Wall clock time and date at job start Tue Mar 9 2021 14:21:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86298 * 109.46977 * 2 1 4 4 C 1.50699 * 109.46837 * 120.00094 * 2 1 3 5 5 C 1.38241 * 119.96904 * 244.99762 * 4 2 1 6 6 C 1.38293 * 120.10934 * 180.02562 * 5 4 2 7 7 C 1.38122 * 120.05543 * 0.02562 * 6 5 4 8 8 C 1.38750 * 119.94304 * 359.97438 * 7 6 5 9 9 O 1.35910 * 120.05262 * 180.02562 * 8 7 6 10 10 C 1.42896 * 117.00135 * 0.02562 * 9 8 7 11 11 C 1.50696 * 109.47362 * 179.97438 * 10 9 8 12 12 O 1.21287 * 119.99679 * 0.02562 * 11 10 9 13 13 N 1.34774 * 120.00276 * 179.97438 * 11 10 9 14 14 C 1.46496 * 119.99711 * 179.97438 * 13 11 10 15 15 H 1.08992 * 109.47635 * 324.99626 * 14 13 11 16 16 C 1.53000 * 109.47432 * 85.00102 * 14 13 11 17 17 C 1.52996 * 109.47518 * 179.97438 * 16 14 13 18 18 C 1.52997 * 109.47131 * 300.00172 * 17 16 14 19 19 H 1.09001 * 109.47289 * 299.99950 * 18 17 16 20 20 C 1.53006 * 109.47127 * 179.97438 * 18 17 16 21 21 F 1.39900 * 109.46764 * 299.99647 * 20 18 17 22 22 F 1.39897 * 109.47129 * 59.99625 * 20 18 17 23 23 F 1.39903 * 109.46814 * 180.02562 * 20 18 17 24 24 C 1.52997 * 109.47232 * 59.99874 * 18 17 16 25 25 C 1.52996 * 109.46975 * 299.99763 * 24 18 17 26 26 C 1.38168 * 119.97430 * 65.25730 * 4 2 1 27 27 H 0.96697 * 113.99785 * 300.00251 * 1 2 3 28 28 H 1.09000 * 109.46610 * 239.99932 * 2 1 3 29 29 H 1.48502 * 109.99627 * 178.68151 * 3 2 1 30 30 H 1.48496 * 110.00287 * 299.99638 * 3 2 1 31 31 H 1.07993 * 119.94820 * 0.02562 * 5 4 2 32 32 H 1.08000 * 119.96797 * 179.97438 * 6 5 4 33 33 H 1.07997 * 120.02881 * 179.97438 * 7 6 5 34 34 H 1.08996 * 109.47366 * 59.99312 * 10 9 8 35 35 H 1.09006 * 109.46768 * 299.99786 * 10 9 8 36 36 H 0.96994 * 119.99743 * 359.97438 * 13 11 10 37 37 H 1.09000 * 109.46968 * 299.99559 * 16 14 13 38 38 H 1.09001 * 109.47194 * 59.99360 * 16 14 13 39 39 H 1.08996 * 109.47452 * 180.02562 * 17 16 14 40 40 H 1.09001 * 109.46997 * 59.99746 * 17 16 14 41 41 H 1.09001 * 109.47375 * 60.00133 * 24 18 17 42 42 H 1.09000 * 109.47140 * 180.02562 * 24 18 17 43 43 H 1.09004 * 109.47108 * 180.02562 * 25 24 18 44 44 H 1.09001 * 109.47367 * 299.99815 * 25 24 18 45 45 H 1.08000 * 120.02364 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6387 -0.0117 2.1909 6 6 3.1014 -0.6609 3.3209 7 6 2.8582 -2.0096 3.4923 8 6 2.1484 -2.7131 2.5297 9 8 1.9073 -4.0403 2.6963 10 6 2.4135 -4.6472 3.8869 11 6 2.0516 -6.1100 3.8980 12 8 1.4225 -6.5860 2.9768 13 7 2.4278 -6.8894 4.9312 14 6 2.0755 -8.3113 4.9421 15 1 1.0965 -8.4467 4.4826 16 6 3.1221 -9.1023 4.1549 17 6 2.7545 -10.5874 4.1669 18 6 2.7145 -11.0912 5.6110 19 1 3.6936 -10.9556 6.0704 20 6 2.3462 -12.5763 5.6230 21 9 1.0893 -12.7497 5.0336 22 9 3.3028 -13.2998 4.9029 23 9 2.3090 -13.0368 6.9436 24 6 1.6678 -10.3004 6.3982 25 6 2.0355 -8.8153 6.3863 26 6 1.6891 -2.0607 1.3952 27 1 -0.3933 0.4417 0.7650 28 1 1.7923 -0.5139 -0.8900 29 1 3.5346 1.7702 0.0321 30 1 1.5616 2.4679 -1.2085 31 1 2.8303 1.0428 2.0586 32 1 3.6542 -0.1128 4.0696 33 1 3.2201 -2.5163 4.3747 34 1 1.9768 -4.1585 4.7578 35 1 3.4979 -4.5405 3.9162 36 1 2.9319 -6.5089 5.6673 37 1 3.1508 -8.7431 3.1261 38 1 4.1012 -8.9670 4.6144 39 1 3.5003 -11.1509 3.6064 40 1 1.7753 -10.7230 3.7075 41 1 0.6886 -10.4360 5.9389 42 1 1.6396 -10.6590 7.4272 43 1 1.2901 -8.2519 6.9476 44 1 3.0146 -8.6797 6.8457 45 1 1.1397 -2.6069 0.6427 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_4860298.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:21:29 Heat of formation + Delta-G solvation = -238.666247 kcal Electronic energy + Delta-G solvation = -31632.714205 eV Core-core repulsion = 26587.590692 eV Total energy + Delta-G solvation = -5045.123514 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.138 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -51.08239 -48.56532 -48.54012 -41.66411 -40.96697 -39.59456 -38.77305 -37.22866 -35.66101 -32.55675 -32.29375 -32.17212 -31.38042 -29.20612 -26.89222 -26.27078 -24.20511 -23.72778 -23.31898 -22.37387 -21.69222 -21.25523 -19.40081 -19.31424 -19.23349 -18.71897 -18.49360 -17.86560 -17.51577 -17.32140 -17.10794 -16.82395 -16.17975 -16.05889 -15.74844 -15.54470 -15.42540 -15.16242 -15.14632 -15.01511 -14.94346 -14.75074 -14.71228 -14.70821 -14.57647 -14.17181 -14.04265 -13.90726 -13.69818 -13.56775 -13.43870 -13.00411 -12.70298 -12.60313 -12.47540 -12.23169 -12.19499 -11.98592 -11.84927 -11.70291 -11.62810 -10.94478 -10.48878 -10.28894 -9.98168 -9.31621 -5.04421 0.15305 0.35354 1.23021 1.37531 1.40722 1.63205 1.73458 1.96649 2.45281 2.62043 2.75723 2.86977 2.95305 3.32748 3.42847 3.47101 3.49808 3.60373 3.69171 3.71850 3.81300 3.82684 3.84658 3.91471 3.95961 4.00411 4.06636 4.13977 4.14305 4.31279 4.35623 4.46101 4.49373 4.57853 4.68539 4.69963 4.79350 4.85208 4.91906 4.97364 5.03115 5.18015 5.25110 5.29928 5.39077 5.59874 6.16107 6.31157 6.56777 7.00677 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.071 4.071 3 Si 0.692 3.308 4 C -0.080 4.080 5 C -0.152 4.152 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.129 3.871 9 O -0.288 6.288 10 C 0.040 3.960 11 C 0.516 3.484 12 O -0.509 6.509 13 N -0.725 5.725 14 C 0.143 3.857 15 H 0.095 0.905 16 C -0.126 4.126 17 C -0.117 4.117 18 C -0.134 4.134 19 H 0.117 0.883 20 C 0.453 3.547 21 F -0.181 7.181 22 F -0.183 7.183 23 F -0.183 7.183 24 C -0.116 4.116 25 C -0.122 4.122 26 C -0.120 4.120 27 H 0.379 0.621 28 H 0.115 0.885 29 H -0.257 1.257 30 H -0.254 1.254 31 H 0.130 0.870 32 H 0.132 0.868 33 H 0.130 0.870 34 H 0.095 0.905 35 H 0.094 0.906 36 H 0.402 0.598 37 H 0.079 0.921 38 H 0.071 0.929 39 H 0.082 0.918 40 H 0.081 0.919 41 H 0.082 0.918 42 H 0.085 0.915 43 H 0.081 0.919 44 H 0.075 0.925 45 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.169 4.466 7.240 9.078 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.182 4.182 3 Si 0.594 3.406 4 C -0.080 4.080 5 C -0.170 4.170 6 C -0.091 4.091 7 C -0.225 4.225 8 C 0.084 3.916 9 O -0.201 6.201 10 C -0.038 4.038 11 C 0.301 3.699 12 O -0.382 6.382 13 N -0.378 5.378 14 C 0.039 3.961 15 H 0.113 0.887 16 C -0.165 4.165 17 C -0.155 4.155 18 C -0.153 4.153 19 H 0.135 0.865 20 C 0.399 3.601 21 F -0.163 7.163 22 F -0.164 7.164 23 F -0.165 7.165 24 C -0.154 4.154 25 C -0.160 4.160 26 C -0.139 4.139 27 H 0.227 0.773 28 H 0.133 0.867 29 H -0.182 1.182 30 H -0.179 1.179 31 H 0.147 0.853 32 H 0.150 0.850 33 H 0.148 0.852 34 H 0.113 0.887 35 H 0.112 0.888 36 H 0.237 0.763 37 H 0.097 0.903 38 H 0.089 0.911 39 H 0.101 0.899 40 H 0.100 0.900 41 H 0.101 0.899 42 H 0.104 0.896 43 H 0.100 0.900 44 H 0.094 0.906 45 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 3.149 4.236 5.431 7.573 hybrid contribution 0.563 -0.793 0.533 1.109 sum 3.712 3.443 5.964 7.823 Atomic orbital electron populations 1.86532 1.16844 1.81714 1.49186 1.25139 0.85446 1.10269 0.97298 0.94701 0.81001 0.77744 0.87193 1.20162 0.97739 0.93579 0.96528 1.20929 1.01408 0.99573 0.95106 1.20912 0.97555 0.93608 0.97006 1.21290 1.04722 0.96074 1.00403 1.19041 0.95397 0.82427 0.94781 1.86177 1.73768 1.20095 1.40027 1.22462 1.00650 0.91894 0.88834 1.20048 0.79769 0.87442 0.82648 1.90801 1.37882 1.74778 1.34738 1.45854 1.58627 1.09829 1.23539 1.21083 0.99902 0.78801 0.96280 0.88694 1.21884 0.98996 0.93608 1.01976 1.21584 1.04269 0.96536 0.93150 1.22569 1.03548 0.88228 1.00976 0.86519 1.20597 0.74728 0.91319 0.73461 1.93189 1.42472 1.96414 1.84177 1.93195 1.64183 1.80712 1.78328 1.93193 1.96241 1.90848 1.36202 1.21566 0.98409 0.94327 1.01141 1.21750 1.03283 0.95405 0.95522 1.20283 1.02842 0.93662 0.97121 0.77327 0.86718 1.18228 1.17927 0.85302 0.85045 0.85242 0.88708 0.88775 0.76316 0.90262 0.91071 0.89899 0.89993 0.89913 0.89640 0.90031 0.90617 0.84645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.41 12.84 -35.23 -0.45 -0.86 16 2 C -0.07 -0.01 2.80 36.01 0.10 0.09 16 3 Si 0.69 -0.76 29.80 -169.99 -5.07 -5.83 16 4 C -0.08 -0.04 5.35 -104.65 -0.56 -0.60 16 5 C -0.15 0.13 8.67 -39.56 -0.34 -0.22 16 6 C -0.07 0.10 10.04 -39.60 -0.40 -0.30 16 7 C -0.21 0.17 9.04 -39.43 -0.36 -0.19 16 8 C 0.13 0.20 6.69 -39.22 -0.26 -0.06 16 9 O -0.29 -0.74 9.67 -39.37 -0.38 -1.12 16 10 C 0.04 -0.07 5.22 36.00 0.19 0.12 16 11 C 0.52 0.19 7.87 -10.99 -0.09 0.11 16 12 O -0.51 -2.80 16.16 -14.36 -0.23 -3.03 16 13 N -0.72 2.24 5.08 -53.81 -0.27 1.97 16 14 C 0.14 -0.35 2.45 -67.93 -0.17 -0.52 16 15 H 0.10 -0.02 7.58 -51.93 -0.39 -0.41 16 16 C -0.13 0.28 5.49 -26.73 -0.15 0.13 16 17 C -0.12 0.24 4.96 -26.73 -0.13 0.11 16 18 C -0.13 0.34 2.17 -90.62 -0.20 0.15 16 19 H 0.12 -0.46 8.14 -51.93 -0.42 -0.88 16 20 C 0.45 0.05 2.69 37.16 0.10 0.15 16 21 F -0.18 -0.26 16.28 2.25 0.04 -0.22 16 22 F -0.18 -0.26 16.80 2.25 0.04 -0.23 16 23 F -0.18 -0.19 16.80 2.25 0.04 -0.16 16 24 C -0.12 0.39 4.96 -26.73 -0.13 0.26 16 25 C -0.12 0.54 5.39 -26.73 -0.14 0.40 16 26 C -0.12 -0.26 9.63 -39.43 -0.38 -0.63 16 27 H 0.38 -1.24 8.70 45.56 0.40 -0.84 16 28 H 0.12 0.08 7.96 -51.93 -0.41 -0.33 16 29 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 30 H -0.25 -0.56 7.11 56.52 0.40 -0.16 16 31 H 0.13 -0.37 4.90 -52.49 -0.26 -0.63 16 32 H 0.13 -0.49 8.06 -52.49 -0.42 -0.91 16 33 H 0.13 -0.46 6.30 -52.49 -0.33 -0.79 16 34 H 0.10 -0.40 7.66 -51.93 -0.40 -0.80 16 35 H 0.09 -0.39 7.66 -51.93 -0.40 -0.79 16 36 H 0.40 -2.56 8.60 -40.82 -0.35 -2.91 16 37 H 0.08 0.00 8.14 -51.93 -0.42 -0.43 16 38 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 39 H 0.08 -0.16 7.80 -51.93 -0.41 -0.56 16 40 H 0.08 -0.10 7.80 -51.93 -0.41 -0.50 16 41 H 0.08 -0.21 7.80 -51.93 -0.41 -0.62 16 42 H 0.08 -0.31 7.80 -51.93 -0.41 -0.71 16 43 H 0.08 -0.38 8.14 -51.93 -0.42 -0.81 16 44 H 0.08 -0.43 8.14 -51.93 -0.42 -0.85 16 45 H 0.14 0.39 8.06 -52.49 -0.42 -0.04 16 LS Contribution 378.43 15.07 5.70 5.70 Total: 0.00 -9.89 378.43 -9.43 -19.32 By element: Atomic # 1 Polarization: -8.61 SS G_CDS: -5.92 Total: -14.53 kcal Atomic # 6 Polarization: 1.91 SS G_CDS: -2.92 Total: -1.01 kcal Atomic # 7 Polarization: 2.24 SS G_CDS: -0.27 Total: 1.97 kcal Atomic # 8 Polarization: -3.95 SS G_CDS: -1.06 Total: -5.02 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 0.11 Total: -0.60 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: -5.07 Total: -5.83 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -9.89 -9.43 -19.32 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_4860298.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -219.346 kcal (2) G-P(sol) polarization free energy of solvation -9.893 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -229.240 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.427 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.320 kcal (6) G-S(sol) free energy of system = (1) + (5) -238.666 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds