Wall clock time and date at job start Tue Mar 9 2021 14:19:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.34658 * 124.85265 * 2 1 4 4 C 1.36766 * 108.40114 * 180.14695 * 3 2 1 5 5 C 1.47256 * 126.94642 * 179.83233 * 4 3 2 6 6 O 1.21633 * 120.00315 * 179.68245 * 5 4 3 7 7 N 1.34777 * 120.00032 * 359.68981 * 5 4 3 8 8 C 1.46500 * 120.00075 * 179.97438 * 7 5 4 9 9 H 1.09002 * 109.47092 * 324.99806 * 8 7 5 10 10 C 1.52997 * 109.47007 * 84.99755 * 8 7 5 11 11 C 1.52999 * 109.47317 * 179.97438 * 10 8 7 12 12 C 1.53005 * 109.47159 * 300.00546 * 11 10 8 13 13 H 1.09002 * 109.46935 * 299.99411 * 12 11 10 14 14 C 1.53002 * 109.46982 * 179.97438 * 12 11 10 15 15 F 1.39895 * 109.47045 * 299.99654 * 14 12 11 16 16 F 1.39898 * 109.47122 * 59.99891 * 14 12 11 17 17 F 1.39897 * 109.46937 * 179.97438 * 14 12 11 18 18 C 1.52997 * 109.47452 * 59.99536 * 12 11 10 19 19 C 1.53000 * 109.47023 * 204.99547 * 8 7 5 20 20 C 1.46695 * 106.11330 * 359.57336 * 4 3 2 21 21 C 1.34491 * 106.33164 * 0.26176 * 20 4 3 22 22 C 1.50692 * 125.57346 * 179.97438 * 21 20 4 23 23 O 1.42895 * 109.47648 * 210.02319 * 22 21 20 24 24 Si 1.86299 * 109.47122 * 330.02876 * 22 21 20 25 25 H 1.08996 * 109.47469 * 270.34288 * 1 2 3 26 26 H 1.09004 * 109.46957 * 30.34413 * 1 2 3 27 27 H 1.09002 * 109.46936 * 150.33704 * 1 2 3 28 28 H 1.08000 * 125.80290 * 0.02562 * 3 2 1 29 29 H 0.96997 * 119.99651 * 359.97438 * 7 5 4 30 30 H 1.08996 * 109.47853 * 300.00060 * 10 8 7 31 31 H 1.09002 * 109.47153 * 60.00089 * 10 8 7 32 32 H 1.09000 * 109.47486 * 180.02562 * 11 10 8 33 33 H 1.09002 * 109.46716 * 60.00091 * 11 10 8 34 34 H 1.08993 * 109.47194 * 179.97438 * 18 12 11 35 35 H 1.09002 * 109.46695 * 59.99734 * 18 12 11 36 36 H 1.08992 * 109.47399 * 300.00063 * 19 8 7 37 37 H 1.09004 * 109.46724 * 60.00549 * 19 8 7 38 38 H 1.07991 * 126.83667 * 180.29930 * 20 4 3 39 39 H 1.09008 * 109.46746 * 90.02226 * 22 21 20 40 40 H 0.96693 * 114.00318 * 179.97438 * 23 22 21 41 41 H 1.48502 * 110.00163 * 178.68050 * 24 22 21 42 42 H 1.48504 * 109.99743 * 299.99472 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2345 1.1050 0.0000 4 6 3.5462 0.7177 -0.0033 5 6 4.7283 1.5957 -0.0080 6 8 5.8447 1.1128 -0.0048 7 7 4.5734 2.9345 -0.0156 8 6 5.7494 3.8081 -0.0197 9 1 6.5426 3.3523 0.5730 10 6 6.2349 4.0031 -1.4574 11 6 7.4628 4.9159 -1.4618 12 6 7.0916 6.2729 -0.8603 13 1 6.2983 6.7283 -1.4530 14 6 8.3197 7.1854 -0.8641 15 9 9.3375 6.6007 -0.1030 16 9 8.7641 7.3638 -2.1786 17 9 7.9803 8.4263 -0.3146 18 6 6.6062 6.0779 0.5775 19 6 5.3788 5.1651 0.5819 20 6 3.5375 -0.7492 0.0050 21 6 2.2447 -1.1198 0.0067 22 6 1.7397 -2.5395 0.0141 23 8 0.4812 -2.6011 -0.6600 24 14 2.9654 -3.6391 -0.8573 25 1 -0.3634 0.0061 1.0276 26 1 -0.3633 0.8869 -0.5192 27 1 -0.3633 -0.8930 -0.5086 28 1 1.8768 2.1241 0.0004 29 1 3.6831 3.3197 -0.0185 30 1 6.4989 3.0364 -1.8862 31 1 5.4417 4.4589 -2.0501 32 1 7.8084 5.0552 -2.4861 33 1 8.2561 4.4604 -0.8691 34 1 6.3423 7.0446 1.0061 35 1 7.3996 5.6224 1.1702 36 1 4.5857 5.6209 -0.0107 37 1 5.0330 5.0261 1.6063 38 1 4.3980 -1.4017 0.0096 39 1 1.6174 -2.8763 1.0436 40 1 0.0962 -3.4874 -0.6939 41 1 2.4944 -5.0472 -0.8291 42 1 3.1412 -3.1905 -2.2620 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12301704_13287730.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:19:50 Heat of formation + Delta-G solvation = -178.699588 kcal Electronic energy + Delta-G solvation = -28937.768971 eV Core-core repulsion = 24276.728229 eV Total energy + Delta-G solvation = -4661.040743 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.134 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -51.10761 -48.59775 -48.58455 -42.39182 -40.75151 -39.03381 -37.86748 -35.42762 -33.72962 -32.11994 -31.90423 -30.86603 -27.65887 -26.59874 -25.86056 -24.01329 -23.71987 -22.46684 -21.37607 -20.87806 -20.22995 -19.30864 -19.24234 -18.63654 -18.53167 -18.45484 -17.15622 -16.88134 -16.64215 -16.05601 -15.75496 -15.63864 -15.51770 -15.44516 -15.09576 -15.05535 -14.92369 -14.75326 -14.74946 -14.68204 -14.56285 -14.40507 -13.92304 -13.66382 -13.55555 -13.28607 -13.23707 -13.18285 -13.01315 -12.52612 -12.43796 -12.18922 -12.08637 -12.04088 -11.57788 -11.38989 -10.94678 -10.79477 -10.06505 -9.53217 -9.13890 -4.89352 0.77612 1.02485 1.49631 1.57482 1.78336 1.88799 2.07271 2.29454 2.60063 2.83655 2.97783 3.05849 3.09118 3.62464 3.67194 3.69349 3.92429 3.94564 4.00170 4.10030 4.14995 4.27018 4.29406 4.36591 4.40339 4.42403 4.49261 4.49842 4.63456 4.75374 4.83031 4.93788 4.99843 5.00625 5.05756 5.08671 5.09647 5.25491 5.31656 5.57878 5.70751 6.02465 6.26112 6.51528 6.70339 7.40371 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.053 3.947 2 N -0.428 5.428 3 C 0.068 3.932 4 C -0.260 4.260 5 C 0.590 3.410 6 O -0.591 6.591 7 N -0.712 5.712 8 C 0.143 3.857 9 H 0.066 0.934 10 C -0.118 4.118 11 C -0.114 4.114 12 C -0.124 4.124 13 H 0.138 0.862 14 C 0.448 3.552 15 F -0.192 7.192 16 F -0.192 7.192 17 F -0.189 7.189 18 C -0.115 4.115 19 C -0.111 4.111 20 C -0.161 4.161 21 C 0.013 3.987 22 C -0.044 4.044 23 O -0.551 6.551 24 Si 0.763 3.237 25 H 0.083 0.917 26 H 0.100 0.900 27 H 0.107 0.893 28 H 0.209 0.791 29 H 0.413 0.587 30 H 0.052 0.948 31 H 0.087 0.913 32 H 0.080 0.920 33 H 0.067 0.933 34 H 0.094 0.906 35 H 0.070 0.930 36 H 0.097 0.903 37 H 0.087 0.913 38 H 0.155 0.845 39 H 0.102 0.898 40 H 0.399 0.601 41 H -0.271 1.271 42 H -0.311 1.311 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.998 0.321 2.363 9.308 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 N -0.101 5.101 3 C -0.069 4.069 4 C -0.270 4.270 5 C 0.380 3.620 6 O -0.473 6.473 7 N -0.363 5.363 8 C 0.039 3.961 9 H 0.084 0.916 10 C -0.157 4.157 11 C -0.153 4.153 12 C -0.143 4.143 13 H 0.156 0.844 14 C 0.394 3.606 15 F -0.174 7.174 16 F -0.174 7.174 17 F -0.170 7.170 18 C -0.153 4.153 19 C -0.149 4.149 20 C -0.185 4.185 21 C -0.097 4.097 22 C -0.154 4.154 23 O -0.363 6.363 24 Si 0.668 3.332 25 H 0.101 0.899 26 H 0.119 0.881 27 H 0.125 0.875 28 H 0.226 0.774 29 H 0.250 0.750 30 H 0.071 0.929 31 H 0.105 0.895 32 H 0.099 0.901 33 H 0.086 0.914 34 H 0.112 0.888 35 H 0.089 0.911 36 H 0.116 0.884 37 H 0.106 0.894 38 H 0.172 0.828 39 H 0.120 0.880 40 H 0.252 0.748 41 H -0.197 1.197 42 H -0.239 1.239 Dipole moment (debyes) X Y Z Total from point charges -8.334 0.035 1.661 8.498 hybrid contribution -0.799 -0.085 -0.334 0.870 sum -9.133 -0.050 1.327 9.229 Atomic orbital electron populations 1.22639 0.74750 1.06654 1.04621 1.43730 1.08141 1.04776 1.53463 1.22433 0.89100 0.93211 1.02191 1.20313 0.92294 0.93769 1.20640 1.17621 0.87640 0.82278 0.74490 1.90756 1.27605 1.76176 1.52735 1.45693 1.10427 1.04696 1.75499 1.20994 0.88067 0.90704 0.96355 0.91605 1.21794 0.97616 0.99189 0.97108 1.21532 0.98904 0.92754 1.02061 1.22594 0.93769 0.95574 1.02362 0.84384 1.21031 0.86436 0.80278 0.72860 1.93163 1.63735 1.84013 1.76442 1.93171 1.91107 1.95728 1.37380 1.93173 1.92177 1.45791 1.85868 1.21570 0.98941 1.01951 0.92870 1.21680 0.97976 0.92214 1.02983 1.21751 0.95197 0.93847 1.07719 1.19899 0.90171 0.88118 1.11484 1.24372 0.92545 0.95995 1.02470 1.86380 1.33941 1.36332 1.79646 0.93499 0.85723 0.74649 0.79359 0.89883 0.88103 0.87470 0.77417 0.74956 0.92927 0.89472 0.90117 0.91436 0.88794 0.91092 0.88441 0.89397 0.82771 0.87987 0.74805 1.19688 1.23898 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.33 10.71 127.77 1.37 1.04 16 2 N -0.43 0.24 3.09 -533.25 -1.65 -1.41 16 3 C 0.07 -0.14 10.83 83.91 0.91 0.77 16 4 C -0.26 -1.22 6.29 -19.04 -0.12 -1.34 16 5 C 0.59 4.20 7.77 86.61 0.67 4.87 16 6 O -0.59 -9.70 16.63 -4.13 -0.07 -9.77 16 7 N -0.71 1.15 5.07 -445.95 -2.26 -1.11 16 8 C 0.14 -0.23 2.45 44.99 0.11 -0.11 16 9 H 0.07 0.29 7.58 -2.39 -0.02 0.28 16 10 C -0.12 0.15 5.49 30.59 0.17 0.32 16 11 C -0.11 0.18 4.96 30.60 0.15 0.33 16 12 C -0.12 0.49 2.17 -10.79 -0.02 0.47 16 13 H 0.14 -1.12 8.14 -2.39 -0.02 -1.14 16 14 C 0.45 0.74 2.69 71.98 0.19 0.94 16 15 F -0.19 -0.95 16.28 44.97 0.73 -0.22 16 16 F -0.19 -0.84 16.80 44.97 0.76 -0.08 16 17 F -0.19 -0.56 16.80 44.97 0.76 0.19 16 18 C -0.12 0.64 4.96 30.58 0.15 0.79 16 19 C -0.11 0.87 5.39 30.58 0.16 1.03 16 20 C -0.16 -0.91 9.49 23.62 0.22 -0.69 16 21 C 0.01 0.03 6.17 40.98 0.25 0.28 16 22 C -0.04 0.10 2.97 71.23 0.21 0.31 16 23 O -0.55 1.86 9.69 -148.98 -1.44 0.41 16 24 Si 0.76 -0.60 31.12 68.60 2.13 1.54 16 25 H 0.08 -0.68 8.14 -2.39 -0.02 -0.70 16 26 H 0.10 -1.03 8.13 -2.38 -0.02 -1.05 16 27 H 0.11 -0.46 5.13 -2.39 -0.01 -0.47 16 28 H 0.21 -2.38 7.45 -2.91 -0.02 -2.40 16 29 H 0.41 -3.67 7.55 -92.71 -0.70 -4.37 16 30 H 0.05 0.25 8.14 -2.39 -0.02 0.23 16 31 H 0.09 -0.43 8.14 -2.39 -0.02 -0.45 16 32 H 0.08 -0.11 7.80 -2.39 -0.02 -0.13 16 33 H 0.07 0.09 7.80 -2.39 -0.02 0.07 16 34 H 0.09 -0.66 7.80 -2.39 -0.02 -0.68 16 35 H 0.07 -0.21 7.80 -2.39 -0.02 -0.23 16 36 H 0.10 -1.16 8.14 -2.39 -0.02 -1.18 16 37 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 38 H 0.15 0.72 6.89 -2.91 -0.02 0.70 16 39 H 0.10 -0.65 7.96 -2.38 -0.02 -0.67 16 40 H 0.40 -4.39 8.74 -74.06 -0.65 -5.04 16 41 H -0.27 -0.35 7.11 99.48 0.71 0.36 16 42 H -0.31 -2.84 7.11 99.48 0.71 -2.13 16 Total: 0.00 -24.39 351.51 3.16 -21.23 By element: Atomic # 1 Polarization: -19.55 SS G_CDS: -0.23 Total: -19.79 kcal Atomic # 6 Polarization: 4.57 SS G_CDS: 4.44 Total: 9.01 kcal Atomic # 7 Polarization: 1.38 SS G_CDS: -3.91 Total: -2.52 kcal Atomic # 8 Polarization: -7.85 SS G_CDS: -1.51 Total: -9.36 kcal Atomic # 9 Polarization: -2.35 SS G_CDS: 2.24 Total: -0.10 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: 2.13 Total: 1.54 kcal Total: -24.39 3.16 -21.23 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_13287730.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -157.474 kcal (2) G-P(sol) polarization free energy of solvation -24.388 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -181.861 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.162 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.226 kcal (6) G-S(sol) free energy of system = (1) + (5) -178.700 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds