Wall clock time and date at job start Tue Mar 9 2021 14:20:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47342 * 2 1 4 4 C 1.50706 * 109.46772 * 120.00089 * 2 1 3 5 5 C 1.38246 * 119.96602 * 244.99732 * 4 2 1 6 6 C 1.38291 * 120.10740 * 179.97438 * 5 4 2 7 7 C 1.38127 * 120.05716 * 0.02562 * 6 5 4 8 8 C 1.38757 * 119.94141 * 359.96932 * 7 6 5 9 9 O 1.35902 * 120.05136 * 180.02562 * 8 7 6 10 10 C 1.42898 * 117.00292 * 0.02562 * 9 8 7 11 11 C 1.52997 * 109.47341 * 179.97438 * 10 9 8 12 12 C 1.50694 * 109.47487 * 179.97438 * 11 10 9 13 13 O 1.21287 * 119.99733 * 0.02562 * 12 11 10 14 14 N 1.34772 * 120.00565 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00618 * 179.97438 * 14 12 11 16 16 H 1.09004 * 109.46884 * 325.00770 * 15 14 12 17 17 C 1.53003 * 109.46589 * 85.00029 * 15 14 12 18 18 C 1.53006 * 109.46720 * 180.02562 * 17 15 14 19 19 C 1.52996 * 109.46954 * 300.00061 * 18 17 15 20 20 H 1.09004 * 109.47615 * 300.00152 * 19 18 17 21 21 C 1.53006 * 109.47291 * 180.02562 * 19 18 17 22 22 F 1.39904 * 109.46716 * 300.00250 * 21 19 18 23 23 F 1.39906 * 109.46879 * 59.99820 * 21 19 18 24 24 F 1.39897 * 109.47480 * 179.97438 * 21 19 18 25 25 C 1.52993 * 109.47419 * 60.00259 * 19 18 17 26 26 C 1.52996 * 109.47285 * 205.00212 * 15 14 12 27 27 C 1.38163 * 119.97459 * 64.72458 * 4 2 1 28 28 H 0.96706 * 113.99851 * 60.00423 * 1 2 3 29 29 H 1.09003 * 109.47547 * 239.99589 * 2 1 3 30 30 H 1.48497 * 110.00004 * 59.99818 * 3 2 1 31 31 H 1.48500 * 110.00023 * 181.31462 * 3 2 1 32 32 H 1.07998 * 119.94647 * 359.97438 * 5 4 2 33 33 H 1.08005 * 119.97267 * 179.97438 * 6 5 4 34 34 H 1.07998 * 120.02924 * 179.97438 * 7 6 5 35 35 H 1.09007 * 109.46836 * 299.99520 * 10 9 8 36 36 H 1.09001 * 109.47471 * 59.99283 * 10 9 8 37 37 H 1.08999 * 109.47100 * 299.99953 * 11 10 9 38 38 H 1.09001 * 109.47244 * 59.99364 * 11 10 9 39 39 H 0.97008 * 119.99416 * 0.02562 * 14 12 11 40 40 H 1.08999 * 109.47267 * 299.99924 * 17 15 14 41 41 H 1.08996 * 109.47098 * 60.00481 * 17 15 14 42 42 H 1.08997 * 109.46798 * 180.02562 * 18 17 15 43 43 H 1.08996 * 109.47208 * 60.00223 * 18 17 15 44 44 H 1.09003 * 109.47677 * 179.97438 * 25 19 18 45 45 H 1.09001 * 109.47433 * 59.99816 * 25 19 18 46 46 H 1.09001 * 109.46968 * 299.99748 * 26 15 14 47 47 H 1.08997 * 109.47201 * 60.00409 * 26 15 14 48 48 H 1.08004 * 120.02595 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7105 1.2305 5 6 2.6386 -0.0117 2.1910 6 6 3.1004 -0.6606 3.3215 7 6 2.8562 -2.0092 3.4934 8 6 2.1464 -2.7127 2.5309 9 8 1.9044 -4.0395 2.6980 10 6 2.4098 -4.6462 3.8891 11 6 2.0414 -6.1311 3.9009 12 6 2.5748 -6.7710 5.1566 13 8 3.1889 -6.1048 5.9630 14 7 2.3688 -8.0833 5.3842 15 6 2.8879 -8.7056 6.6046 16 1 3.8408 -8.2471 6.8692 17 6 1.8893 -8.5010 7.7457 18 6 2.4318 -9.1504 9.0205 19 6 2.6352 -10.6481 8.7832 20 1 1.6825 -11.1069 8.5188 21 6 3.1770 -11.2976 10.0581 22 9 4.3998 -10.7089 10.3980 23 9 2.2635 -11.1106 11.1012 24 9 3.3625 -12.6672 9.8413 25 6 3.6337 -10.8526 7.6422 26 6 3.0910 -10.2033 6.3669 27 6 1.6795 -2.0583 1.4005 28 1 -0.3933 0.4417 -0.7651 29 1 1.7924 -0.5139 -0.8899 30 1 1.5615 2.4679 1.2084 31 1 3.5346 1.7702 -0.0320 32 1 2.8309 1.0427 2.0582 33 1 3.6532 -0.1126 4.0703 34 1 3.2175 -2.5156 4.3763 35 1 3.4943 -4.5403 3.9187 36 1 1.9730 -4.1568 4.7596 37 1 0.9569 -6.2366 3.8714 38 1 2.4778 -6.6207 3.0303 39 1 1.8774 -8.6160 4.7394 40 1 1.7447 -7.4340 7.9151 41 1 0.9365 -8.9594 7.4812 42 1 1.7202 -9.0051 9.8333 43 1 3.3845 -8.6917 9.2849 44 1 3.7791 -11.9196 7.4733 45 1 4.5865 -10.3939 7.9065 46 1 2.1380 -10.6616 6.1024 47 1 3.8024 -10.3490 5.5540 48 1 1.1234 -2.6028 0.6517 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:20:54 Heat of formation + Delta-G solvation = -246.609370 kcal Electronic energy + Delta-G solvation = -33280.106009 eV Core-core repulsion = 28079.100436 eV Total energy + Delta-G solvation = -5201.005572 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.154 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -51.08837 -48.56886 -48.54893 -41.48703 -41.06751 -39.55583 -38.93877 -37.29999 -35.66323 -33.51715 -32.56604 -32.17170 -31.65408 -30.66589 -27.15944 -26.62288 -25.12984 -24.19285 -23.66050 -22.97128 -21.89370 -21.63008 -21.16180 -19.37205 -19.24413 -19.08769 -18.67519 -18.41407 -17.94063 -17.68053 -17.50064 -17.28561 -16.90079 -16.24452 -15.87227 -15.74064 -15.69640 -15.36935 -15.29686 -15.20657 -14.95851 -14.88326 -14.73385 -14.71548 -14.59628 -14.51478 -14.39675 -14.24474 -14.06067 -13.77866 -13.65230 -13.50849 -13.39180 -12.99277 -12.82082 -12.68463 -12.47596 -12.25404 -12.19902 -12.06566 -11.85085 -11.82967 -11.71409 -11.62931 -11.02641 -10.37339 -10.25958 -9.87277 -9.22657 -4.96723 0.23273 0.42209 1.26313 1.45192 1.59462 1.65159 1.74773 1.98570 2.37897 2.66310 2.75284 2.86624 2.95018 3.37565 3.39122 3.46956 3.50028 3.72202 3.72889 3.78303 3.83877 3.85748 3.88940 3.93064 4.00479 4.02299 4.07101 4.14372 4.21950 4.23526 4.27249 4.37254 4.45754 4.46335 4.54958 4.58147 4.68921 4.70188 4.70525 4.79391 4.84713 4.97042 4.99087 5.04415 5.26520 5.28645 5.38425 5.46630 5.68288 6.25662 6.38125 6.61346 7.01920 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.073 4.073 3 Si 0.687 3.313 4 C -0.038 4.038 5 C -0.161 4.161 6 C -0.072 4.072 7 C -0.202 4.202 8 C 0.134 3.866 9 O -0.315 6.315 10 C 0.074 3.926 11 C -0.142 4.142 12 C 0.522 3.478 13 O -0.536 6.536 14 N -0.726 5.726 15 C 0.141 3.859 16 H 0.094 0.906 17 C -0.125 4.125 18 C -0.117 4.117 19 C -0.134 4.134 20 H 0.117 0.883 21 C 0.453 3.547 22 F -0.181 7.181 23 F -0.183 7.183 24 F -0.183 7.183 25 C -0.116 4.116 26 C -0.122 4.122 27 C -0.122 4.122 28 H 0.383 0.617 29 H 0.076 0.924 30 H -0.250 1.250 31 H -0.255 1.255 32 H 0.120 0.880 33 H 0.130 0.870 34 H 0.134 0.866 35 H 0.073 0.927 36 H 0.073 0.927 37 H 0.108 0.892 38 H 0.108 0.892 39 H 0.403 0.597 40 H 0.078 0.922 41 H 0.070 0.930 42 H 0.082 0.918 43 H 0.081 0.919 44 H 0.085 0.915 45 H 0.082 0.918 46 H 0.075 0.925 47 H 0.080 0.920 48 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.965 -1.080 -5.752 6.174 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.183 4.183 3 Si 0.588 3.412 4 C -0.038 4.038 5 C -0.179 4.179 6 C -0.090 4.090 7 C -0.221 4.221 8 C 0.089 3.911 9 O -0.229 6.229 10 C -0.002 4.002 11 C -0.182 4.182 12 C 0.308 3.692 13 O -0.412 6.412 14 N -0.377 5.377 15 C 0.037 3.963 16 H 0.112 0.888 17 C -0.164 4.164 18 C -0.155 4.155 19 C -0.153 4.153 20 H 0.135 0.865 21 C 0.399 3.601 22 F -0.163 7.163 23 F -0.164 7.164 24 F -0.165 7.165 25 C -0.154 4.154 26 C -0.160 4.160 27 C -0.140 4.140 28 H 0.230 0.770 29 H 0.094 0.906 30 H -0.175 1.175 31 H -0.179 1.179 32 H 0.137 0.863 33 H 0.148 0.852 34 H 0.152 0.848 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.126 0.874 38 H 0.126 0.874 39 H 0.238 0.762 40 H 0.097 0.903 41 H 0.089 0.911 42 H 0.101 0.899 43 H 0.099 0.901 44 H 0.103 0.897 45 H 0.100 0.900 46 H 0.094 0.906 47 H 0.099 0.901 48 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -1.023 -0.471 -4.275 4.421 hybrid contribution -0.010 -1.027 0.409 1.106 sum -1.034 -1.498 -3.867 4.274 Atomic orbital electron populations 1.86504 1.17039 1.81840 1.49682 1.24722 0.85857 1.10497 0.97257 0.95392 0.80745 0.77861 0.87212 1.19111 0.96962 0.93041 0.94685 1.20813 1.02555 0.99157 0.95376 1.20881 0.97584 0.93811 0.96706 1.21376 1.04267 0.95777 1.00630 1.18920 0.95030 0.82676 0.94489 1.85970 1.74492 1.20181 1.42256 1.22422 0.99700 0.91839 0.86213 1.21470 1.04312 0.95039 0.97338 1.20304 0.79379 0.82116 0.87407 1.90762 1.40619 1.62273 1.47573 1.46002 1.58243 1.09734 1.23736 1.21077 0.98332 0.92897 0.84036 0.88833 1.21877 0.98834 1.02086 0.93597 1.21583 1.03554 0.91389 0.98991 1.22567 1.02438 0.98857 0.91454 0.86523 1.20602 0.75996 0.76818 0.86690 1.93188 1.45785 1.83785 1.93519 1.93197 1.66807 1.94951 1.61472 1.93192 1.95308 1.33189 1.94780 1.21571 0.98268 1.02662 0.92921 1.21758 1.02620 0.93727 0.97898 1.20214 1.02791 0.93604 0.97424 0.76961 0.90580 1.17522 1.17949 0.86279 0.85166 0.84795 0.90905 0.90911 0.87385 0.87409 0.76193 0.90341 0.91090 0.89935 0.90057 0.89675 0.89978 0.90628 0.90088 0.84653 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.36 12.81 -35.23 -0.45 -0.81 16 2 C -0.07 -0.04 2.79 36.01 0.10 0.07 16 3 Si 0.69 -0.47 29.85 -169.99 -5.07 -5.55 16 4 C -0.04 -0.12 5.38 -104.64 -0.56 -0.68 16 5 C -0.16 -0.52 8.67 -39.56 -0.34 -0.86 16 6 C -0.07 -0.18 10.04 -39.60 -0.40 -0.58 16 7 C -0.20 -0.53 9.04 -39.43 -0.36 -0.89 16 8 C 0.13 0.45 6.69 -39.22 -0.26 0.18 16 9 O -0.32 -0.74 10.14 -19.43 -0.20 -0.94 16 10 C 0.07 0.04 4.03 37.16 0.15 0.19 16 11 C -0.14 0.29 6.07 -27.89 -0.17 0.12 16 12 C 0.52 -0.20 7.79 -10.99 -0.09 -0.29 16 13 O -0.54 -1.95 15.65 5.55 0.09 -1.87 16 14 N -0.73 2.12 5.08 -53.81 -0.27 1.84 16 15 C 0.14 -0.34 2.45 -67.93 -0.17 -0.50 16 16 H 0.09 -0.03 7.58 -51.93 -0.39 -0.42 16 17 C -0.13 0.27 5.49 -26.73 -0.15 0.13 16 18 C -0.12 0.24 4.96 -26.73 -0.13 0.11 16 19 C -0.13 0.32 2.16 -90.62 -0.20 0.13 16 20 H 0.12 -0.43 8.14 -51.93 -0.42 -0.86 16 21 C 0.45 0.09 2.69 37.16 0.10 0.19 16 22 F -0.18 -0.26 16.28 2.25 0.04 -0.23 16 23 F -0.18 -0.27 16.80 2.25 0.04 -0.24 16 24 F -0.18 -0.22 16.80 2.25 0.04 -0.18 16 25 C -0.12 0.37 4.96 -26.71 -0.13 0.23 16 26 C -0.12 0.51 5.39 -26.71 -0.14 0.36 16 27 C -0.12 -0.41 9.62 -39.44 -0.38 -0.79 16 28 H 0.38 -1.75 8.74 45.56 0.40 -1.35 16 29 H 0.08 -0.10 7.96 -51.93 -0.41 -0.51 16 30 H -0.25 -0.63 7.05 56.52 0.40 -0.23 16 31 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 32 H 0.12 0.30 4.86 -52.49 -0.26 0.04 16 33 H 0.13 0.04 8.06 -52.48 -0.42 -0.38 16 34 H 0.13 0.17 6.30 -52.49 -0.33 -0.16 16 35 H 0.07 0.06 7.62 -51.93 -0.40 -0.34 16 36 H 0.07 0.07 7.62 -51.93 -0.40 -0.33 16 37 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 38 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 39 H 0.40 -2.26 8.60 -40.82 -0.35 -2.61 16 40 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 41 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 42 H 0.08 -0.16 7.80 -51.93 -0.41 -0.56 16 43 H 0.08 -0.10 7.80 -51.93 -0.41 -0.50 16 44 H 0.08 -0.28 7.80 -51.93 -0.41 -0.69 16 45 H 0.08 -0.20 7.80 -51.93 -0.41 -0.61 16 46 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 47 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 48 H 0.14 0.34 8.06 -52.48 -0.42 -0.08 16 LS Contribution 399.39 15.07 6.02 6.02 Total: 0.00 -9.07 399.39 -9.67 -18.74 By element: Atomic # 1 Polarization: -7.14 SS G_CDS: -6.76 Total: -13.90 kcal Atomic # 6 Polarization: 0.23 SS G_CDS: -3.13 Total: -2.89 kcal Atomic # 7 Polarization: 2.12 SS G_CDS: -0.27 Total: 1.84 kcal Atomic # 8 Polarization: -3.06 SS G_CDS: -0.56 Total: -3.62 kcal Atomic # 9 Polarization: -0.75 SS G_CDS: 0.11 Total: -0.64 kcal Atomic # 14 Polarization: -0.47 SS G_CDS: -5.07 Total: -5.55 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -9.07 -9.67 -18.74 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -227.871 kcal (2) G-P(sol) polarization free energy of solvation -9.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -236.944 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.666 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.739 kcal (6) G-S(sol) free energy of system = (1) + (5) -246.609 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds