061 -0.5113 13.9678 25 6 9.0305 -0.9465 11.1380 26 6 8.2559 -1.1670 9.8373 27 6 4.8442 0.6260 5.8898 28 8 5.3206 1.8604 6.1900 29 6 4.1431 0.4190 4.7162 30 8 2.6216 -0.1451 2.2333 31 1 -0.3933 0.4418 0.7650 32 1 1.7923 -0.5139 -0.8899 33 1 1.5617 2.4678 -1.2085 34 1 1.5880 2.4585 1.2242 35 1 1.2369 -2.7410 0.8982 36 1 2.4296 -3.2075 3.2688 37 1 3.4967 -2.9001 5.0595 38 1 4.7424 -2.5441 7.1277 39 1 5.6713 -2.1453 8.6491 40 1 6.5656 -3.1029 10.7452 41 1 5.2728 -2.0295 11.3323 42 1 6.8937 -0.8979 12.8298 43 1 6.8223 -2.6436 13.1683 44 1 10.0998 -1.0277 10.9427 45 1 8.8076 0.0458 11.5300 46 1 8.4789 -2.1592 9.4452 47 1 8.5504 -0.4135 9.1068 48 1 6.2140 2.0282 5.8599 49 1 3.9729 1.2398 4.0352 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12301704_12807986.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:19:23 Heat of formation + Delta-G solvation = -222.343960 kcal Electronic energy + Delta-G solvation = -38547.539769 eV Core-core repulsion = 32799.763430 eV Total energy + Delta-G solvation = -5747.776340 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 412.138 amu Computer time = 1.45 seconds Orbital eigenvalues (eV) -51.11823 -48.60980 -48.59623 -43.73900 -41.65732 -40.29237 -38.94922 -38.20299 -37.86525 -35.54254 -34.25179 -33.54644 -31.92477 -31.63374 -31.17908 -30.27877 -27.26387 -26.26761 -24.47857 -24.05877 -23.93562 -22.98491 -22.33227 -21.81350 -21.36298 -21.16206 -19.76727 -19.35351 -19.26074 -18.76980 -18.60033 -18.52303 -17.69890 -17.54826 -17.45873 -16.64686 -16.44596 -16.28784 -16.01888 -15.82798 -15.77365 -15.64203 -15.43196 -15.12350 -15.04322 -14.94782 -14.76625 -14.76494 -14.72674 -14.49509 -14.43901 -14.28601 -13.97455 -13.79933 -13.72107 -13.59919 -13.50376 -13.45774 -13.26722 -12.96501 -12.70587 -12.47933 -12.20987 -12.20083 -12.07429 -11.85736 -11.61178 -11.42051 -11.12596 -10.87877 -10.84633 -10.62054 -10.10057 -9.94033 -9.00828 -5.00200 -0.78003 0.15926 0.65050 1.12263 1.43727 1.45380 1.69716 1.76774 1.87925 1.94580 2.06069 2.65998 2.81836 2.96474 3.02930 3.04501 3.21046 3.36867 3.58052 3.62077 3.66403 3.71110 3.87418 3.91810 3.99954 4.01382 4.09112 4.11772 4.23998 4.24550 4.28717 4.37841 4.40589 4.44275 4.58217 4.65187 4.71447 4.73188 4.80356 4.87932 4.92027 4.98495 5.06038 5.07241 5.08373 5.11385 5.21236 5.23112 5.26976 5.43920 5.47885 5.55624 5.96410 6.30466 6.51344 6.70923 7.20720 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.033 4.033 3 Si 0.763 3.237 4 C -0.052 4.052 5 C -0.181 4.181 6 C -0.172 4.172 7 C 0.005 3.995 8 C 0.024 3.976 9 C -0.110 4.110 10 C -0.050 4.050 11 C -0.179 4.179 12 C 0.556 3.444 13 O -0.563 6.563 14 N -0.708 5.708 15 C 0.142 3.858 16 H 0.065 0.935 17 C -0.112 4.112 18 C -0.116 4.116 19 C -0.123 4.123 20 H 0.140 0.860 21 C 0.447 3.553 22 F -0.189 7.189 23 F -0.192 7.192 24 F -0.193 7.193 25 C -0.115 4.115 26 C -0.117 4.117 27 C 0.159 3.841 28 O -0.496 6.496 29 C -0.155 4.155 30 O -0.177 6.177 31 H 0.389 0.611 32 H 0.158 0.842 33 H -0.281 1.281 34 H -0.298 1.298 35 H 0.167 0.833 36 H 0.183 0.817 37 H 0.170 0.830 38 H 0.175 0.825 39 H 0.416 0.584 40 H 0.101 0.899 41 H 0.086 0.914 42 H 0.068 0.932 43 H 0.093 0.907 44 H 0.082 0.918 45 H 0.065 0.935 46 H 0.091 0.909 47 H 0.056 0.944 48 H 0.408 0.592 49 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.031 -8.930 -3.078 9.446 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.142 4.142 3 Si 0.668 3.332 4 C -0.102 4.102 5 C -0.200 4.200 6 C -0.190 4.190 7 C -0.044 4.044 8 C 0.024 3.976 9 C -0.128 4.128 10 C -0.068 4.068 11 C -0.183 4.183 12 C 0.344 3.656 13 O -0.442 6.442 14 N -0.360 5.360 15 C 0.038 3.962 16 H 0.083 0.917 17 C -0.150 4.150 18 C -0.154 4.154 19 C -0.143 4.143 20 H 0.158 0.842 21 C 0.393 3.607 22 F -0.171 7.171 23 F -0.173 7.173 24 F -0.175 7.175 25 C -0.153 4.153 26 C -0.156 4.156 27 C 0.113 3.887 28 O -0.310 6.310 29 C -0.173 4.173 30 O -0.075 6.075 31 H 0.239 0.761 32 H 0.175 0.825 33 H -0.207 1.207 34 H -0.225 1.225 35 H 0.185 0.815 36 H 0.200 0.800 37 H 0.187 0.813 38 H 0.193 0.807 39 H 0.255 0.745 40 H 0.119 0.881 41 H 0.105 0.895 42 H 0.087 0.913 43 H 0.112 0.888 44 H 0.100 0.900 45 H 0.084 0.916 46 H 0.110 0.890 47 H 0.074 0.926 48 H 0.269 0.731 49 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -0.211 -7.233 -3.095 7.870 hybrid contribution -0.560 0.138 0.582 0.819 sum -0.771 -7.095 -2.513 7.566 Atomic orbital electron populations 1.86637 1.17263 1.80341 1.50041 1.24459 0.83504 1.11914 0.94345 0.93666 0.90506 0.72183 0.76883 1.23153 1.00775 0.94215 0.92073 1.21844 1.03984 0.95745 0.98429 1.22252 1.00765 0.98960 0.97073 1.20606 1.04581 0.87875 0.91384 1.17961 0.95400 0.93965 0.90293 1.21069 0.99282 0.99365 0.93042 1.21192 0.93774 0.95134 0.96685 1.20547 1.05529 0.95305 0.96878 1.18221 0.79200 0.84354 0.83776 1.90832 1.51951 1.25408 1.76034 1.45801 1.56815 1.12368 1.21050 1.21037 0.91053 1.00271 0.83874 0.91713 1.21707 1.01054 0.99373 0.92872 1.21579 0.90685 1.04091 0.99067 1.22596 0.96813 1.05150 0.89701 0.84198 1.21067 0.78200 0.73360 0.88072 1.93176 1.91045 1.63773 1.69058 1.93170 1.34154 1.95806 1.94214 1.93164 1.93270 1.41620 1.89419 1.21536 1.01377 0.97901 0.94510 1.21786 0.93887 1.03460 0.96418 1.18505 0.94704 0.84211 0.91316 1.84731 1.37289 1.28611 1.80331 1.21560 1.01121 0.97667 0.96965 1.83937 1.58207 1.38488 1.26887 0.76078 0.82455 1.20715 1.22518 0.81540 0.79975 0.81262 0.80744 0.74545 0.88061 0.89511 0.91289 0.88821 0.89953 0.91623 0.89048 0.92568 0.73148 0.84649 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.25 12.88 -148.98 -1.92 -2.17 16 2 C -0.03 0.07 2.98 71.24 0.21 0.28 16 3 Si 0.76 -0.71 32.11 68.60 2.20 1.49 16 4 C -0.05 -0.01 6.20 24.91 0.15 0.14 16 5 C -0.18 0.21 10.78 22.11 0.24 0.44 16 6 C -0.17 0.44 10.26 22.40 0.23 0.67 16 7 C 0.00 0.00 7.02 24.24 0.17 0.17 16 8 C 0.02 -0.01 5.87 -20.08 -0.12 -0.13 16 9 C -0.11 0.72 9.48 22.26 0.21 0.93 16 10 C -0.05 0.36 9.47 22.24 0.21 0.57 16 11 C -0.18 -0.09 5.89 -19.97 -0.12 -0.20 16 12 C 0.56 1.72 7.72 86.62 0.67 2.39 16 13 O -0.56 -6.84 14.80 16.88 0.25 -6.59 16 14 N -0.71 3.55 5.03 -445.92 -2.24 1.31 16 15 C 0.14 -0.60 2.45 44.99 0.11 -0.49 16 16 H 0.06 0.15 7.58 -2.39 -0.02 0.13 16 17 C -0.11 1.09 5.39 30.60 0.16 1.26 16 18 C -0.12 0.80 4.96 30.60 0.15 0.96 16 19 C -0.12 0.69 2.16 -10.79 -0.02 0.67 16 20 H 0.14 -1.40 8.14 -2.39 -0.02 -1.42 16 21 C 0.45 0.24 2.69 71.98 0.19 0.43 16 22 F -0.19 -0.40 16.80 44.97 0.76 0.36 16 23 F -0.19 -0.60 16.80 44.97 0.76 0.15 16 24 F -0.19 -0.79 16.28 44.97 0.73 -0.06 16 25 C -0.12 0.42 4.96 30.59 0.15 0.58 16 26 C -0.12 0.52 5.49 30.59 0.17 0.69 16 27 C 0.16 0.66 6.71 22.81 0.15 0.81 16 28 O -0.50 -3.47 11.56 -68.93 -0.80 -4.27 16 29 C -0.15 -0.38 9.65 22.61 0.22 -0.17 16 30 O -0.18 -0.48 8.79 -5.99 -0.05 -0.53 16 31 H 0.39 -1.62 8.70 -74.06 -0.64 -2.26 16 32 H 0.16 -0.96 7.96 -2.39 -0.02 -0.98 16 33 H -0.28 -1.25 7.11 99.48 0.71 -0.54 16 34 H -0.30 -1.83 7.11 99.48 0.71 -1.13 16 35 H 0.17 -0.65 8.06 -2.91 -0.02 -0.67 16 36 H 0.18 -1.63 7.24 -2.91 -0.02 -1.65 16 37 H 0.17 -2.18 6.95 -2.91 -0.02 -2.20 16 38 H 0.18 -2.73 6.38 -2.91 -0.02 -2.75 16 39 H 0.42 -5.17 6.61 -92.71 -0.61 -5.79 16 40 H 0.10 -1.45 8.14 -2.39 -0.02 -1.47 16 41 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 42 H 0.07 -0.27 7.80 -2.39 -0.02 -0.29 16 43 H 0.09 -0.76 7.80 -2.39 -0.02 -0.78 16 44 H 0.08 -0.30 7.80 -2.39 -0.02 -0.32 16 45 H 0.06 -0.03 7.80 -2.39 -0.02 -0.05 16 46 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 47 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 48 H 0.41 -0.10 9.06 -74.06 -0.67 -0.77 16 49 H 0.14 0.39 7.90 -2.91 -0.02 0.36 16 Total: 0.00 -26.55 417.75 2.01 -24.54 By element: Atomic # 1 Polarization: -23.40 SS G_CDS: -0.83 Total: -24.23 kcal Atomic # 6 Polarization: 6.84 SS G_CDS: 3.15 Total: 9.99 kcal Atomic # 7 Polarization: 3.55 SS G_CDS: -2.24 Total: 1.31 kcal Atomic # 8 Polarization: -11.05 SS G_CDS: -2.52 Total: -13.56 kcal Atomic # 9 Polarization: -1.79 SS G_CDS: 2.24 Total: 0.45 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: 2.20 Total: 1.49 kcal Total: -26.55 2.01 -24.54 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_12807986.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -197.801 kcal (2) G-P(sol) polarization free energy of solvation -26.549 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -224.350 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.006 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.543 kcal (6) G-S(sol) free energy of system = (1) + (5) -222.344 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.45 seconds