Wall clock time and date at job start Tue Mar 9 2021 14:20:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.46974 * 2 1 4 4 C 1.50701 * 109.47417 * 120.00123 * 2 1 3 5 5 C 1.34849 * 125.89155 * 245.02927 * 4 2 1 6 6 C 1.40885 * 107.42015 * 180.02562 * 5 4 2 7 7 C 1.34856 * 107.41313 * 359.97438 * 6 5 4 8 8 C 1.50705 * 125.88797 * 180.02562 * 7 6 5 9 9 C 1.50696 * 109.47151 * 84.97772 * 8 7 6 10 10 O 1.21282 * 119.99884 * 359.97438 * 9 8 7 11 11 N 1.34776 * 120.00125 * 179.97438 * 9 8 7 12 12 C 1.46498 * 120.00102 * 180.02562 * 11 9 8 13 13 H 1.09000 * 109.47312 * 324.99627 * 12 11 9 14 14 C 1.52999 * 109.47066 * 85.00151 * 12 11 9 15 15 C 1.52998 * 109.46800 * 180.02562 * 14 12 11 16 16 C 1.53001 * 109.47194 * 299.99408 * 15 14 12 17 17 H 1.09006 * 109.47361 * 300.00307 * 16 15 14 18 18 C 1.53007 * 109.47311 * 180.02562 * 16 15 14 19 19 F 1.39907 * 109.46815 * 300.00356 * 18 16 15 20 20 F 1.39900 * 109.46980 * 59.99788 * 18 16 15 21 21 F 1.39897 * 109.47085 * 180.02562 * 18 16 15 22 22 C 1.52999 * 109.47135 * 60.00522 * 16 15 14 23 23 C 1.53004 * 109.46906 * 204.99964 * 12 11 9 24 24 N 1.36335 * 108.22112 * 359.73935 * 7 6 5 25 25 H 0.96708 * 114.00101 * 299.99304 * 1 2 3 26 26 H 1.09002 * 109.46984 * 240.00143 * 2 1 3 27 27 H 1.48493 * 110.00101 * 300.00094 * 3 2 1 28 28 H 1.48502 * 109.99925 * 61.32089 * 3 2 1 29 29 H 1.08002 * 126.28871 * 0.02562 * 5 4 2 30 30 H 1.08001 * 126.29542 * 180.02562 * 6 5 4 31 31 H 1.08998 * 109.46800 * 204.97822 * 8 7 6 32 32 H 1.09008 * 109.47081 * 324.97637 * 8 7 6 33 33 H 0.97001 * 119.99630 * 359.97438 * 11 9 8 34 34 H 1.08998 * 109.46735 * 299.99743 * 14 12 11 35 35 H 1.08992 * 109.47501 * 59.99909 * 14 12 11 36 36 H 1.09008 * 109.47017 * 180.02562 * 15 14 12 37 37 H 1.08999 * 109.47848 * 59.99946 * 15 14 12 38 38 H 1.09001 * 109.47587 * 180.02562 * 22 16 15 39 39 H 1.08998 * 109.47190 * 59.99340 * 22 16 15 40 40 H 1.09006 * 109.47268 * 299.99796 * 23 12 11 41 41 H 1.08998 * 109.47297 * 60.00212 * 23 12 11 42 42 H 0.96998 * 125.63907 * 180.25880 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6297 -0.1486 2.2379 6 6 2.8981 -1.1605 3.1808 7 6 2.3529 -2.3021 2.7137 8 6 2.3939 -3.6448 3.3969 9 6 1.2625 -3.7388 4.3880 10 8 0.4985 -2.8071 4.5262 11 7 1.0997 -4.8582 5.1206 12 6 -0.0005 -4.9498 6.0837 13 1 -0.1724 -3.9718 6.5330 14 6 -1.2700 -5.4114 5.3652 15 6 -2.4191 -5.5064 6.3709 16 6 -2.0575 -6.5132 7.4648 17 1 -1.8857 -7.4916 7.0158 18 6 -3.2069 -6.6088 8.4702 19 9 -3.4279 -5.3532 9.0465 20 9 -4.3675 -7.0309 7.8129 21 9 -2.8761 -7.5289 9.4707 22 6 -0.7880 -6.0518 8.1833 23 6 0.3615 -5.9569 7.1772 24 7 1.7529 -2.0308 1.5199 25 1 -0.3934 0.4416 0.7652 26 1 1.7923 -0.5138 -0.8900 27 1 1.5614 2.4679 -1.2084 28 1 1.5878 2.4585 1.2243 29 1 2.9284 0.8869 2.3090 30 1 3.4400 -1.0433 4.1076 31 1 2.2915 -4.4344 2.6526 32 1 3.3443 -3.7582 3.9186 33 1 1.7106 -5.6035 5.0097 34 1 -1.5278 -4.6939 4.5862 35 1 -1.0981 -6.3894 4.9159 36 1 -3.3235 -5.8357 5.8592 37 1 -2.5910 -4.5282 6.8199 38 1 -0.5301 -6.7692 8.9623 39 1 -0.9598 -5.0735 8.6321 40 1 0.5335 -6.9351 6.7278 41 1 1.2659 -5.6282 7.6890 42 1 1.2798 -2.6717 0.9665 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_14644196.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:20:30 Heat of formation + Delta-G solvation = -192.027368 kcal Electronic energy + Delta-G solvation = -28819.240401 eV Core-core repulsion = 24157.621723 eV Total energy + Delta-G solvation = -4661.618679 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.134 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -51.07925 -48.56270 -48.53696 -42.31243 -41.03825 -39.31015 -37.75826 -35.55447 -33.32810 -32.14963 -31.88043 -31.51508 -29.30033 -26.53530 -25.08708 -24.17220 -23.09644 -21.75864 -21.47941 -21.28609 -20.89705 -19.34100 -19.23078 -18.97498 -18.66715 -18.13554 -17.60372 -16.79176 -16.44795 -16.32546 -15.88181 -15.70389 -15.38272 -15.24638 -15.13565 -14.99326 -14.93100 -14.72641 -14.70598 -14.60900 -14.56705 -14.28596 -14.08343 -13.87268 -13.77784 -13.64583 -13.52779 -13.40213 -12.85066 -12.64296 -12.45698 -12.17880 -12.10719 -11.81470 -11.73398 -11.60144 -10.90063 -10.75215 -10.17215 -9.72521 -8.92042 -4.87787 1.12233 1.31181 1.58758 1.70774 1.71588 1.87712 1.99314 2.24231 2.48843 2.76257 2.88035 2.96083 3.39647 3.41206 3.51679 3.60603 3.74750 3.80623 3.84216 3.90055 3.96412 3.97862 4.04051 4.09995 4.16268 4.31819 4.40064 4.44407 4.48579 4.58928 4.71949 4.72515 4.81375 4.82182 4.86307 4.99587 5.07642 5.31346 5.34996 5.36435 6.03964 6.18823 6.36777 6.41321 6.65080 7.16912 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.055 4.055 3 Si 0.715 3.285 4 C -0.008 4.008 5 C -0.187 4.187 6 C -0.173 4.173 7 C 0.036 3.964 8 C -0.072 4.072 9 C 0.512 3.488 10 O -0.521 6.521 11 N -0.730 5.730 12 C 0.142 3.858 13 H 0.092 0.908 14 C -0.124 4.124 15 C -0.117 4.117 16 C -0.133 4.133 17 H 0.116 0.884 18 C 0.453 3.547 19 F -0.181 7.181 20 F -0.183 7.183 21 F -0.183 7.183 22 C -0.116 4.116 23 C -0.122 4.122 24 N -0.535 5.535 25 H 0.380 0.620 26 H 0.114 0.886 27 H -0.258 1.258 28 H -0.257 1.257 29 H 0.141 0.859 30 H 0.136 0.864 31 H 0.100 0.900 32 H 0.118 0.882 33 H 0.401 0.599 34 H 0.076 0.924 35 H 0.069 0.931 36 H 0.081 0.919 37 H 0.081 0.919 38 H 0.084 0.916 39 H 0.082 0.918 40 H 0.074 0.926 41 H 0.081 0.919 42 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.091 -3.960 -1.038 7.339 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.165 4.165 3 Si 0.615 3.385 4 C -0.121 4.121 5 C -0.212 4.212 6 C -0.198 4.198 7 C -0.078 4.078 8 C -0.113 4.113 9 C 0.297 3.703 10 O -0.395 6.395 11 N -0.383 5.383 12 C 0.038 3.962 13 H 0.111 0.889 14 C -0.163 4.163 15 C -0.155 4.155 16 C -0.153 4.153 17 H 0.134 0.866 18 C 0.399 3.601 19 F -0.163 7.163 20 F -0.164 7.164 21 F -0.165 7.165 22 C -0.154 4.154 23 C -0.160 4.160 24 N -0.130 5.130 25 H 0.228 0.772 26 H 0.132 0.868 27 H -0.184 1.184 28 H -0.181 1.181 29 H 0.159 0.841 30 H 0.154 0.846 31 H 0.118 0.882 32 H 0.136 0.864 33 H 0.235 0.765 34 H 0.095 0.905 35 H 0.088 0.912 36 H 0.100 0.900 37 H 0.099 0.901 38 H 0.103 0.897 39 H 0.100 0.900 40 H 0.093 0.907 41 H 0.099 0.901 42 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges 5.296 -2.834 -1.557 6.205 hybrid contribution -1.300 -1.133 0.506 1.797 sum 3.996 -3.968 -1.051 5.729 Atomic orbital electron populations 1.86566 1.17920 1.80255 1.49612 1.24773 0.83804 1.11468 0.96446 0.94408 0.91414 0.72546 0.80177 1.20779 1.06991 0.84454 0.99907 1.20675 1.05512 0.99639 0.95324 1.20589 1.06692 0.91626 1.00849 1.19476 1.03522 0.95821 0.88931 1.20141 0.99243 0.94437 0.97464 1.20632 0.86031 0.82151 0.81467 1.90776 1.45179 1.37283 1.66289 1.46050 1.32338 1.18133 1.41733 1.21029 0.85963 1.00558 0.88693 0.88948 1.21863 0.93856 1.02358 0.98219 1.21583 0.99405 0.99112 0.95428 1.22565 0.92926 1.04444 0.95339 0.86560 1.20608 0.84206 0.73619 0.81690 1.93190 1.95411 1.41654 1.86019 1.93194 1.52450 1.90114 1.80686 1.93191 1.92340 1.67190 1.63748 1.21576 0.92281 1.03496 0.98082 1.21758 0.98588 0.99640 0.95970 1.41793 1.43710 1.09278 1.18230 0.77216 0.86846 1.18354 1.18142 0.84140 0.84593 0.88222 0.86414 0.76475 0.90530 0.91223 0.90032 0.90080 0.89713 0.89980 0.90719 0.90085 0.75149 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.12 12.88 -35.23 -0.45 -1.58 16 2 C -0.06 -0.02 3.08 36.01 0.11 0.09 16 3 Si 0.72 -0.34 30.60 -169.99 -5.20 -5.55 16 4 C -0.01 -0.01 6.50 -81.79 -0.53 -0.54 16 5 C -0.19 -0.33 9.37 -39.78 -0.37 -0.71 16 6 C -0.17 -0.33 10.77 -39.78 -0.43 -0.76 16 7 C 0.04 0.03 5.66 -81.79 -0.46 -0.43 16 8 C -0.07 0.18 6.24 -29.03 -0.18 0.00 16 9 C 0.51 -0.05 7.79 -10.99 -0.09 -0.14 16 10 O -0.52 -2.47 15.70 5.56 0.09 -2.39 16 11 N -0.73 2.14 5.08 -53.81 -0.27 1.86 16 12 C 0.14 -0.31 2.45 -67.93 -0.17 -0.47 16 13 H 0.09 0.03 7.58 -51.93 -0.39 -0.37 16 14 C -0.12 0.24 5.49 -26.73 -0.15 0.09 16 15 C -0.12 0.20 4.96 -26.73 -0.13 0.07 16 16 C -0.13 0.30 2.16 -90.62 -0.20 0.10 16 17 H 0.12 -0.42 8.14 -51.93 -0.42 -0.84 16 18 C 0.45 0.17 2.69 37.16 0.10 0.27 16 19 F -0.18 -0.30 16.28 2.25 0.04 -0.27 16 20 F -0.18 -0.30 16.80 2.25 0.04 -0.27 16 21 F -0.18 -0.24 16.80 2.25 0.04 -0.20 16 22 C -0.12 0.35 4.96 -26.70 -0.13 0.21 16 23 C -0.12 0.49 5.40 -26.70 -0.14 0.35 16 24 N -0.54 -0.43 6.07 -5.44 -0.03 -0.47 16 25 H 0.38 0.02 8.70 45.56 0.40 0.42 16 26 H 0.11 -0.08 7.96 -51.93 -0.41 -0.50 16 27 H -0.26 -0.64 7.11 56.52 0.40 -0.24 16 28 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 29 H 0.14 0.04 6.24 -52.49 -0.33 -0.28 16 30 H 0.14 0.11 8.06 -52.49 -0.42 -0.31 16 31 H 0.10 -0.47 8.14 -51.93 -0.42 -0.89 16 32 H 0.12 -0.54 8.14 -51.92 -0.42 -0.97 16 33 H 0.40 -2.34 8.60 -40.82 -0.35 -2.70 16 34 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 36 H 0.08 -0.13 7.80 -51.92 -0.41 -0.53 16 37 H 0.08 -0.06 7.80 -51.93 -0.41 -0.47 16 38 H 0.08 -0.27 7.80 -51.93 -0.41 -0.68 16 39 H 0.08 -0.18 7.80 -51.93 -0.41 -0.59 16 40 H 0.07 -0.38 8.14 -51.93 -0.42 -0.81 16 41 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 42 H 0.41 -0.34 8.96 -40.82 -0.37 -0.70 16 LS Contribution 356.24 15.07 5.37 5.37 Total: 0.00 -8.88 356.24 -8.82 -17.70 By element: Atomic # 1 Polarization: -6.69 SS G_CDS: -5.66 Total: -12.34 kcal Atomic # 6 Polarization: 0.89 SS G_CDS: -2.77 Total: -1.88 kcal Atomic # 7 Polarization: 1.70 SS G_CDS: -0.31 Total: 1.40 kcal Atomic # 8 Polarization: -3.59 SS G_CDS: -0.37 Total: -3.96 kcal Atomic # 9 Polarization: -0.84 SS G_CDS: 0.11 Total: -0.73 kcal Atomic # 14 Polarization: -0.34 SS G_CDS: -5.20 Total: -5.55 kcal Total LS contribution 5.37 Total: 5.37 kcal Total: -8.88 -8.82 -17.70 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_14644196.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -174.331 kcal (2) G-P(sol) polarization free energy of solvation -8.877 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -183.209 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.819 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.696 kcal (6) G-S(sol) free energy of system = (1) + (5) -192.027 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds