Wall clock time and date at job start Tue Mar 9 2021 14:20:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86299 * 109.47042 * 2 1 4 4 C 1.50699 * 109.46740 * 239.99691 * 2 1 3 5 5 C 1.38706 * 120.03205 * 284.99824 * 4 2 1 6 6 O 1.35898 * 120.05529 * 0.02562 * 5 4 2 7 7 C 1.42905 * 117.00276 * 179.72767 * 6 5 4 8 8 C 1.50694 * 109.47179 * 179.97438 * 7 6 5 9 9 O 1.21283 * 120.00363 * 359.97438 * 8 7 6 10 10 N 1.34784 * 119.99988 * 179.97438 * 8 7 6 11 11 C 1.46493 * 119.99864 * 179.72721 * 10 8 7 12 12 H 1.09003 * 109.47333 * 324.99821 * 11 10 8 13 13 C 1.52999 * 109.47638 * 84.99998 * 11 10 8 14 14 C 1.52994 * 109.47449 * 179.97438 * 13 11 10 15 15 C 1.52996 * 109.47386 * 300.00168 * 14 13 11 16 16 H 1.09003 * 109.46833 * 300.00077 * 15 14 13 17 17 C 1.52994 * 109.47386 * 179.97438 * 15 14 13 18 18 F 1.39906 * 109.47118 * 299.99803 * 17 15 14 19 19 F 1.39899 * 109.47313 * 59.99711 * 17 15 14 20 20 F 1.39902 * 109.47558 * 179.97438 * 17 15 14 21 21 C 1.52998 * 109.47336 * 59.99530 * 15 14 13 22 22 C 1.52994 * 109.47267 * 300.00543 * 21 15 14 23 23 C 1.38749 * 119.89030 * 179.72673 * 5 4 2 24 24 C 1.38126 * 119.94656 * 0.28088 * 23 5 4 25 25 C 1.38286 * 120.05318 * 0.02562 * 24 23 5 26 26 C 1.38176 * 120.02649 * 105.32553 * 4 2 1 27 27 H 0.96702 * 113.99540 * 60.00131 * 1 2 3 28 28 H 1.08997 * 109.46821 * 120.00382 * 2 1 3 29 29 H 1.48505 * 109.99825 * 298.67890 * 3 2 1 30 30 H 1.48491 * 110.00109 * 60.00039 * 3 2 1 31 31 H 1.08998 * 109.46937 * 59.99714 * 7 6 5 32 32 H 1.09002 * 109.46814 * 299.99525 * 7 6 5 33 33 H 0.97000 * 119.99339 * 0.02562 * 10 8 7 34 34 H 1.09003 * 109.46886 * 300.00173 * 13 11 10 35 35 H 1.09003 * 109.46903 * 59.99559 * 13 11 10 36 36 H 1.09003 * 109.47176 * 179.97438 * 14 13 11 37 37 H 1.09003 * 109.47197 * 60.00021 * 14 13 11 38 38 H 1.09003 * 109.47259 * 179.97438 * 21 15 14 39 39 H 1.09003 * 109.46713 * 60.00474 * 21 15 14 40 40 H 1.09003 * 109.47197 * 299.99634 * 22 21 15 41 41 H 1.09004 * 109.47433 * 179.97438 * 22 21 15 42 42 H 1.08009 * 120.03150 * 180.29673 * 23 5 4 43 43 H 1.08002 * 119.97506 * 179.97438 * 24 23 5 44 44 H 1.08003 * 119.94618 * 179.97438 * 25 24 23 45 45 H 1.08002 * 119.97224 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.8697 -2.0941 -1.3069 6 8 1.3559 -2.8107 -0.2728 7 6 1.3183 -4.2313 -0.4233 8 6 0.7219 -4.8518 0.8137 9 8 0.3647 -4.1471 1.7338 10 7 0.5854 -6.1901 0.8975 11 6 0.0111 -6.7937 2.1025 12 1 0.3151 -6.2187 2.9772 13 6 -1.5151 -6.7920 1.9961 14 6 -2.1148 -7.4230 3.2543 15 6 -1.6148 -8.8624 3.3909 16 1 -1.9187 -9.4372 2.5160 17 6 -2.2140 -9.4932 4.6494 18 9 -1.8234 -8.7554 5.7721 19 9 -3.6097 -9.4915 4.5528 20 9 -1.7573 -10.8097 4.7741 21 6 -0.0885 -8.8643 3.4972 22 6 0.5111 -8.2333 2.2391 23 6 2.3277 -2.7448 -2.4435 24 6 2.8491 -2.0143 -3.4934 25 6 2.9153 -0.6354 -3.4122 26 6 2.4599 0.0154 -2.2807 27 1 -0.3933 0.4417 -0.7651 28 1 1.7924 -0.5139 0.8899 29 1 1.5879 2.4585 -1.2243 30 1 1.5616 2.4678 1.2084 31 1 2.3309 -4.6084 -0.5665 32 1 0.7087 -4.4888 -1.2894 33 1 0.8715 -6.7537 0.1617 34 1 -1.8713 -5.7664 1.8984 35 1 -1.8191 -7.3670 1.1214 36 1 -3.2022 -7.4213 3.1787 37 1 -1.8109 -6.8482 4.1292 38 1 0.2676 -9.8898 3.5950 39 1 0.2154 -8.2896 4.3722 40 1 0.2072 -8.8080 1.3642 41 1 1.5985 -8.2342 2.3150 42 1 2.2764 -3.8218 -2.5075 43 1 3.2061 -2.5204 -4.3782 44 1 3.3237 -0.0659 -4.2339 45 1 2.5126 1.0924 -2.2196 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_2989392.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:20:45 Heat of formation + Delta-G solvation = -235.635208 kcal Electronic energy + Delta-G solvation = -32331.318054 eV Core-core repulsion = 27286.325976 eV Total energy + Delta-G solvation = -5044.992078 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.138 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -51.06744 -48.54894 -48.52594 -41.67942 -40.97030 -39.47638 -38.38185 -37.48075 -35.61913 -32.81502 -32.15986 -32.10367 -31.14411 -29.25220 -26.63878 -26.35400 -24.18702 -23.79469 -22.87092 -22.60107 -21.66856 -21.25641 -19.53064 -19.31957 -19.21825 -18.68743 -18.39917 -17.96976 -17.51060 -17.31896 -16.94353 -16.53381 -16.17192 -15.79678 -15.72846 -15.58576 -15.46523 -15.17588 -15.10192 -15.02061 -14.92547 -14.88635 -14.71150 -14.69263 -14.56488 -14.15786 -13.91570 -13.67626 -13.62818 -13.54302 -13.42222 -13.06239 -12.67733 -12.51713 -12.45275 -12.20800 -12.17242 -11.84690 -11.82144 -11.60351 -11.57038 -10.88626 -10.41224 -10.24627 -10.03215 -9.24177 -4.90040 0.18003 0.37656 1.36849 1.38455 1.46187 1.62421 1.75191 2.03505 2.48639 2.64615 2.77563 2.88732 2.97110 3.36364 3.46374 3.51762 3.52789 3.69568 3.74153 3.75995 3.82925 3.85465 3.86938 3.93968 3.99732 4.02887 4.09294 4.16618 4.23055 4.31079 4.38003 4.48354 4.48916 4.68821 4.70967 4.71885 4.81538 4.87813 4.95529 5.00592 5.06114 5.22306 5.28300 5.29529 5.45163 5.65577 6.19110 6.34277 6.58555 7.06099 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.065 4.065 3 Si 0.689 3.311 4 C -0.145 4.145 5 C 0.152 3.848 6 O -0.278 6.278 7 C 0.039 3.961 8 C 0.516 3.484 9 O -0.505 6.505 10 N -0.726 5.726 11 C 0.144 3.856 12 H 0.095 0.905 13 C -0.126 4.126 14 C -0.117 4.117 15 C -0.134 4.134 16 H 0.117 0.883 17 C 0.453 3.547 18 F -0.181 7.181 19 F -0.183 7.183 20 F -0.184 7.184 21 C -0.116 4.116 22 C -0.122 4.122 23 C -0.212 4.212 24 C -0.072 4.072 25 C -0.151 4.151 26 C -0.083 4.083 27 H 0.370 0.630 28 H 0.118 0.882 29 H -0.260 1.260 30 H -0.257 1.257 31 H 0.094 0.906 32 H 0.093 0.907 33 H 0.402 0.598 34 H 0.079 0.921 35 H 0.070 0.930 36 H 0.082 0.918 37 H 0.081 0.919 38 H 0.085 0.915 39 H 0.082 0.918 40 H 0.075 0.925 41 H 0.081 0.919 42 H 0.129 0.871 43 H 0.128 0.872 44 H 0.129 0.871 45 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.778 -2.896 -6.518 8.585 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.325 6.325 2 C -0.175 4.175 3 Si 0.590 3.410 4 C -0.146 4.146 5 C 0.106 3.894 6 O -0.189 6.189 7 C -0.040 4.040 8 C 0.300 3.700 9 O -0.378 6.378 10 N -0.380 5.380 11 C 0.040 3.960 12 H 0.113 0.887 13 C -0.165 4.165 14 C -0.155 4.155 15 C -0.153 4.153 16 H 0.135 0.865 17 C 0.399 3.601 18 F -0.163 7.163 19 F -0.164 7.164 20 F -0.165 7.165 21 C -0.154 4.154 22 C -0.160 4.160 23 C -0.231 4.231 24 C -0.091 4.091 25 C -0.169 4.169 26 C -0.101 4.101 27 H 0.216 0.784 28 H 0.136 0.864 29 H -0.186 1.186 30 H -0.182 1.182 31 H 0.112 0.888 32 H 0.111 0.889 33 H 0.236 0.764 34 H 0.098 0.902 35 H 0.089 0.911 36 H 0.101 0.899 37 H 0.100 0.900 38 H 0.103 0.897 39 H 0.101 0.899 40 H 0.094 0.906 41 H 0.100 0.900 42 H 0.147 0.853 43 H 0.146 0.854 44 H 0.147 0.853 45 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 4.300 -1.773 -5.043 6.860 hybrid contribution -1.028 -0.966 -0.994 1.725 sum 3.272 -2.739 -6.036 7.392 Atomic orbital electron populations 1.86708 1.17566 1.79616 1.48657 1.24899 0.84012 1.10317 0.98239 0.95119 0.91440 0.74479 0.79945 1.19642 1.05542 0.90989 0.98475 1.18788 0.93102 0.90821 0.86703 1.86237 1.77440 1.16822 1.38427 1.22470 1.02506 0.81491 0.97534 1.20034 0.79090 0.82487 0.88344 1.90811 1.47270 1.60931 1.38793 1.45858 1.65195 1.06317 1.20591 1.21071 0.92875 0.93765 0.88298 0.88734 1.21882 0.94714 1.02324 0.97540 1.21583 1.01680 0.92338 0.99934 1.22567 0.98374 0.99589 0.94786 0.86524 1.20599 0.76382 0.76620 0.86504 1.93191 1.90678 1.76825 1.55557 1.93195 1.30580 1.96326 1.96328 1.93192 1.88727 1.38007 1.96567 1.21564 0.91382 1.03047 0.99436 1.21750 1.01493 0.94343 0.98368 1.21291 1.06559 1.00423 0.94817 1.21028 0.96243 0.94099 0.97685 1.21068 1.02750 0.94582 0.98518 1.21051 0.96520 0.99946 0.92571 0.78356 0.86424 1.18559 1.18189 0.88817 0.88907 0.76383 0.90236 0.91105 0.89916 0.90006 0.89663 0.89927 0.90628 0.90049 0.85293 0.85367 0.85317 0.84764 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -2.02 12.88 -35.23 -0.45 -2.48 16 2 C -0.06 -0.14 2.38 36.01 0.09 -0.05 16 3 Si 0.69 0.13 30.24 -169.99 -5.14 -5.01 16 4 C -0.15 -0.22 5.27 -104.47 -0.55 -0.77 16 5 C 0.15 0.26 6.66 -39.22 -0.26 0.00 16 6 O -0.28 -0.81 9.00 -39.33 -0.35 -1.17 16 7 C 0.04 -0.05 5.22 36.00 0.19 0.14 16 8 C 0.52 0.43 7.87 -10.98 -0.09 0.35 16 9 O -0.51 -3.05 16.16 -14.35 -0.23 -3.28 16 10 N -0.73 1.95 5.08 -53.81 -0.27 1.68 16 11 C 0.14 -0.30 2.45 -67.93 -0.17 -0.47 16 12 H 0.09 0.02 7.58 -51.93 -0.39 -0.38 16 13 C -0.13 0.22 5.49 -26.73 -0.15 0.08 16 14 C -0.12 0.20 4.96 -26.74 -0.13 0.07 16 15 C -0.13 0.31 2.17 -90.63 -0.20 0.11 16 16 H 0.12 -0.43 8.14 -51.93 -0.42 -0.85 16 17 C 0.45 0.15 2.69 37.15 0.10 0.25 16 18 F -0.18 -0.30 16.28 2.25 0.04 -0.26 16 19 F -0.18 -0.30 16.80 2.25 0.04 -0.27 16 20 F -0.18 -0.23 16.80 2.25 0.04 -0.19 16 21 C -0.12 0.36 4.96 -26.73 -0.13 0.23 16 22 C -0.12 0.51 5.39 -26.73 -0.14 0.36 16 23 C -0.21 0.10 9.04 -39.43 -0.36 -0.25 16 24 C -0.07 0.07 10.04 -39.60 -0.40 -0.32 16 25 C -0.15 0.12 10.04 -39.56 -0.40 -0.28 16 26 C -0.08 0.00 8.66 -39.60 -0.34 -0.34 16 27 H 0.37 0.16 8.70 45.56 0.40 0.56 16 28 H 0.12 0.36 7.83 -51.93 -0.41 -0.05 16 29 H -0.26 -0.32 6.69 56.52 0.38 0.06 16 30 H -0.26 -0.94 7.11 56.52 0.40 -0.53 16 31 H 0.09 -0.36 7.66 -51.93 -0.40 -0.76 16 32 H 0.09 -0.32 7.66 -51.93 -0.40 -0.72 16 33 H 0.40 -2.39 8.60 -40.82 -0.35 -2.74 16 34 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 35 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 36 H 0.08 -0.13 7.80 -51.93 -0.41 -0.53 16 37 H 0.08 -0.07 7.80 -51.93 -0.41 -0.47 16 38 H 0.08 -0.29 7.80 -51.93 -0.41 -0.69 16 39 H 0.08 -0.20 7.80 -51.93 -0.41 -0.60 16 40 H 0.08 -0.41 8.14 -51.93 -0.42 -0.83 16 41 H 0.08 -0.36 8.14 -51.93 -0.42 -0.79 16 42 H 0.13 -0.40 6.30 -52.48 -0.33 -0.73 16 43 H 0.13 -0.40 8.06 -52.49 -0.42 -0.82 16 44 H 0.13 -0.34 8.06 -52.48 -0.42 -0.76 16 45 H 0.13 -0.19 4.86 -52.49 -0.26 -0.44 16 LS Contribution 377.55 15.07 5.69 5.69 Total: 0.00 -9.75 377.55 -9.53 -19.28 By element: Atomic # 1 Polarization: -7.16 SS G_CDS: -5.94 Total: -13.10 kcal Atomic # 6 Polarization: 2.04 SS G_CDS: -2.94 Total: -0.90 kcal Atomic # 7 Polarization: 1.95 SS G_CDS: -0.27 Total: 1.68 kcal Atomic # 8 Polarization: -5.88 SS G_CDS: -1.04 Total: -6.92 kcal Atomic # 9 Polarization: -0.83 SS G_CDS: 0.11 Total: -0.71 kcal Atomic # 14 Polarization: 0.13 SS G_CDS: -5.14 Total: -5.01 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -9.75 -9.53 -19.28 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_2989392.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -216.355 kcal (2) G-P(sol) polarization free energy of solvation -9.754 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -226.109 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.526 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.280 kcal (6) G-S(sol) free energy of system = (1) + (5) -235.635 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds