Wall clock time and date at job start Tue Mar 9 2021 14:20:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42909 * 1 3 3 Si 1.86294 * 109.47137 * 2 1 4 4 C 1.50703 * 109.47058 * 239.99732 * 2 1 3 5 5 C 1.38262 * 119.94992 * 300.00430 * 4 2 1 6 6 C 1.38137 * 120.05917 * 179.97438 * 5 4 2 7 7 C 1.38733 * 119.94429 * 359.97438 * 6 5 4 8 8 O 1.35902 * 120.05526 * 180.02562 * 7 6 5 9 9 C 1.42901 * 116.99954 * 180.02562 * 8 7 6 10 10 C 1.50696 * 109.47280 * 180.02562 * 9 8 7 11 11 O 1.21281 * 119.99909 * 359.97438 * 10 9 8 12 12 N 1.34781 * 120.00051 * 180.02562 * 10 9 8 13 13 C 1.46496 * 119.99775 * 179.97438 * 12 10 9 14 14 H 1.08996 * 109.47565 * 34.99894 * 13 12 10 15 15 C 1.52997 * 109.46953 * 154.99854 * 13 12 10 16 16 C 1.53006 * 109.47127 * 179.97438 * 15 13 12 17 17 C 1.52999 * 109.46626 * 299.99539 * 16 15 13 18 18 H 1.08993 * 109.47839 * 299.99931 * 17 16 15 19 19 C 1.53006 * 109.47000 * 180.02562 * 17 16 15 20 20 F 1.39903 * 109.47072 * 59.99875 * 19 17 16 21 21 F 1.39891 * 109.47280 * 180.02562 * 19 17 16 22 22 F 1.39902 * 109.46875 * 300.00573 * 19 17 16 23 23 C 1.52997 * 109.46991 * 60.00378 * 17 16 15 24 24 C 1.52996 * 109.47131 * 299.99311 * 23 17 16 25 25 C 1.38731 * 119.88590 * 0.27697 * 7 6 5 26 26 C 1.38144 * 119.94501 * 359.42092 * 25 7 6 27 27 H 0.96697 * 113.99467 * 59.99921 * 1 2 3 28 28 H 1.09001 * 109.46717 * 120.00207 * 2 1 3 29 29 H 1.48498 * 110.00195 * 298.68004 * 3 2 1 30 30 H 1.48500 * 110.00071 * 60.00118 * 3 2 1 31 31 H 1.08009 * 119.97054 * 359.97438 * 5 4 2 32 32 H 1.08001 * 120.02944 * 179.97438 * 6 5 4 33 33 H 1.08994 * 109.47209 * 59.99696 * 9 8 7 34 34 H 1.09005 * 109.46598 * 300.00195 * 9 8 7 35 35 H 0.97001 * 119.99650 * 359.97438 * 12 10 9 36 36 H 1.09001 * 109.47502 * 60.00124 * 15 13 12 37 37 H 1.09001 * 109.47289 * 299.99920 * 15 13 12 38 38 H 1.08993 * 109.46955 * 60.00011 * 16 15 13 39 39 H 1.09000 * 109.47050 * 179.97438 * 16 15 13 40 40 H 1.09001 * 109.47289 * 179.97438 * 23 17 16 41 41 H 1.09000 * 109.47611 * 59.99933 * 23 17 16 42 42 H 1.08996 * 109.47452 * 300.00000 * 24 23 17 43 43 H 1.09000 * 109.47054 * 180.02562 * 24 23 17 44 44 H 1.08002 * 120.02884 * 179.72361 * 25 7 6 45 45 H 1.07998 * 119.97591 * 180.32027 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2305 5 6 1.5967 -2.0342 -1.4482 6 6 2.0554 -2.6875 -2.5756 7 6 2.8523 -2.0141 -3.4900 8 8 3.3045 -2.6544 -4.6002 9 6 4.1206 -1.8991 -5.4977 10 6 4.5241 -2.7674 -6.6614 11 8 4.1500 -3.9197 -6.7165 12 7 5.3015 -2.2636 -7.6404 13 6 5.6941 -3.1079 -8.7714 14 1 4.8799 -3.7901 -9.0155 15 6 6.0014 -2.2262 -9.9834 16 6 6.4122 -3.1079 -11.1645 17 6 7.6582 -3.9131 -10.7906 18 1 8.4722 -3.2307 -10.5464 19 6 8.0694 -4.7944 -11.9718 20 9 8.3505 -3.9878 -13.0798 21 9 9.2084 -5.5311 -11.6298 22 9 7.0248 -5.6704 -12.2859 23 6 7.3509 -4.7948 -9.5785 24 6 6.9402 -3.9132 -8.3975 25 6 3.1911 -0.6874 -3.2666 26 6 2.7246 -0.0368 -2.1408 27 1 -0.3932 0.4417 -0.7650 28 1 1.7923 -0.5139 0.8900 29 1 1.5880 2.4585 -1.2242 30 1 1.5616 2.4678 1.2085 31 1 0.9759 -2.5579 -0.7362 32 1 1.7940 -3.7216 -2.7450 33 1 5.0125 -1.5542 -4.9748 34 1 3.5588 -1.0396 -5.8636 35 1 5.6010 -1.3420 -7.5960 36 1 6.8158 -1.5440 -9.7394 37 1 5.1139 -1.6521 -10.2495 38 1 5.5982 -3.7904 -11.4087 39 1 6.6306 -2.4798 -12.0281 40 1 8.2385 -5.3688 -9.3124 41 1 6.5370 -5.4775 -9.8227 42 1 7.7542 -3.2306 -8.1532 43 1 6.7217 -4.5413 -7.5339 44 1 3.8150 -0.1623 -3.9748 45 1 2.9838 0.9975 -1.9691 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12301704_2989410.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:20:47 Heat of formation + Delta-G solvation = -237.446241 kcal Electronic energy + Delta-G solvation = -31549.355654 eV Core-core repulsion = 26504.285044 eV Total energy + Delta-G solvation = -5045.070610 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.138 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -51.12788 -48.61966 -48.60620 -41.60887 -40.88272 -39.51285 -38.81400 -37.23276 -35.59141 -32.53299 -31.94043 -31.90133 -31.62100 -29.33070 -26.50260 -26.02733 -24.09693 -23.94436 -22.97542 -22.28863 -21.61881 -21.14521 -19.50253 -19.35070 -19.26876 -18.64432 -18.49368 -18.12906 -17.41438 -17.28202 -16.87240 -16.39494 -16.14718 -15.93280 -15.66880 -15.56452 -15.53513 -15.18729 -15.11056 -14.95909 -14.91600 -14.77606 -14.76944 -14.61374 -14.48949 -14.36605 -13.80538 -13.69130 -13.57005 -13.49151 -13.39507 -13.27597 -12.50270 -12.29092 -12.22360 -12.14197 -12.08006 -12.03587 -11.63548 -11.61979 -11.43980 -10.95856 -10.58518 -10.16801 -10.02985 -9.22538 -4.89930 0.28102 0.31757 1.34795 1.46024 1.48242 1.62413 1.78381 1.99866 2.58102 2.65828 2.82297 2.95282 3.03384 3.44563 3.52385 3.60604 3.65302 3.74818 3.83504 3.89695 3.95762 4.04647 4.06998 4.09472 4.13989 4.22841 4.27294 4.31954 4.39025 4.43509 4.56385 4.58012 4.70460 4.71897 4.87627 4.97426 4.98141 5.05246 5.06216 5.16718 5.19823 5.23085 5.26327 5.43672 5.50273 5.70668 6.27967 6.49719 6.51270 7.15940 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.083 4.083 3 Si 0.773 3.227 4 C -0.159 4.159 5 C -0.061 4.061 6 C -0.168 4.168 7 C 0.121 3.879 8 O -0.321 6.321 9 C 0.035 3.965 10 C 0.512 3.488 11 O -0.573 6.573 12 N -0.704 5.704 13 C 0.142 3.858 14 H 0.064 0.936 15 C -0.111 4.111 16 C -0.117 4.117 17 C -0.123 4.123 18 H 0.141 0.859 19 C 0.446 3.554 20 F -0.189 7.189 21 F -0.192 7.192 22 F -0.193 7.193 23 C -0.116 4.116 24 C -0.119 4.119 25 C -0.199 4.199 26 C -0.075 4.075 27 H 0.385 0.615 28 H 0.121 0.879 29 H -0.278 1.278 30 H -0.308 1.308 31 H 0.132 0.868 32 H 0.125 0.875 33 H 0.129 0.871 34 H 0.126 0.874 35 H 0.423 0.577 36 H 0.102 0.898 37 H 0.089 0.911 38 H 0.068 0.932 39 H 0.094 0.906 40 H 0.081 0.919 41 H 0.064 0.936 42 H 0.093 0.907 43 H 0.053 0.947 44 H 0.167 0.833 45 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.112 8.935 -0.448 10.304 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.192 4.192 3 Si 0.678 3.322 4 C -0.159 4.159 5 C -0.079 4.079 6 C -0.186 4.186 7 C 0.076 3.924 8 O -0.234 6.234 9 C -0.042 4.042 10 C 0.298 3.702 11 O -0.451 6.451 12 N -0.358 5.358 13 C 0.037 3.963 14 H 0.082 0.918 15 C -0.148 4.148 16 C -0.155 4.155 17 C -0.142 4.142 18 H 0.158 0.842 19 C 0.393 3.607 20 F -0.170 7.170 21 F -0.174 7.174 22 F -0.175 7.175 23 C -0.154 4.154 24 C -0.157 4.157 25 C -0.217 4.217 26 C -0.093 4.093 27 H 0.235 0.765 28 H 0.138 0.862 29 H -0.204 1.204 30 H -0.237 1.237 31 H 0.150 0.850 32 H 0.143 0.857 33 H 0.147 0.853 34 H 0.143 0.857 35 H 0.262 0.738 36 H 0.120 0.880 37 H 0.107 0.893 38 H 0.087 0.913 39 H 0.112 0.888 40 H 0.100 0.900 41 H 0.083 0.917 42 H 0.112 0.888 43 H 0.072 0.928 44 H 0.184 0.816 45 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 4.701 8.405 -0.049 9.631 hybrid contribution -1.093 -0.574 -0.758 1.448 sum 3.608 7.832 -0.807 8.661 Atomic orbital electron populations 1.86571 1.18865 1.80407 1.50173 1.25261 0.83230 1.12111 0.98560 0.94144 0.90105 0.71556 0.76364 1.20291 1.02118 0.95137 0.98397 1.20897 0.97163 0.94091 0.95758 1.20616 1.01647 1.01254 0.95127 1.19208 0.94608 0.92032 0.86524 1.86132 1.65198 1.40407 1.31684 1.22777 0.97796 0.94225 0.89425 1.20570 0.78088 0.87547 0.83958 1.90776 1.55778 1.20319 1.78241 1.45693 1.51351 1.16822 1.21907 1.21041 0.96573 0.92840 0.85799 0.91775 1.21696 1.04021 0.97417 0.91684 1.21590 0.95265 0.98936 0.99715 1.22597 1.03281 0.97426 0.90938 0.84152 1.21077 0.74318 0.79917 0.85427 1.93177 1.93740 1.72998 1.57109 1.93171 1.52855 1.79233 1.92118 1.93164 1.58448 1.71803 1.94075 1.21537 1.02792 0.97728 0.93354 1.21801 0.98173 0.98776 0.96988 1.21506 1.05747 0.93187 1.01293 1.21075 0.95312 1.00185 0.92683 0.76536 0.86155 1.20394 1.23717 0.85011 0.85729 0.85318 0.85683 0.73850 0.87979 0.89267 0.91304 0.88780 0.90036 0.91702 0.88830 0.92815 0.81594 0.82878 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.36 12.77 -148.98 -1.90 -3.27 16 2 C -0.08 0.11 2.82 71.24 0.20 0.31 16 3 Si 0.77 -2.96 29.78 68.60 2.04 -0.92 16 4 C -0.16 0.11 5.39 -19.85 -0.11 0.00 16 5 C -0.06 -0.14 9.60 22.25 0.21 0.08 16 6 C -0.17 -0.70 9.99 22.36 0.22 -0.48 16 7 C 0.12 0.26 6.69 22.51 0.15 0.41 16 8 O -0.32 -1.42 9.67 -73.41 -0.71 -2.13 16 9 C 0.04 -0.20 5.22 71.23 0.37 0.17 16 10 C 0.51 0.04 7.87 87.66 0.69 0.73 16 11 O -0.57 -7.15 16.16 16.01 0.26 -6.89 16 12 N -0.70 5.59 5.08 -442.54 -2.25 3.35 16 13 C 0.14 -0.79 2.45 44.99 0.11 -0.68 16 14 H 0.06 0.08 7.58 -2.39 -0.02 0.06 16 15 C -0.11 1.22 5.39 30.60 0.16 1.39 16 16 C -0.12 0.90 4.96 30.60 0.15 1.05 16 17 C -0.12 0.74 2.16 -10.79 -0.02 0.72 16 18 H 0.14 -1.47 8.14 -2.39 -0.02 -1.49 16 19 C 0.45 0.14 2.69 71.98 0.19 0.33 16 20 F -0.19 -0.34 16.80 44.97 0.76 0.42 16 21 F -0.19 -0.59 16.80 44.97 0.76 0.17 16 22 F -0.19 -0.76 16.28 44.97 0.73 -0.02 16 23 C -0.12 0.45 4.96 30.59 0.15 0.60 16 24 C -0.12 0.59 5.49 30.59 0.17 0.75 16 25 C -0.20 0.82 9.04 22.37 0.20 1.02 16 26 C -0.08 0.30 8.66 22.25 0.19 0.50 16 27 H 0.39 -1.23 8.70 -74.06 -0.64 -1.88 16 28 H 0.12 -0.27 7.96 -2.39 -0.02 -0.29 16 29 H -0.28 0.28 7.11 99.48 0.71 0.99 16 30 H -0.31 -1.48 7.11 99.48 0.71 -0.77 16 31 H 0.13 0.21 8.06 -2.91 -0.02 0.19 16 32 H 0.12 0.62 8.06 -2.91 -0.02 0.60 16 33 H 0.13 -1.61 7.65 -2.39 -0.02 -1.62 16 34 H 0.13 -1.50 7.67 -2.38 -0.02 -1.52 16 35 H 0.42 -6.88 8.60 -92.71 -0.80 -7.67 16 36 H 0.10 -1.59 8.14 -2.39 -0.02 -1.61 16 37 H 0.09 -1.05 8.14 -2.39 -0.02 -1.07 16 38 H 0.07 -0.32 7.80 -2.39 -0.02 -0.34 16 39 H 0.09 -0.83 7.80 -2.39 -0.02 -0.85 16 40 H 0.08 -0.29 7.80 -2.39 -0.02 -0.31 16 41 H 0.06 -0.03 7.80 -2.39 -0.02 -0.05 16 42 H 0.09 -0.86 8.14 -2.39 -0.02 -0.88 16 43 H 0.05 0.05 8.14 -2.39 -0.02 0.03 16 44 H 0.17 -1.97 6.30 -2.91 -0.02 -1.99 16 45 H 0.15 -1.41 4.87 -2.91 -0.01 -1.42 16 Total: 0.00 -26.69 378.31 2.39 -24.31 By element: Atomic # 1 Polarization: -21.55 SS G_CDS: -0.35 Total: -21.90 kcal Atomic # 6 Polarization: 3.85 SS G_CDS: 3.06 Total: 6.91 kcal Atomic # 7 Polarization: 5.59 SS G_CDS: -2.25 Total: 3.35 kcal Atomic # 8 Polarization: -9.94 SS G_CDS: -2.35 Total: -12.29 kcal Atomic # 9 Polarization: -1.69 SS G_CDS: 2.24 Total: 0.56 kcal Atomic # 14 Polarization: -2.96 SS G_CDS: 2.04 Total: -0.92 kcal Total: -26.69 2.39 -24.31 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_2989410.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -213.141 kcal (2) G-P(sol) polarization free energy of solvation -26.694 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -239.835 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.389 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.305 kcal (6) G-S(sol) free energy of system = (1) + (5) -237.446 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds