Wall clock time and date at job start Tue Mar 9 2021 14:20:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.37874 * 126.45888 * 2 1 4 4 C 1.46673 * 126.23038 * 0.04226 * 3 2 1 5 5 O 1.21694 * 120.00278 * 0.02562 * 4 3 2 6 6 N 1.34787 * 120.00042 * 180.02562 * 4 3 2 7 7 C 1.46498 * 120.00133 * 179.97438 * 6 4 3 8 8 H 1.09004 * 109.46991 * 325.00053 * 7 6 4 9 9 C 1.53003 * 109.47013 * 84.99769 * 7 6 4 10 10 C 1.53005 * 109.47136 * 180.02562 * 9 7 6 11 11 C 1.53006 * 109.46986 * 300.00466 * 10 9 7 12 12 H 1.09003 * 109.46517 * 299.99776 * 11 10 9 13 13 C 1.52997 * 109.47180 * 179.97438 * 11 10 9 14 14 F 1.39905 * 109.46994 * 300.00073 * 13 11 10 15 15 F 1.39902 * 109.47226 * 59.99620 * 13 11 10 16 16 F 1.39898 * 109.47406 * 179.97438 * 13 11 10 17 17 C 1.52999 * 109.47227 * 59.99690 * 11 10 9 18 18 C 1.52995 * 109.47399 * 205.00142 * 7 6 4 19 19 N 1.37650 * 107.53539 * 180.02562 * 3 2 1 20 20 C 1.35531 * 108.64554 * 0.02562 * 19 3 2 21 21 C 1.50699 * 125.56565 * 179.97438 * 20 19 3 22 22 O 1.42898 * 109.46964 * 299.99898 * 21 20 19 23 23 Si 1.86301 * 109.47146 * 179.97438 * 21 20 19 24 24 C 1.35457 * 108.87250 * 0.22659 * 20 19 3 25 25 H 1.09009 * 109.46939 * 89.99790 * 1 2 3 26 26 H 1.09000 * 109.47172 * 209.99260 * 1 2 3 27 27 H 1.08998 * 109.47461 * 329.99596 * 1 2 3 28 28 H 0.96997 * 119.99745 * 0.02562 * 6 4 3 29 29 H 1.09001 * 109.46938 * 299.99949 * 9 7 6 30 30 H 1.08995 * 109.46775 * 60.00237 * 9 7 6 31 31 H 1.08991 * 109.47167 * 180.02562 * 10 9 7 32 32 H 1.08999 * 109.46920 * 59.99480 * 10 9 7 33 33 H 1.09000 * 109.47033 * 179.97438 * 17 11 10 34 34 H 1.09004 * 109.47093 * 60.00057 * 17 11 10 35 35 H 1.09004 * 109.46977 * 299.99920 * 18 7 6 36 36 H 1.09000 * 109.47370 * 59.99770 * 18 7 6 37 37 H 0.97000 * 125.67550 * 179.97438 * 19 3 2 38 38 H 1.09002 * 109.46959 * 59.99868 * 21 20 19 39 39 H 0.96698 * 113.99898 * 299.99550 * 22 21 20 40 40 H 1.48503 * 110.00152 * 180.02562 * 23 21 20 41 41 H 1.48498 * 110.00118 * 301.32243 * 23 21 20 42 42 H 1.07991 * 126.07119 * 179.77709 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8898 2.5092 0.0009 5 8 0.7026 2.7766 0.0022 6 7 2.8037 3.4999 0.0002 7 6 2.3678 4.8986 0.0005 8 1 1.4556 4.9949 -0.5883 9 6 2.0970 5.3480 1.4378 10 6 1.6411 6.8086 1.4381 11 6 2.7367 7.6849 0.8274 12 1 3.6490 7.5889 1.4162 13 6 2.2806 9.1453 0.8271 14 9 1.1098 9.2680 0.0712 15 9 2.0326 9.5567 2.1411 16 9 3.2825 9.9467 0.2693 17 6 3.0075 7.2354 -0.6098 18 6 3.4637 5.7745 -0.6098 19 7 3.6284 0.6625 -0.0006 20 6 3.6218 -0.6928 -0.0015 21 6 4.8434 -1.5753 -0.0029 22 8 5.6232 -1.3073 -1.1701 23 14 4.3183 -3.3627 -0.0030 24 6 2.3379 -1.1247 -0.0066 25 1 -0.3633 0.0000 -1.0278 26 1 -0.3633 -0.8900 0.5137 27 1 -0.3634 0.8899 0.5139 28 1 3.7500 3.2868 -0.0012 29 1 1.3162 4.7240 1.8725 30 1 3.0092 5.2516 2.0265 31 1 1.4486 7.1289 2.4619 32 1 0.7289 6.9045 0.8493 33 1 3.7876 7.8600 -1.0449 34 1 2.0951 7.3313 -1.1985 35 1 4.3759 5.6781 -0.0210 36 1 3.6567 5.4543 -1.6337 37 1 4.4190 1.2244 -0.0011 38 1 5.4394 -1.3721 0.8868 39 1 5.1550 -1.4668 -2.0010 40 1 5.5140 -4.2434 -0.0038 41 1 3.4802 -3.6460 1.1897 42 1 2.0136 -2.1548 -0.0119 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_13940406.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:20:27 Heat of formation + Delta-G solvation = -195.492827 kcal Electronic energy + Delta-G solvation = -29157.267536 eV Core-core repulsion = 24495.498584 eV Total energy + Delta-G solvation = -4661.768952 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.134 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -51.07936 -48.56066 -48.53797 -42.62917 -40.87262 -39.19395 -37.83546 -35.72266 -33.55004 -32.28473 -32.15747 -31.09061 -28.17586 -27.32047 -26.02822 -24.18981 -23.37451 -22.18374 -21.64364 -21.48858 -20.40904 -19.58517 -19.25680 -19.19997 -18.66281 -18.15848 -17.40531 -16.83027 -16.40564 -16.22040 -15.72742 -15.68178 -15.44665 -15.29803 -15.19508 -15.05110 -14.94107 -14.73619 -14.70720 -14.65626 -14.56205 -14.42938 -14.00682 -13.81009 -13.69181 -13.52094 -13.48508 -13.47886 -12.93696 -12.68090 -12.46890 -12.22186 -12.14805 -12.04614 -11.83567 -11.61520 -11.01041 -10.77063 -10.26566 -9.84736 -9.18880 -5.09118 0.33282 1.08006 1.49396 1.60889 1.70301 1.81175 1.95173 2.11934 2.32859 2.75454 2.87649 2.95924 3.23461 3.39153 3.47424 3.51054 3.72529 3.73700 3.86558 3.92541 4.01536 4.08336 4.12446 4.14942 4.16423 4.32131 4.37154 4.47098 4.69843 4.70796 4.71822 4.80082 4.81823 4.86290 4.99607 5.00202 5.05231 5.19225 5.27114 5.42668 5.61971 5.87649 6.19721 6.32416 6.38768 7.09761 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 C -0.063 4.063 3 C -0.058 4.058 4 C 0.592 3.408 5 O -0.519 6.519 6 N -0.731 5.731 7 C 0.144 3.856 8 H 0.096 0.904 9 C -0.125 4.125 10 C -0.117 4.117 11 C -0.134 4.134 12 H 0.116 0.884 13 C 0.453 3.547 14 F -0.181 7.181 15 F -0.183 7.183 16 F -0.183 7.183 17 C -0.116 4.116 18 C -0.123 4.123 19 N -0.524 5.524 20 C 0.027 3.973 21 C -0.055 4.055 22 O -0.544 6.544 23 Si 0.721 3.279 24 C -0.201 4.201 25 H 0.070 0.930 26 H 0.065 0.935 27 H 0.081 0.919 28 H 0.394 0.606 29 H 0.079 0.921 30 H 0.068 0.932 31 H 0.082 0.918 32 H 0.082 0.918 33 H 0.084 0.916 34 H 0.083 0.917 35 H 0.073 0.927 36 H 0.080 0.920 37 H 0.416 0.584 38 H 0.115 0.885 39 H 0.383 0.617 40 H -0.253 1.253 41 H -0.253 1.253 42 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.978 -3.098 -1.806 4.662 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.071 4.071 3 C -0.171 4.171 4 C 0.380 3.620 5 O -0.395 6.395 6 N -0.381 5.381 7 C 0.040 3.960 8 H 0.114 0.886 9 C -0.164 4.164 10 C -0.155 4.155 11 C -0.153 4.153 12 H 0.134 0.866 13 C 0.399 3.601 14 F -0.162 7.162 15 F -0.164 7.164 16 F -0.165 7.165 17 C -0.154 4.154 18 C -0.160 4.160 19 N -0.121 5.121 20 C -0.092 4.092 21 C -0.165 4.165 22 O -0.349 6.349 23 Si 0.621 3.379 24 C -0.226 4.226 25 H 0.089 0.911 26 H 0.084 0.916 27 H 0.099 0.901 28 H 0.227 0.773 29 H 0.098 0.902 30 H 0.087 0.913 31 H 0.101 0.899 32 H 0.101 0.899 33 H 0.103 0.897 34 H 0.101 0.899 35 H 0.092 0.908 36 H 0.099 0.901 37 H 0.254 0.746 38 H 0.132 0.868 39 H 0.231 0.769 40 H -0.178 1.178 41 H -0.177 1.177 42 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 2.676 -3.331 -0.935 4.374 hybrid contribution 1.138 1.141 0.410 1.663 sum 3.814 -2.190 -0.525 4.429 Atomic orbital electron populations 1.20398 0.88820 1.03229 1.02616 1.19948 0.96056 0.90339 1.00766 1.20220 0.83549 0.93498 1.19802 1.17028 0.85869 0.82947 0.76151 1.90847 1.15837 1.83103 1.49670 1.45944 1.09276 1.06211 1.76719 1.21063 0.98850 0.79212 0.96898 0.88561 1.21881 1.02549 0.95244 0.96714 1.21584 0.97340 0.94215 1.02338 1.22570 1.02712 0.88638 1.01422 0.86591 1.20593 0.75289 0.90691 0.73512 1.93190 1.49810 1.96780 1.76455 1.93196 1.94352 1.92128 1.36751 1.93192 1.61014 1.76782 1.85501 1.21566 1.03692 0.96465 0.93642 1.21763 0.98170 0.93836 1.02278 1.41839 1.07116 1.06567 1.56552 1.21098 0.96842 0.83323 1.07894 1.24964 0.91236 1.09042 0.91296 1.86496 1.41525 1.91271 1.15629 0.93987 0.82267 0.72860 0.88832 1.20618 0.90804 0.99124 1.12025 0.91092 0.91645 0.90057 0.77295 0.90184 0.91291 0.89935 0.89949 0.89703 0.89875 0.90823 0.90111 0.74648 0.86752 0.76854 1.17811 1.17682 0.83217 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.12 9.83 36.00 0.35 0.24 16 2 C -0.06 -0.10 6.21 -104.16 -0.65 -0.74 16 3 C -0.06 -0.06 7.06 -81.98 -0.58 -0.64 16 4 C 0.59 0.91 7.75 -12.85 -0.10 0.81 16 5 O -0.52 -2.47 14.46 5.19 0.08 -2.39 16 6 N -0.73 1.26 5.07 -55.11 -0.28 0.98 16 7 C 0.14 -0.27 2.45 -67.93 -0.17 -0.43 16 8 H 0.10 0.01 7.58 -51.93 -0.39 -0.39 16 9 C -0.13 0.22 5.49 -26.73 -0.15 0.07 16 10 C -0.12 0.21 4.96 -26.73 -0.13 0.08 16 11 C -0.13 0.30 2.17 -90.62 -0.20 0.10 16 12 H 0.12 -0.40 8.14 -51.93 -0.42 -0.83 16 13 C 0.45 0.14 2.69 37.16 0.10 0.24 16 14 F -0.18 -0.27 16.28 2.25 0.04 -0.23 16 15 F -0.18 -0.29 16.80 2.25 0.04 -0.25 16 16 F -0.18 -0.23 16.80 2.25 0.04 -0.20 16 17 C -0.12 0.34 4.96 -26.71 -0.13 0.21 16 18 C -0.12 0.46 5.39 -26.71 -0.14 0.31 16 19 N -0.52 0.69 5.99 -5.70 -0.03 0.66 16 20 C 0.03 -0.03 6.47 -81.95 -0.53 -0.56 16 21 C -0.06 0.11 3.08 36.01 0.11 0.22 16 22 O -0.54 1.01 12.88 -35.23 -0.45 0.56 16 23 Si 0.72 -1.80 30.54 -169.99 -5.19 -6.99 16 24 C -0.20 0.02 9.27 -39.97 -0.37 -0.35 16 25 H 0.07 0.06 8.14 -51.92 -0.42 -0.36 16 26 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 27 H 0.08 0.24 6.48 -51.93 -0.34 -0.10 16 28 H 0.39 -1.66 7.73 -40.82 -0.32 -1.97 16 29 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 31 H 0.08 -0.14 7.80 -51.93 -0.41 -0.55 16 32 H 0.08 -0.09 7.80 -51.93 -0.41 -0.50 16 33 H 0.08 -0.27 7.80 -51.93 -0.41 -0.67 16 34 H 0.08 -0.20 7.80 -51.93 -0.41 -0.60 16 35 H 0.07 -0.35 8.14 -51.93 -0.42 -0.77 16 36 H 0.08 -0.31 8.14 -51.93 -0.42 -0.74 16 37 H 0.42 -1.52 8.19 -40.82 -0.33 -1.86 16 38 H 0.12 -0.22 7.96 -51.93 -0.41 -0.63 16 39 H 0.38 -2.02 8.70 45.56 0.40 -1.62 16 40 H -0.25 -0.15 7.11 56.52 0.40 0.25 16 41 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 42 H 0.15 -0.29 6.17 -52.49 -0.32 -0.62 16 LS Contribution 351.83 15.07 5.30 5.30 Total: 0.00 -7.45 351.83 -8.55 -16.00 By element: Atomic # 1 Polarization: -7.51 SS G_CDS: -5.50 Total: -13.00 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -2.58 Total: -0.43 kcal Atomic # 7 Polarization: 1.96 SS G_CDS: -0.31 Total: 1.64 kcal Atomic # 8 Polarization: -1.45 SS G_CDS: -0.38 Total: -1.83 kcal Atomic # 9 Polarization: -0.80 SS G_CDS: 0.11 Total: -0.68 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: -5.19 Total: -6.99 kcal Total LS contribution 5.30 Total: 5.30 kcal Total: -7.45 -8.55 -16.00 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_13940406.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -179.494 kcal (2) G-P(sol) polarization free energy of solvation -7.451 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -186.945 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.548 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.999 kcal (6) G-S(sol) free energy of system = (1) + (5) -195.493 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds