Wall clock time and date at job start Tue Mar 9 2021 14:20:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86302 * 109.47205 * 2 1 4 4 C 1.50703 * 109.47392 * 119.99848 * 2 1 3 5 5 C 1.38269 * 119.94423 * 64.99557 * 4 2 1 6 6 C 1.38142 * 120.05583 * 180.02562 * 5 4 2 7 7 C 1.38732 * 119.94248 * 0.02562 * 6 5 4 8 8 O 1.35905 * 120.04909 * 179.97438 * 7 6 5 9 9 C 1.42898 * 116.99440 * 180.02562 * 8 7 6 10 10 C 1.52999 * 109.47046 * 180.02562 * 9 8 7 11 11 C 1.50701 * 109.47346 * 180.02562 * 10 9 8 12 12 O 1.21284 * 119.99770 * 359.97438 * 11 10 9 13 13 N 1.34780 * 120.00162 * 179.97438 * 11 10 9 14 14 C 1.46492 * 119.99930 * 179.97438 * 13 11 10 15 15 H 1.09002 * 109.47696 * 34.99761 * 14 13 11 16 16 C 1.53002 * 109.47204 * 155.00105 * 14 13 11 17 17 C 1.53000 * 109.47233 * 180.02562 * 16 14 13 18 18 C 1.52997 * 109.47060 * 299.99657 * 17 16 14 19 19 H 1.09002 * 109.47153 * 300.00319 * 18 17 16 20 20 C 1.52992 * 109.47482 * 180.02562 * 18 17 16 21 21 F 1.39900 * 109.47126 * 59.99914 * 20 18 17 22 22 F 1.39906 * 109.47544 * 179.97438 * 20 18 17 23 23 F 1.39905 * 109.47115 * 300.00260 * 20 18 17 24 24 C 1.52999 * 109.47317 * 59.99960 * 18 17 16 25 25 C 1.52997 * 109.47244 * 274.99857 * 14 13 11 26 26 C 1.38724 * 119.88835 * 0.27519 * 7 6 5 27 27 C 1.38143 * 119.94750 * 359.46734 * 26 7 6 28 28 H 0.96703 * 114.00333 * 300.00338 * 1 2 3 29 29 H 1.08997 * 109.47407 * 240.00179 * 2 1 3 30 30 H 1.48500 * 110.00145 * 178.68324 * 3 2 1 31 31 H 1.48507 * 109.99769 * 299.99951 * 3 2 1 32 32 H 1.08007 * 119.96947 * 359.97438 * 5 4 2 33 33 H 1.08003 * 120.02397 * 180.02562 * 6 5 4 34 34 H 1.09004 * 109.47536 * 60.00416 * 9 8 7 35 35 H 1.09000 * 109.47490 * 300.00355 * 9 8 7 36 36 H 1.09002 * 109.47533 * 60.00128 * 10 9 8 37 37 H 1.09000 * 109.46920 * 300.00281 * 10 9 8 38 38 H 0.96998 * 119.99716 * 359.97438 * 13 11 10 39 39 H 1.08992 * 109.47063 * 59.99836 * 16 14 13 40 40 H 1.09004 * 109.46733 * 299.99549 * 16 14 13 41 41 H 1.09002 * 109.47398 * 59.99826 * 17 16 14 42 42 H 1.09001 * 109.47194 * 180.02562 * 17 16 14 43 43 H 1.09000 * 109.47486 * 180.02562 * 24 18 17 44 44 H 1.09002 * 109.46716 * 60.00091 * 24 18 17 45 45 H 1.09002 * 109.47153 * 300.00242 * 25 14 13 46 46 H 1.09001 * 109.47289 * 60.00326 * 25 14 13 47 47 H 1.08002 * 120.02493 * 179.71938 * 26 7 6 48 48 H 1.08000 * 119.97508 * 180.22601 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6840 -2.0605 1.3973 6 6 2.1430 -2.7138 2.5246 7 6 2.8523 -2.0140 3.4900 8 8 3.3044 -2.6545 4.6001 9 6 4.0266 -1.8710 5.5521 10 6 4.4521 -2.7573 6.7244 11 6 5.2133 -1.9309 7.7287 12 8 5.3977 -0.7493 7.5265 13 7 5.6891 -2.5047 8.8516 14 6 6.4295 -1.7015 9.8276 15 1 6.0117 -0.6953 9.8619 16 6 6.3174 -2.3476 11.2099 17 6 7.0901 -1.5083 12.2294 18 6 8.5621 -1.4349 11.8186 19 1 8.9804 -2.4409 11.7845 20 6 9.3350 -0.5962 12.8383 21 9 9.2325 -1.1875 14.1021 22 9 10.6812 -0.5296 12.4630 23 9 8.7984 0.6951 12.8827 24 6 8.6743 -0.7889 10.4363 25 6 7.9014 -1.6287 9.4166 26 6 3.0937 -0.6582 3.3232 27 6 2.6372 -0.0105 2.1916 28 1 -0.3934 0.4417 0.7650 29 1 1.7923 -0.5138 -0.8900 30 1 3.5346 1.7703 0.0321 31 1 1.5614 2.4679 -1.2086 32 1 1.1307 -2.6045 0.6460 33 1 1.9499 -3.7685 2.6542 34 1 3.3898 -1.0654 5.9178 35 1 4.9117 -1.4473 5.0774 36 1 5.0892 -3.5626 6.3586 37 1 3.5673 -3.1813 7.1992 38 1 5.5412 -3.4496 9.0134 39 1 6.7352 -3.3537 11.1757 40 1 5.2687 -2.3994 11.5028 41 1 6.6719 -0.5023 12.2636 42 1 7.0107 -1.9688 13.2141 43 1 9.7230 -0.7370 10.1434 44 1 8.2561 0.2171 10.4705 45 1 8.3193 -2.6348 9.3823 46 1 7.9813 -1.1683 8.4318 47 1 3.6417 -0.1103 4.0755 48 1 2.8281 1.0442 2.0596 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12301704_4549602.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:20:50 Heat of formation + Delta-G solvation = -246.507723 kcal Electronic energy + Delta-G solvation = -33263.129244 eV Core-core repulsion = 28062.128079 eV Total energy + Delta-G solvation = -5201.001164 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.154 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -51.13112 -48.62275 -48.60939 -41.44921 -41.02456 -39.46838 -39.01771 -37.17147 -35.54709 -33.46892 -32.13288 -31.93676 -31.66655 -31.01314 -27.00573 -26.27222 -25.32235 -23.98620 -23.60038 -22.71696 -22.15928 -21.50642 -21.02196 -19.54801 -19.30699 -19.25997 -18.61237 -18.32186 -17.69707 -17.50713 -17.44311 -16.91993 -16.44956 -16.15050 -15.93868 -15.76166 -15.65448 -15.57202 -15.21415 -15.13839 -14.98418 -14.80460 -14.77930 -14.76922 -14.69659 -14.49356 -14.44217 -14.28435 -14.08740 -13.63550 -13.57204 -13.51388 -13.28913 -12.87099 -12.79731 -12.48631 -12.22766 -12.21486 -12.08298 -12.04178 -11.77419 -11.71518 -11.62411 -11.43458 -10.98521 -10.41784 -10.10956 -10.04821 -9.22046 -5.01746 0.27815 0.30005 1.31674 1.55276 1.61824 1.68624 1.79636 1.94519 2.48059 2.65455 2.81780 2.94876 3.02964 3.54715 3.56913 3.60366 3.65149 3.72635 3.83377 3.88575 3.90249 3.92435 4.00274 4.10768 4.11127 4.22933 4.26092 4.27791 4.34598 4.38822 4.44819 4.49926 4.59177 4.66772 4.70685 4.71580 4.79402 4.88462 4.97101 4.97183 5.04991 5.06016 5.17511 5.19765 5.25421 5.28400 5.48502 5.49166 5.71576 6.32210 6.50141 6.78148 7.19824 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.065 4.065 3 Si 0.768 3.232 4 C -0.163 4.163 5 C -0.060 4.060 6 C -0.159 4.159 7 C 0.123 3.877 8 O -0.321 6.321 9 C 0.072 3.928 10 C -0.133 4.133 11 C 0.520 3.480 12 O -0.582 6.582 13 N -0.711 5.711 14 C 0.141 3.859 15 H 0.068 0.932 16 C -0.112 4.112 17 C -0.116 4.116 18 C -0.124 4.124 19 H 0.137 0.863 20 C 0.447 3.553 21 F -0.189 7.189 22 F -0.192 7.192 23 F -0.192 7.192 24 C -0.115 4.115 25 C -0.119 4.119 26 C -0.209 4.209 27 C -0.078 4.078 28 H 0.395 0.605 29 H 0.107 0.893 30 H -0.290 1.290 31 H -0.298 1.298 32 H 0.139 0.861 33 H 0.142 0.858 34 H 0.067 0.933 35 H 0.063 0.937 36 H 0.126 0.874 37 H 0.127 0.873 38 H 0.420 0.580 39 H 0.096 0.904 40 H 0.088 0.912 41 H 0.071 0.929 42 H 0.092 0.908 43 H 0.080 0.920 44 H 0.067 0.933 45 H 0.088 0.912 46 H 0.056 0.944 47 H 0.141 0.859 48 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.536 -4.964 3.618 6.331 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.176 4.176 3 Si 0.674 3.326 4 C -0.163 4.163 5 C -0.078 4.078 6 C -0.177 4.177 7 C 0.078 3.922 8 O -0.235 6.235 9 C -0.004 4.004 10 C -0.172 4.172 11 C 0.307 3.693 12 O -0.462 6.462 13 N -0.363 5.363 14 C 0.036 3.964 15 H 0.087 0.913 16 C -0.150 4.150 17 C -0.154 4.154 18 C -0.143 4.143 19 H 0.155 0.845 20 C 0.393 3.607 21 F -0.171 7.171 22 F -0.174 7.174 23 F -0.174 7.174 24 C -0.153 4.153 25 C -0.157 4.157 26 C -0.228 4.228 27 C -0.096 4.096 28 H 0.245 0.755 29 H 0.124 0.876 30 H -0.217 1.217 31 H -0.226 1.226 32 H 0.157 0.843 33 H 0.160 0.840 34 H 0.085 0.915 35 H 0.082 0.918 36 H 0.144 0.856 37 H 0.145 0.855 38 H 0.257 0.743 39 H 0.115 0.885 40 H 0.106 0.894 41 H 0.089 0.911 42 H 0.110 0.890 43 H 0.099 0.901 44 H 0.086 0.914 45 H 0.106 0.894 46 H 0.075 0.925 47 H 0.158 0.842 48 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -0.845 -4.039 2.621 4.889 hybrid contribution 0.554 -0.297 0.067 0.632 sum -0.292 -4.337 2.688 5.110 Atomic orbital electron populations 1.86460 1.17287 1.82150 1.50490 1.25034 0.85194 1.10298 0.97053 0.93821 0.77845 0.75966 0.84931 1.20326 1.02751 0.95292 0.97964 1.20983 0.96665 0.93754 0.96439 1.20668 1.01819 1.01365 0.93871 1.19177 0.94547 0.91349 0.87130 1.85960 1.69319 1.38852 1.29362 1.22470 0.95777 0.93734 0.88379 1.21442 1.03110 0.99121 0.93570 1.20626 0.78492 0.87508 0.82669 1.90748 1.59947 1.18083 1.77420 1.45882 1.55843 1.14333 1.20214 1.21023 0.91274 0.95742 0.88338 0.91349 1.21694 1.02030 1.00055 0.91203 1.21584 0.90987 1.02315 1.00535 1.22595 0.97786 1.00977 0.92978 0.84475 1.21061 0.78135 0.79295 0.82200 1.93176 1.95934 1.83672 1.44294 1.93174 1.36550 1.96473 1.91199 1.93165 1.85910 1.41648 1.96643 1.21547 1.02122 0.99673 0.91995 1.21808 0.94518 1.01311 0.98078 1.21423 1.06444 0.93910 1.01021 1.20988 0.96024 0.99867 0.92694 0.75540 0.87586 1.21670 1.22626 0.84334 0.84032 0.91451 0.91831 0.85611 0.85457 0.74252 0.88507 0.89373 0.91054 0.88975 0.90134 0.91406 0.89379 0.92503 0.84154 0.83739 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.57 12.83 -148.98 -1.91 -2.48 16 2 C -0.07 -0.04 2.80 71.24 0.20 0.16 16 3 Si 0.77 -0.57 29.80 68.60 2.04 1.48 16 4 C -0.16 -0.24 5.35 -19.85 -0.11 -0.34 16 5 C -0.06 -0.12 9.68 22.25 0.22 0.09 16 6 C -0.16 -0.41 9.99 22.37 0.22 -0.18 16 7 C 0.12 0.43 6.69 22.50 0.15 0.58 16 8 O -0.32 -0.70 10.14 -92.48 -0.94 -1.64 16 9 C 0.07 -0.05 4.03 71.98 0.29 0.24 16 10 C -0.13 0.86 6.07 29.85 0.18 1.04 16 11 C 0.52 -1.09 7.79 87.66 0.68 -0.41 16 12 O -0.58 -4.20 15.64 -3.04 -0.05 -4.25 16 13 N -0.71 5.53 5.08 -442.54 -2.25 3.28 16 14 C 0.14 -0.83 2.45 44.99 0.11 -0.72 16 15 H 0.07 -0.01 7.58 -2.39 -0.02 -0.03 16 16 C -0.11 1.18 5.39 30.60 0.16 1.34 16 17 C -0.12 0.88 4.96 30.59 0.15 1.03 16 18 C -0.12 0.73 2.16 -10.80 -0.02 0.71 16 19 H 0.14 -1.34 8.14 -2.39 -0.02 -1.36 16 20 C 0.45 0.10 2.69 71.98 0.19 0.29 16 21 F -0.19 -0.36 16.80 44.97 0.76 0.39 16 22 F -0.19 -0.58 16.80 44.97 0.76 0.17 16 23 F -0.19 -0.66 16.28 44.97 0.73 0.07 16 24 C -0.12 0.49 4.96 30.61 0.15 0.64 16 25 C -0.12 0.62 5.50 30.61 0.17 0.79 16 26 C -0.21 -0.45 9.04 22.36 0.20 -0.25 16 27 C -0.08 -0.05 8.66 22.25 0.19 0.14 16 28 H 0.39 -2.70 8.70 -74.06 -0.64 -3.35 16 29 H 0.11 0.16 7.96 -2.39 -0.02 0.14 16 30 H -0.29 -1.30 7.11 99.48 0.71 -0.59 16 31 H -0.30 -1.95 7.11 99.48 0.71 -1.25 16 32 H 0.14 0.03 8.06 -2.91 -0.02 0.01 16 33 H 0.14 0.00 8.06 -2.91 -0.02 -0.02 16 34 H 0.07 0.02 7.61 -2.38 -0.02 0.01 16 35 H 0.06 0.06 7.63 -2.39 -0.02 0.04 16 36 H 0.13 -1.25 8.14 -2.39 -0.02 -1.27 16 37 H 0.13 -1.29 8.14 -2.39 -0.02 -1.31 16 38 H 0.42 -6.01 8.60 -92.71 -0.80 -6.80 16 39 H 0.10 -1.37 8.14 -2.39 -0.02 -1.39 16 40 H 0.09 -0.98 8.14 -2.39 -0.02 -1.00 16 41 H 0.07 -0.36 7.80 -2.39 -0.02 -0.38 16 42 H 0.09 -0.78 7.80 -2.39 -0.02 -0.80 16 43 H 0.08 -0.31 7.80 -2.39 -0.02 -0.33 16 44 H 0.07 -0.10 7.80 -2.39 -0.02 -0.12 16 45 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 46 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 47 H 0.14 0.04 6.30 -2.91 -0.02 0.02 16 48 H 0.15 -0.51 4.90 -2.91 -0.01 -0.52 16 Total: 0.00 -20.83 399.40 1.90 -18.93 By element: Atomic # 1 Polarization: -20.71 SS G_CDS: -0.39 Total: -21.11 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: 3.15 Total: 5.15 kcal Atomic # 7 Polarization: 5.53 SS G_CDS: -2.25 Total: 3.28 kcal Atomic # 8 Polarization: -5.47 SS G_CDS: -2.90 Total: -8.37 kcal Atomic # 9 Polarization: -1.60 SS G_CDS: 2.24 Total: 0.64 kcal Atomic # 14 Polarization: -0.57 SS G_CDS: 2.04 Total: 1.48 kcal Total: -20.83 1.90 -18.93 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_4549602.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -227.577 kcal (2) G-P(sol) polarization free energy of solvation -20.832 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -248.409 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.901 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.931 kcal (6) G-S(sol) free energy of system = (1) + (5) -246.508 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds