Wall clock time and date at job start Tue Mar 9 2021 14:20:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86299 * 109.47042 * 2 1 4 4 C 1.50699 * 109.46740 * 239.99691 * 2 1 3 5 5 C 1.38706 * 120.03205 * 284.99824 * 4 2 1 6 6 O 1.35898 * 120.05529 * 0.02562 * 5 4 2 7 7 C 1.42905 * 117.00276 * 179.72767 * 6 5 4 8 8 C 1.50694 * 109.47179 * 179.97438 * 7 6 5 9 9 O 1.21283 * 120.00363 * 359.97438 * 8 7 6 10 10 N 1.34784 * 119.99988 * 179.97438 * 8 7 6 11 11 C 1.46493 * 119.99864 * 179.72721 * 10 8 7 12 12 H 1.09003 * 109.47333 * 324.99821 * 11 10 8 13 13 C 1.52999 * 109.47638 * 84.99998 * 11 10 8 14 14 C 1.52994 * 109.47449 * 179.97438 * 13 11 10 15 15 C 1.52996 * 109.47386 * 300.00168 * 14 13 11 16 16 H 1.09003 * 109.46833 * 300.00077 * 15 14 13 17 17 C 1.52994 * 109.47386 * 179.97438 * 15 14 13 18 18 F 1.39906 * 109.47118 * 299.99803 * 17 15 14 19 19 F 1.39899 * 109.47313 * 59.99711 * 17 15 14 20 20 F 1.39902 * 109.47558 * 179.97438 * 17 15 14 21 21 C 1.52998 * 109.47336 * 59.99530 * 15 14 13 22 22 C 1.52994 * 109.47267 * 300.00543 * 21 15 14 23 23 C 1.38749 * 119.89030 * 179.72673 * 5 4 2 24 24 C 1.38126 * 119.94656 * 0.28088 * 23 5 4 25 25 C 1.38286 * 120.05318 * 0.02562 * 24 23 5 26 26 C 1.38176 * 120.02649 * 105.32553 * 4 2 1 27 27 H 0.96702 * 113.99540 * 60.00131 * 1 2 3 28 28 H 1.08997 * 109.46821 * 120.00382 * 2 1 3 29 29 H 1.48505 * 109.99825 * 298.67890 * 3 2 1 30 30 H 1.48491 * 110.00109 * 60.00039 * 3 2 1 31 31 H 1.08998 * 109.46937 * 59.99714 * 7 6 5 32 32 H 1.09002 * 109.46814 * 299.99525 * 7 6 5 33 33 H 0.97000 * 119.99339 * 0.02562 * 10 8 7 34 34 H 1.09003 * 109.46886 * 300.00173 * 13 11 10 35 35 H 1.09003 * 109.46903 * 59.99559 * 13 11 10 36 36 H 1.09003 * 109.47176 * 179.97438 * 14 13 11 37 37 H 1.09003 * 109.47197 * 60.00021 * 14 13 11 38 38 H 1.09003 * 109.47259 * 179.97438 * 21 15 14 39 39 H 1.09003 * 109.46713 * 60.00474 * 21 15 14 40 40 H 1.09003 * 109.47197 * 299.99634 * 22 21 15 41 41 H 1.09004 * 109.47433 * 179.97438 * 22 21 15 42 42 H 1.08009 * 120.03150 * 180.29673 * 23 5 4 43 43 H 1.08002 * 119.97506 * 179.97438 * 24 23 5 44 44 H 1.08003 * 119.94618 * 179.97438 * 25 24 23 45 45 H 1.08002 * 119.97224 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 1.8697 -2.0941 -1.3069 6 8 1.3559 -2.8107 -0.2728 7 6 1.3183 -4.2313 -0.4233 8 6 0.7219 -4.8518 0.8137 9 8 0.3647 -4.1471 1.7338 10 7 0.5854 -6.1901 0.8975 11 6 0.0111 -6.7937 2.1025 12 1 0.3151 -6.2187 2.9772 13 6 -1.5151 -6.7920 1.9961 14 6 -2.1148 -7.4230 3.2543 15 6 -1.6148 -8.8624 3.3909 16 1 -1.9187 -9.4372 2.5160 17 6 -2.2140 -9.4932 4.6494 18 9 -1.8234 -8.7554 5.7721 19 9 -3.6097 -9.4915 4.5528 20 9 -1.7573 -10.8097 4.7741 21 6 -0.0885 -8.8643 3.4972 22 6 0.5111 -8.2333 2.2391 23 6 2.3277 -2.7448 -2.4435 24 6 2.8491 -2.0143 -3.4934 25 6 2.9153 -0.6354 -3.4122 26 6 2.4599 0.0154 -2.2807 27 1 -0.3933 0.4417 -0.7651 28 1 1.7924 -0.5139 0.8899 29 1 1.5879 2.4585 -1.2243 30 1 1.5616 2.4678 1.2084 31 1 2.3309 -4.6084 -0.5665 32 1 0.7087 -4.4888 -1.2894 33 1 0.8715 -6.7537 0.1617 34 1 -1.8713 -5.7664 1.8984 35 1 -1.8191 -7.3670 1.1214 36 1 -3.2022 -7.4213 3.1787 37 1 -1.8109 -6.8482 4.1292 38 1 0.2676 -9.8898 3.5950 39 1 0.2154 -8.2896 4.3722 40 1 0.2072 -8.8080 1.3642 41 1 1.5985 -8.2342 2.3150 42 1 2.2764 -3.8218 -2.5075 43 1 3.2061 -2.5204 -4.3782 44 1 3.3237 -0.0659 -4.2339 45 1 2.5126 1.0924 -2.2196 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12301704_2989392.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:20:44 Heat of formation + Delta-G solvation = -234.849236 kcal Electronic energy + Delta-G solvation = -32331.283971 eV Core-core repulsion = 27286.325976 eV Total energy + Delta-G solvation = -5044.957996 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.138 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -51.14525 -48.63528 -48.62373 -41.66175 -40.92903 -39.41968 -38.42568 -37.60517 -35.61571 -32.79448 -32.05410 -31.96805 -31.06431 -29.17699 -26.69547 -26.31758 -24.04117 -23.71863 -22.79035 -22.58259 -21.62625 -21.15095 -19.52094 -19.37133 -19.28595 -18.65265 -18.38760 -18.04526 -17.47334 -17.28372 -16.91885 -16.53558 -16.18667 -15.80949 -15.69453 -15.59628 -15.51466 -15.16507 -15.11932 -15.02562 -14.97387 -14.88207 -14.79280 -14.78704 -14.51212 -14.19182 -13.82242 -13.68203 -13.58229 -13.43813 -13.30712 -13.04649 -12.53981 -12.51832 -12.25464 -12.12082 -12.09934 -11.87106 -11.68404 -11.65708 -11.47104 -10.97534 -10.53860 -10.19633 -9.96413 -9.20346 -4.95956 0.24765 0.43406 1.28537 1.43662 1.47898 1.53740 1.76408 1.93159 2.57655 2.71301 2.80304 2.92984 3.01405 3.45142 3.50497 3.58444 3.62772 3.72702 3.87007 3.90679 3.97881 4.03308 4.06186 4.10234 4.14423 4.19951 4.24547 4.33284 4.35865 4.38454 4.54435 4.55132 4.68362 4.69132 4.84838 4.94407 4.99178 5.02064 5.03321 5.16946 5.20317 5.29741 5.38897 5.41010 5.54583 5.77472 6.29382 6.48049 6.52408 7.13704 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.082 4.082 3 Si 0.782 3.218 4 C -0.165 4.165 5 C 0.129 3.871 6 O -0.314 6.314 7 C 0.036 3.964 8 C 0.512 3.488 9 O -0.570 6.570 10 N -0.704 5.704 11 C 0.142 3.858 12 H 0.064 0.936 13 C -0.119 4.119 14 C -0.116 4.116 15 C -0.123 4.123 16 H 0.141 0.859 17 C 0.447 3.553 18 F -0.193 7.193 19 F -0.192 7.192 20 F -0.188 7.188 21 C -0.117 4.117 22 C -0.110 4.110 23 C -0.211 4.211 24 C -0.074 4.074 25 C -0.155 4.155 26 C -0.089 4.089 27 H 0.381 0.619 28 H 0.096 0.904 29 H -0.265 1.265 30 H -0.309 1.309 31 H 0.125 0.875 32 H 0.120 0.880 33 H 0.422 0.578 34 H 0.050 0.950 35 H 0.092 0.908 36 H 0.080 0.920 37 H 0.064 0.936 38 H 0.095 0.905 39 H 0.069 0.931 40 H 0.101 0.899 41 H 0.090 0.910 42 H 0.156 0.844 43 H 0.154 0.846 44 H 0.150 0.850 45 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.106 -4.412 -9.471 12.102 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.190 4.190 3 Si 0.686 3.314 4 C -0.166 4.166 5 C 0.084 3.916 6 O -0.227 6.227 7 C -0.042 4.042 8 C 0.298 3.702 9 O -0.448 6.448 10 N -0.358 5.358 11 C 0.038 3.962 12 H 0.082 0.918 13 C -0.158 4.158 14 C -0.154 4.154 15 C -0.143 4.143 16 H 0.159 0.841 17 C 0.393 3.607 18 F -0.175 7.175 19 F -0.174 7.174 20 F -0.169 7.169 21 C -0.155 4.155 22 C -0.148 4.148 23 C -0.230 4.230 24 C -0.092 4.092 25 C -0.173 4.173 26 C -0.106 4.106 27 H 0.230 0.770 28 H 0.114 0.886 29 H -0.191 1.191 30 H -0.237 1.237 31 H 0.143 0.857 32 H 0.138 0.862 33 H 0.261 0.739 34 H 0.069 0.931 35 H 0.111 0.889 36 H 0.099 0.901 37 H 0.083 0.917 38 H 0.114 0.886 39 H 0.087 0.913 40 H 0.120 0.880 41 H 0.109 0.891 42 H 0.173 0.827 43 H 0.172 0.828 44 H 0.167 0.833 45 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 5.646 -3.363 -8.053 10.394 hybrid contribution -1.482 -0.556 -0.030 1.583 sum 4.164 -3.919 -8.083 9.901 Atomic orbital electron populations 1.86653 1.19002 1.80346 1.49672 1.25201 0.83238 1.12365 0.98186 0.94054 0.89863 0.70940 0.76544 1.19703 1.06751 0.91511 0.98616 1.19063 0.94098 0.91069 0.87382 1.86191 1.78030 1.18812 1.39629 1.22720 1.04562 0.79883 0.96994 1.20562 0.78228 0.83156 0.88277 1.90787 1.50306 1.62558 1.41160 1.45693 1.63752 1.05464 1.20929 1.21043 0.92774 0.94887 0.87499 0.91799 1.21798 0.94845 1.00890 0.98237 1.21531 1.01610 0.92849 0.99393 1.22594 0.98748 0.98793 0.94125 0.84136 1.21049 0.76034 0.76467 0.87123 1.93166 1.90736 1.77088 1.56465 1.93173 1.31494 1.96358 1.96368 1.93177 1.88714 1.38412 1.96639 1.21591 0.90714 1.03519 0.99632 1.21698 1.01866 0.92466 0.98745 1.21597 1.05601 1.01865 0.93896 1.21404 0.95412 0.94159 0.98254 1.21402 1.02094 0.95163 0.98610 1.21186 0.96462 1.00477 0.92485 0.77032 0.88619 1.19081 1.23737 0.85703 0.86232 0.73944 0.93148 0.88928 0.90086 0.91705 0.88625 0.91257 0.88008 0.89137 0.82669 0.82835 0.83262 0.83727 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -5.84 12.88 -148.98 -1.92 -7.76 16 2 C -0.08 -0.55 2.38 71.24 0.17 -0.38 16 3 Si 0.78 1.21 30.24 68.60 2.07 3.28 16 4 C -0.16 -0.68 5.27 -19.77 -0.10 -0.78 16 5 C 0.13 0.52 6.66 22.50 0.15 0.67 16 6 O -0.31 -2.32 9.00 -73.37 -0.66 -2.98 16 7 C 0.04 -0.09 5.22 71.23 0.37 0.28 16 8 C 0.51 1.45 7.87 87.65 0.69 2.14 16 9 O -0.57 -8.82 16.16 16.00 0.26 -8.56 16 10 N -0.70 4.01 5.08 -442.53 -2.25 1.76 16 11 C 0.14 -0.52 2.45 44.99 0.11 -0.41 16 12 H 0.06 0.19 7.58 -2.39 -0.02 0.18 16 13 C -0.12 0.33 5.49 30.59 0.17 0.50 16 14 C -0.12 0.26 4.96 30.59 0.15 0.41 16 15 C -0.12 0.60 2.17 -10.80 -0.02 0.57 16 16 H 0.14 -1.31 8.14 -2.39 -0.02 -1.33 16 17 C 0.45 0.55 2.69 71.98 0.19 0.74 16 18 F -0.19 -0.93 16.28 44.97 0.73 -0.19 16 19 F -0.19 -0.77 16.80 44.97 0.76 -0.02 16 20 F -0.19 -0.47 16.80 44.97 0.76 0.29 16 21 C -0.12 0.78 4.96 30.59 0.15 0.93 16 22 C -0.11 1.08 5.39 30.59 0.16 1.24 16 23 C -0.21 0.52 9.04 22.37 0.20 0.72 16 24 C -0.07 0.31 10.04 22.25 0.22 0.54 16 25 C -0.15 0.49 10.04 22.28 0.22 0.71 16 26 C -0.09 0.04 8.66 22.26 0.19 0.23 16 27 H 0.38 1.20 8.70 -74.06 -0.64 0.55 16 28 H 0.10 0.95 7.83 -2.39 -0.02 0.94 16 29 H -0.26 -0.56 6.69 99.48 0.67 0.10 16 30 H -0.31 -3.07 7.11 99.48 0.71 -2.37 16 31 H 0.13 -1.17 7.66 -2.39 -0.02 -1.19 16 32 H 0.12 -1.01 7.66 -2.39 -0.02 -1.03 16 33 H 0.42 -5.92 8.60 -92.71 -0.80 -6.72 16 34 H 0.05 0.18 8.14 -2.39 -0.02 0.16 16 35 H 0.09 -0.66 8.14 -2.39 -0.02 -0.68 16 36 H 0.08 -0.15 7.80 -2.39 -0.02 -0.17 16 37 H 0.06 0.08 7.80 -2.39 -0.02 0.06 16 38 H 0.10 -0.78 7.80 -2.39 -0.02 -0.79 16 39 H 0.07 -0.26 7.80 -2.39 -0.02 -0.27 16 40 H 0.10 -1.45 8.14 -2.39 -0.02 -1.47 16 41 H 0.09 -0.97 8.14 -2.38 -0.02 -0.99 16 42 H 0.16 -1.38 6.30 -2.91 -0.02 -1.40 16 43 H 0.15 -1.47 8.06 -2.91 -0.02 -1.49 16 44 H 0.15 -1.15 8.06 -2.91 -0.02 -1.17 16 45 H 0.15 -0.50 4.86 -2.91 -0.01 -0.51 16 Total: 0.00 -28.07 377.55 2.39 -25.68 By element: Atomic # 1 Polarization: -19.21 SS G_CDS: -0.39 Total: -19.60 kcal Atomic # 6 Polarization: 5.07 SS G_CDS: 3.04 Total: 8.11 kcal Atomic # 7 Polarization: 4.01 SS G_CDS: -2.25 Total: 1.76 kcal Atomic # 8 Polarization: -16.98 SS G_CDS: -2.32 Total: -19.30 kcal Atomic # 9 Polarization: -2.17 SS G_CDS: 2.24 Total: 0.08 kcal Atomic # 14 Polarization: 1.21 SS G_CDS: 2.07 Total: 3.28 kcal Total: -28.07 2.39 -25.68 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_2989392.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -209.171 kcal (2) G-P(sol) polarization free energy of solvation -28.070 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -237.240 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.391 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.678 kcal (6) G-S(sol) free energy of system = (1) + (5) -234.849 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds