Wall clock time and date at job start Tue Mar 9 2021 14:19:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.39283 * 121.03049 * 2 1 4 4 C 1.46502 * 134.20457 * 359.97438 * 3 2 1 5 5 C 1.50697 * 126.59532 * 0.03048 * 4 3 2 6 6 O 1.42903 * 109.47266 * 74.99855 * 5 4 3 7 7 Si 1.86305 * 109.46978 * 194.99821 * 5 4 3 8 8 C 1.34177 * 106.80070 * 180.02562 * 4 3 2 9 9 N 1.36946 * 109.95408 * 359.97438 * 8 4 3 10 10 C 1.37150 * 110.11236 * 0.02562 * 9 8 4 11 11 N 1.32824 * 132.95930 * 179.97438 * 10 9 8 12 12 C 1.31313 * 121.88749 * 179.73313 * 11 10 9 13 13 C 1.39750 * 121.03271 * 180.02562 * 2 1 3 14 14 C 1.47665 * 120.45503 * 359.97438 * 13 2 1 15 15 O 1.21583 * 120.00024 * 354.23228 * 14 13 2 16 16 N 1.34778 * 120.00489 * 174.23736 * 14 13 2 17 17 C 1.46500 * 120.00273 * 179.97438 * 16 14 13 18 18 H 1.09008 * 109.46835 * 35.00135 * 17 16 14 19 19 C 1.52994 * 109.46870 * 155.00144 * 17 16 14 20 20 C 1.53003 * 109.47152 * 180.02562 * 19 17 16 21 21 C 1.53000 * 109.47345 * 300.00302 * 20 19 17 22 22 H 1.08999 * 109.46408 * 300.00036 * 21 20 19 23 23 C 1.52998 * 109.47433 * 179.97438 * 21 20 19 24 24 F 1.39905 * 109.46887 * 59.99643 * 23 21 20 25 25 F 1.39892 * 109.46915 * 179.97438 * 23 21 20 26 26 F 1.39903 * 109.47187 * 300.00158 * 23 21 20 27 27 C 1.53003 * 109.47058 * 59.99351 * 21 20 19 28 28 C 1.52998 * 109.47339 * 275.00259 * 17 16 14 29 29 H 1.09006 * 109.47131 * 263.75759 * 1 2 3 30 30 H 1.08996 * 109.47549 * 23.76089 * 1 2 3 31 31 H 1.09004 * 109.47126 * 143.76185 * 1 2 3 32 32 H 1.09006 * 109.47094 * 314.99491 * 5 4 3 33 33 H 0.96694 * 113.99509 * 59.99791 * 6 5 4 34 34 H 1.48504 * 109.99673 * 58.67869 * 7 5 4 35 35 H 1.48497 * 109.99869 * 179.97438 * 7 5 4 36 36 H 1.07997 * 125.01819 * 180.02562 * 8 4 3 37 37 H 0.97000 * 124.93937 * 180.02562 * 9 8 4 38 38 H 1.08001 * 119.30993 * 180.26599 * 12 11 10 39 39 H 0.97001 * 119.99632 * 359.72447 * 16 14 13 40 40 H 1.08999 * 109.47075 * 300.00112 * 19 17 16 41 41 H 1.08996 * 109.47723 * 60.00323 * 19 17 16 42 42 H 1.09008 * 109.46857 * 59.99804 * 20 19 17 43 43 H 1.08998 * 109.47577 * 179.97438 * 20 19 17 44 44 H 1.09004 * 109.46705 * 60.00631 * 27 21 20 45 45 H 1.09001 * 109.46905 * 179.97438 * 27 21 20 46 46 H 1.08997 * 109.47433 * 299.99975 * 28 17 16 47 47 H 1.09007 * 109.46978 * 60.00071 * 28 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8516 2.6101 -0.0005 5 6 0.4527 3.1705 -0.0005 6 8 -0.1190 3.0244 1.3010 7 14 0.5071 4.9763 -0.4557 8 6 2.9948 3.3125 -0.0008 9 7 4.0669 2.4604 0.0000 10 6 3.6347 1.1588 0.0003 11 7 4.2720 -0.0066 0.0006 12 6 3.6266 -1.1502 0.0061 13 6 2.2274 -1.1975 -0.0005 14 6 1.5226 -2.4950 -0.0005 15 8 0.3119 -2.5292 0.1057 16 7 2.2212 -3.6416 -0.1183 17 6 1.5219 -4.9289 -0.1177 18 1 0.5600 -4.8201 -0.6190 19 6 2.3671 -5.9687 -0.8561 20 6 1.6365 -7.3130 -0.8561 21 6 1.4104 -7.7706 0.5862 22 1 2.3720 -7.8797 1.0877 23 6 0.6793 -9.1146 0.5863 24 9 1.4517 -10.0657 -0.0891 25 9 0.4731 -9.5332 1.9051 26 9 -0.5550 -8.9741 -0.0573 27 6 0.5652 -6.7307 1.3247 28 6 1.2963 -5.3862 1.3248 29 1 -0.3634 -0.1117 1.0216 30 1 -0.3634 0.9405 -0.4140 31 1 -0.3633 -0.8289 -0.6075 32 1 -0.1549 2.6308 -0.7270 33 1 0.3709 3.4801 1.9991 34 1 1.1288 5.1441 -1.7939 35 1 -0.8664 5.5406 -0.4599 36 1 3.0599 4.3905 -0.0007 37 1 4.9966 2.7372 0.0004 38 1 4.1869 -2.0735 0.0105 39 1 3.1867 -3.6142 -0.2070 40 1 2.5278 -5.6429 -1.8838 41 1 3.3289 -6.0775 -0.3549 42 1 0.6748 -7.2039 -1.3576 43 1 2.2384 -8.0537 -1.3825 44 1 -0.3964 -6.6217 0.8231 45 1 0.4037 -7.0570 2.3521 46 1 2.2581 -5.4950 1.8261 47 1 0.6941 -4.6453 1.8509 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_12890568.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:19:28 Heat of formation + Delta-G solvation = -156.289311 kcal Electronic energy + Delta-G solvation = -35836.084912 eV Core-core repulsion = 30570.374000 eV Total energy + Delta-G solvation = -5265.710911 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.145 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -51.03638 -48.51744 -48.49638 -42.86564 -41.21119 -39.63158 -38.57512 -37.74460 -35.77657 -34.83561 -32.31605 -32.08528 -31.83829 -30.47620 -28.81525 -26.77570 -26.22460 -24.65717 -24.09973 -23.97344 -22.82184 -21.68021 -21.31732 -20.67531 -19.36619 -19.25057 -19.18240 -18.77137 -18.56594 -17.76096 -17.56293 -17.15268 -16.65898 -16.51181 -16.20663 -15.79915 -15.67144 -15.52240 -15.45466 -15.27837 -15.13276 -15.00893 -14.89582 -14.67985 -14.66399 -14.63233 -14.53804 -14.14937 -14.00329 -13.86098 -13.68934 -13.59869 -13.49622 -13.40489 -13.21080 -12.99934 -12.58329 -12.39309 -12.29685 -12.10639 -12.02281 -11.75770 -11.52778 -11.12791 -11.04288 -10.45104 -10.20659 -10.10211 -9.60890 -9.14878 -5.14665 -0.24515 -0.07335 1.21984 1.35735 1.55023 1.62883 1.75955 1.90805 1.93381 2.04826 2.80323 2.83261 2.93357 3.01257 3.25174 3.42315 3.48078 3.50505 3.57876 3.60101 3.69803 3.75220 3.80808 3.93118 3.98965 4.06898 4.09119 4.14929 4.21700 4.23545 4.26564 4.37908 4.45811 4.54842 4.63299 4.74962 4.77954 4.79993 4.87564 4.93369 4.97289 5.03428 5.08959 5.13719 5.18884 5.35753 5.41411 5.55365 5.75899 6.07941 6.44032 6.59906 6.83486 7.22243 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C 0.085 3.915 3 C -0.150 4.150 4 C -0.181 4.181 5 C -0.036 4.036 6 O -0.537 6.537 7 Si 0.685 3.315 8 C 0.069 3.931 9 N -0.570 5.570 10 C 0.308 3.692 11 N -0.504 5.504 12 C 0.181 3.819 13 C -0.235 4.235 14 C 0.573 3.427 15 O -0.527 6.527 16 N -0.726 5.726 17 C 0.144 3.856 18 H 0.094 0.906 19 C -0.123 4.123 20 C -0.116 4.116 21 C -0.134 4.134 22 H 0.117 0.883 23 C 0.453 3.547 24 F -0.184 7.184 25 F -0.183 7.183 26 F -0.181 7.181 27 C -0.117 4.117 28 C -0.125 4.125 29 H 0.088 0.912 30 H 0.067 0.933 31 H 0.096 0.904 32 H 0.116 0.884 33 H 0.378 0.622 34 H -0.255 1.255 35 H -0.252 1.252 36 H 0.186 0.814 37 H 0.426 0.574 38 H 0.162 0.838 39 H 0.399 0.601 40 H 0.080 0.920 41 H 0.075 0.925 42 H 0.081 0.919 43 H 0.084 0.916 44 H 0.081 0.919 45 H 0.081 0.919 46 H 0.070 0.930 47 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.566 4.716 0.549 7.316 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.077 3.923 3 C -0.157 4.157 4 C -0.188 4.188 5 C -0.147 4.147 6 O -0.342 6.342 7 Si 0.586 3.414 8 C -0.057 4.057 9 N -0.175 5.175 10 C 0.075 3.925 11 N -0.217 5.217 12 C 0.012 3.988 13 C -0.242 4.242 14 C 0.361 3.639 15 O -0.404 6.404 16 N -0.378 5.378 17 C 0.039 3.961 18 H 0.113 0.887 19 C -0.161 4.161 20 C -0.154 4.154 21 C -0.153 4.153 22 H 0.135 0.865 23 C 0.399 3.601 24 F -0.165 7.165 25 F -0.164 7.164 26 F -0.163 7.163 27 C -0.155 4.155 28 C -0.164 4.164 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.115 0.885 32 H 0.133 0.867 33 H 0.225 0.775 34 H -0.180 1.180 35 H -0.177 1.177 36 H 0.203 0.797 37 H 0.264 0.736 38 H 0.179 0.821 39 H 0.234 0.766 40 H 0.099 0.901 41 H 0.093 0.907 42 H 0.100 0.900 43 H 0.102 0.898 44 H 0.099 0.901 45 H 0.100 0.900 46 H 0.089 0.911 47 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 4.995 5.103 -0.291 7.147 hybrid contribution 0.182 -0.821 -0.174 0.859 sum 5.177 4.282 -0.465 6.735 Atomic orbital electron populations 1.21176 0.88734 1.03556 1.04405 1.19929 0.97142 0.89203 0.86041 1.19475 0.92810 0.93575 1.09802 1.20688 0.95354 0.91089 1.11702 1.24514 0.90392 1.10580 0.89233 1.86535 1.53599 1.77916 1.16124 0.95325 0.84454 0.76719 0.84869 1.21726 0.84975 0.95797 1.03190 1.41513 1.09623 1.02705 1.63703 1.18493 0.89331 0.85900 0.98815 1.66439 1.40569 0.96021 1.18702 1.22499 0.90072 0.94438 0.91807 1.20420 0.94752 0.93733 1.15318 1.17876 0.86843 0.83234 0.75942 1.90768 1.13483 1.87010 1.49177 1.45935 1.10700 1.05509 1.75611 1.21043 0.97137 0.81684 0.96203 0.88749 1.21757 0.99012 0.93610 1.01708 1.21560 1.02788 0.97559 0.93470 1.22571 1.01301 0.90415 1.01026 0.86536 1.20616 0.77977 0.88061 0.73472 1.93192 1.75003 1.67812 1.80518 1.93192 1.95203 1.91731 1.36322 1.93187 1.45304 1.95916 1.81876 1.21594 0.98978 0.93624 1.01296 1.21888 1.01357 0.96273 0.96866 0.89369 0.91435 0.88516 0.86662 0.77528 1.17966 1.17680 0.79712 0.73570 0.82110 0.76598 0.90097 0.90652 0.89985 0.89759 0.90059 0.90007 0.91133 0.90211 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.34 8.69 36.00 0.31 -0.03 16 2 C 0.09 0.24 5.98 -103.67 -0.62 -0.38 16 3 C -0.15 -0.33 6.16 -105.13 -0.65 -0.98 16 4 C -0.18 0.04 5.57 -102.73 -0.57 -0.53 16 5 C -0.04 0.03 2.06 36.00 0.07 0.10 16 6 O -0.54 0.16 12.88 -35.23 -0.45 -0.29 16 7 Si 0.69 -1.65 30.77 -169.99 -5.23 -6.88 16 8 C 0.07 -0.18 10.44 -16.70 -0.17 -0.35 16 9 N -0.57 0.80 6.04 -12.12 -0.07 0.73 16 10 C 0.31 0.56 8.42 -155.71 -1.31 -0.75 16 11 N -0.50 -1.06 10.37 -11.96 -0.12 -1.19 16 12 C 0.18 0.08 10.67 -17.11 -0.18 -0.11 16 13 C -0.23 -0.40 5.89 -104.82 -0.62 -1.02 16 14 C 0.57 0.95 7.68 -12.41 -0.10 0.86 16 15 O -0.53 -2.43 13.15 5.29 0.07 -2.36 16 16 N -0.73 1.15 5.03 -54.81 -0.28 0.88 16 17 C 0.14 -0.25 2.45 -67.93 -0.17 -0.42 16 18 H 0.09 0.02 7.58 -51.92 -0.39 -0.38 16 19 C -0.12 0.45 5.39 -26.73 -0.14 0.30 16 20 C -0.12 0.32 4.96 -26.73 -0.13 0.19 16 21 C -0.13 0.28 2.17 -90.62 -0.20 0.08 16 22 H 0.12 -0.39 8.14 -51.93 -0.42 -0.82 16 23 C 0.45 0.22 2.69 37.16 0.10 0.32 16 24 F -0.18 -0.27 16.80 2.25 0.04 -0.23 16 25 F -0.18 -0.32 16.80 2.25 0.04 -0.28 16 26 F -0.18 -0.31 16.28 2.25 0.04 -0.27 16 27 C -0.12 0.20 4.96 -26.71 -0.13 0.06 16 28 C -0.13 0.21 5.50 -26.71 -0.15 0.06 16 29 H 0.09 0.31 8.14 -51.93 -0.42 -0.12 16 30 H 0.07 0.14 5.06 -51.93 -0.26 -0.12 16 31 H 0.10 0.37 5.94 -51.93 -0.31 0.06 16 32 H 0.12 0.03 6.05 -51.93 -0.31 -0.28 16 33 H 0.38 -1.60 8.70 45.56 0.40 -1.20 16 34 H -0.26 -0.01 7.11 56.52 0.40 0.39 16 35 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 36 H 0.19 -1.22 6.36 -52.49 -0.33 -1.55 16 37 H 0.43 -1.69 8.96 -40.82 -0.37 -2.05 16 38 H 0.16 -0.53 6.43 -52.49 -0.34 -0.86 16 39 H 0.40 -1.65 6.68 -40.82 -0.27 -1.92 16 40 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 41 H 0.07 -0.36 8.14 -51.93 -0.42 -0.78 16 42 H 0.08 -0.17 7.80 -51.92 -0.41 -0.58 16 43 H 0.08 -0.25 7.80 -51.93 -0.41 -0.66 16 44 H 0.08 -0.07 7.80 -51.93 -0.41 -0.48 16 45 H 0.08 -0.13 7.80 -51.93 -0.41 -0.53 16 46 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 47 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 LS Contribution 383.81 15.07 5.78 5.78 Total: 0.00 -9.85 383.81 -10.39 -20.24 By element: Atomic # 1 Polarization: -7.98 SS G_CDS: -5.55 Total: -13.53 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: -4.65 Total: -2.60 kcal Atomic # 7 Polarization: 0.89 SS G_CDS: -0.47 Total: 0.42 kcal Atomic # 8 Polarization: -2.27 SS G_CDS: -0.38 Total: -2.66 kcal Atomic # 9 Polarization: -0.90 SS G_CDS: 0.11 Total: -0.78 kcal Atomic # 14 Polarization: -1.65 SS G_CDS: -5.23 Total: -6.88 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -9.85 -10.39 -20.24 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_12890568.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -136.051 kcal (2) G-P(sol) polarization free energy of solvation -9.850 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.900 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.389 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.239 kcal (6) G-S(sol) free energy of system = (1) + (5) -156.289 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds