Wall clock time and date at job start Tue Mar 9 2021 14:21:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37637 * 125.67752 * 2 1 4 4 C 1.46667 * 126.22758 * 359.97438 * 3 2 1 5 5 O 1.21699 * 120.00069 * 5.13670 * 4 3 2 6 6 N 1.34774 * 120.00293 * 185.14514 * 4 3 2 7 7 C 1.46498 * 120.00390 * 174.64758 * 6 4 3 8 8 H 1.08999 * 109.47081 * 325.00099 * 7 6 4 9 9 C 1.52995 * 109.47117 * 84.99710 * 7 6 4 10 10 C 1.53002 * 109.47283 * 180.02562 * 9 7 6 11 11 C 1.52993 * 109.47102 * 300.00310 * 10 9 7 12 12 H 1.09000 * 109.47083 * 299.99416 * 11 10 9 13 13 C 1.53002 * 109.47102 * 180.02562 * 11 10 9 14 14 F 1.39901 * 109.47034 * 299.99529 * 13 11 10 15 15 F 1.39900 * 109.47265 * 60.00023 * 13 11 10 16 16 F 1.39898 * 109.46997 * 179.97438 * 13 11 10 17 17 C 1.52995 * 109.47304 * 59.99703 * 11 10 9 18 18 C 1.52993 * 109.47303 * 205.00041 * 7 6 4 19 19 C 1.37883 * 107.54805 * 180.26118 * 3 2 1 20 20 C 1.39883 * 107.09184 * 359.62029 * 19 3 2 21 21 Br 1.89101 * 126.07273 * 180.11078 * 20 19 3 22 22 C 1.35499 * 107.85207 * 0.37970 * 20 19 3 23 23 C 1.50703 * 125.57295 * 179.78413 * 22 20 19 24 24 O 1.42897 * 109.46958 * 292.16836 * 23 22 20 25 25 Si 1.86304 * 109.46883 * 52.16242 * 23 22 20 26 26 H 1.09000 * 109.47356 * 90.48150 * 1 2 3 27 27 H 1.09003 * 109.47406 * 210.48754 * 1 2 3 28 28 H 1.09002 * 109.46934 * 330.47970 * 1 2 3 29 29 H 0.97006 * 119.99856 * 354.65118 * 6 4 3 30 30 H 1.09003 * 109.47177 * 300.00303 * 9 7 6 31 31 H 1.09000 * 109.47285 * 60.00493 * 9 7 6 32 32 H 1.08999 * 109.47116 * 60.00266 * 10 9 7 33 33 H 1.09000 * 109.47009 * 180.02562 * 10 9 7 34 34 H 1.09003 * 109.47177 * 180.02562 * 17 11 10 35 35 H 1.08999 * 109.46827 * 60.00096 * 17 11 10 36 36 H 1.09000 * 109.47319 * 60.00110 * 18 7 6 37 37 H 1.09000 * 109.47083 * 299.99497 * 18 7 6 38 38 H 1.08004 * 126.45519 * 179.75021 * 19 3 2 39 39 H 1.08990 * 109.47408 * 172.16489 * 23 22 20 40 40 H 0.96701 * 114.00594 * 59.99367 * 24 23 22 41 41 H 1.48501 * 110.00003 * 63.71117 * 25 23 22 42 42 H 1.48501 * 109.99920 * 185.03236 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1180 0.0000 4 6 1.8122 2.5122 -0.0005 5 8 0.6254 2.7646 0.0933 6 7 2.7079 3.5138 -0.1051 7 6 2.2469 4.8993 -0.2238 8 1 1.3247 4.9270 -0.8041 9 6 1.9890 5.4722 1.1712 10 6 1.5070 6.9190 1.0473 11 6 2.5775 7.7546 0.3427 12 1 3.4999 7.7274 0.9229 13 6 2.0958 9.2016 0.2194 14 9 0.9118 9.2370 -0.5250 15 9 1.8604 9.7251 1.4952 16 9 3.0749 9.9658 -0.4244 17 6 2.8354 7.1817 -1.0523 18 6 3.3179 5.7345 -0.9281 19 6 3.5781 0.6890 -0.0060 20 6 3.5528 -0.7096 -0.0008 21 35 5.0608 -1.8505 -0.0023 22 6 2.2558 -1.1016 -0.0004 23 6 1.7712 -2.5286 -0.0001 24 8 2.0991 -3.1432 -1.2477 25 14 2.5921 -3.4628 1.3871 26 1 -0.3634 -0.0086 -1.0276 27 1 -0.3634 -0.8856 0.5214 28 1 -0.3633 0.8943 0.5064 29 1 3.6578 3.3173 -0.1019 30 1 1.2260 4.8771 1.6730 31 1 2.9113 5.4446 1.7516 32 1 0.5846 6.9463 0.4672 33 1 1.3237 7.3273 2.0412 34 1 3.5985 7.7768 -1.5541 35 1 1.9131 7.2090 -1.6324 36 1 3.5016 5.3264 -1.9220 37 1 4.2401 5.7070 -0.3478 38 1 4.4583 1.3149 -0.0114 39 1 0.6905 -2.5453 0.1403 40 1 3.0467 -3.1637 -1.4391 41 1 2.1875 -2.8885 2.6954 42 1 2.2168 -4.8982 1.3246 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_5000100.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:21:38 Heat of formation + Delta-G solvation = -181.629507 kcal Electronic energy + Delta-G solvation = -31332.968981 eV Core-core repulsion = 26331.983185 eV Total energy + Delta-G solvation = -5000.985796 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.044 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -51.08232 -48.56165 -48.54355 -42.92433 -40.98187 -39.25892 -37.87564 -35.84129 -34.52228 -32.72965 -32.16118 -31.58068 -30.83656 -27.49916 -27.42565 -26.03955 -24.20231 -23.65883 -22.74289 -21.58746 -21.34479 -20.54346 -19.37525 -19.23727 -19.05246 -18.66372 -18.23074 -17.48206 -17.30091 -16.62118 -16.34114 -15.82214 -15.72251 -15.56205 -15.52933 -15.19061 -15.14313 -14.94411 -14.90351 -14.73281 -14.70915 -14.67818 -14.58360 -14.46663 -14.02355 -13.94564 -13.81024 -13.69260 -13.49607 -13.28644 -12.70767 -12.57927 -12.46725 -12.29183 -12.19071 -12.03528 -11.84837 -11.67096 -11.61882 -11.09501 -10.83322 -10.31258 -9.90337 -9.37562 -4.93067 0.12267 0.41486 0.89850 1.13389 1.44093 1.62439 1.72836 1.91906 2.13624 2.15859 2.75188 2.87429 2.95826 3.14882 3.36108 3.37675 3.48543 3.51551 3.59125 3.72622 3.80299 3.85463 3.91260 4.00982 4.05324 4.06943 4.15267 4.20422 4.31791 4.35087 4.47112 4.50611 4.58178 4.68790 4.71693 4.80221 4.85765 4.98169 5.04546 5.17943 5.29765 5.52981 5.72970 6.26158 6.29715 6.97569 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.386 5.386 3 C -0.038 4.038 4 C 0.594 3.406 5 O -0.539 6.539 6 N -0.714 5.714 7 C 0.146 3.854 8 H 0.094 0.906 9 C -0.126 4.126 10 C -0.117 4.117 11 C -0.134 4.134 12 H 0.117 0.883 13 C 0.453 3.547 14 F -0.181 7.181 15 F -0.183 7.183 16 F -0.183 7.183 17 C -0.116 4.116 18 C -0.123 4.123 19 C -0.103 4.103 20 C -0.177 4.177 21 Br 0.022 6.978 22 C 0.060 3.940 23 C -0.049 4.049 24 O -0.529 6.529 25 Si 0.652 3.348 26 H 0.085 0.915 27 H 0.085 0.915 28 H 0.114 0.886 29 H 0.404 0.596 30 H 0.079 0.921 31 H 0.071 0.929 32 H 0.081 0.919 33 H 0.082 0.918 34 H 0.085 0.915 35 H 0.082 0.918 36 H 0.082 0.918 37 H 0.076 0.924 38 H 0.159 0.841 39 H 0.117 0.883 40 H 0.380 0.620 41 H -0.246 1.246 42 H -0.235 1.235 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.463 -0.829 -0.067 4.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.058 5.058 3 C -0.152 4.152 4 C 0.382 3.618 5 O -0.417 6.417 6 N -0.365 5.365 7 C 0.042 3.958 8 H 0.112 0.888 9 C -0.164 4.164 10 C -0.155 4.155 11 C -0.154 4.154 12 H 0.135 0.865 13 C 0.399 3.601 14 F -0.163 7.163 15 F -0.164 7.164 16 F -0.165 7.165 17 C -0.154 4.154 18 C -0.161 4.161 19 C -0.130 4.130 20 C -0.263 4.263 21 Br 0.106 6.894 22 C -0.062 4.062 23 C -0.160 4.160 24 O -0.334 6.334 25 Si 0.549 3.451 26 H 0.104 0.896 27 H 0.104 0.896 28 H 0.132 0.868 29 H 0.240 0.760 30 H 0.098 0.902 31 H 0.090 0.910 32 H 0.099 0.901 33 H 0.101 0.899 34 H 0.104 0.896 35 H 0.100 0.900 36 H 0.101 0.899 37 H 0.095 0.905 38 H 0.176 0.824 39 H 0.134 0.866 40 H 0.228 0.772 41 H -0.170 1.170 42 H -0.158 1.158 Dipole moment (debyes) X Y Z Total from point charges 2.956 -1.557 0.653 3.405 hybrid contribution -0.445 0.853 -0.294 1.006 sum 2.511 -0.704 0.360 2.633 Atomic orbital electron populations 1.22483 0.74944 1.05949 1.04902 1.43813 1.07235 1.03961 1.50835 1.20026 0.89765 0.87838 1.17564 1.16822 0.85674 0.83168 0.76157 1.90822 1.16191 1.84593 1.50101 1.45661 1.09853 1.06005 1.74952 1.21088 0.98738 0.79173 0.96802 0.88803 1.21886 1.02633 0.94894 0.97027 1.21582 0.97530 0.94707 1.01671 1.22573 1.02691 0.88778 1.01314 0.86468 1.20604 0.75475 0.90405 0.73629 1.93187 1.48852 1.97046 1.77212 1.93196 1.94574 1.88750 1.39916 1.93193 1.62536 1.78661 1.82076 1.21568 1.03638 0.96055 0.94111 1.21770 0.98334 0.94047 1.01928 1.21167 0.95194 0.92780 1.03852 1.20653 0.90766 0.94617 1.20250 1.96591 1.35022 1.60698 1.97075 1.20964 0.89525 0.89996 1.05687 1.24756 1.04975 0.88900 0.97327 1.86537 1.30309 1.79833 1.36701 0.93809 0.94893 0.80310 0.76111 0.89598 0.89607 0.86811 0.76029 0.90195 0.91001 0.90073 0.89935 0.89618 0.89969 0.89950 0.90485 0.82392 0.86606 0.77170 1.16994 1.15840 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.02 10.35 59.85 0.62 0.60 16 2 N -0.39 -0.39 3.16 -115.59 -0.37 -0.76 16 3 C -0.04 -0.02 6.88 -81.99 -0.56 -0.58 16 4 C 0.59 0.41 7.73 -12.86 -0.10 0.31 16 5 O -0.54 -1.92 14.29 5.19 0.07 -1.85 16 6 N -0.71 1.74 5.06 -55.12 -0.28 1.46 16 7 C 0.15 -0.38 2.41 -67.94 -0.16 -0.54 16 8 H 0.09 -0.07 7.66 -51.93 -0.40 -0.47 16 9 C -0.13 0.30 5.49 -26.73 -0.15 0.16 16 10 C -0.12 0.27 4.96 -26.73 -0.13 0.14 16 11 C -0.13 0.36 2.16 -90.63 -0.20 0.17 16 12 H 0.12 -0.47 8.14 -51.93 -0.42 -0.89 16 13 C 0.45 -0.02 2.69 37.16 0.10 0.08 16 14 F -0.18 -0.22 16.28 2.25 0.04 -0.18 16 15 F -0.18 -0.24 16.80 2.25 0.04 -0.20 16 16 F -0.18 -0.18 16.80 2.25 0.04 -0.14 16 17 C -0.12 0.40 4.96 -26.71 -0.13 0.27 16 18 C -0.12 0.54 5.39 -26.71 -0.14 0.40 16 19 C -0.10 0.10 10.34 -39.10 -0.40 -0.30 16 20 C -0.18 0.04 6.08 -39.94 -0.24 -0.20 16 21 Br 0.02 -0.04 29.39 -68.01 -2.00 -2.04 16 22 C 0.06 0.04 5.52 -81.90 -0.45 -0.41 16 23 C -0.05 -0.02 2.84 36.01 0.10 0.09 16 24 O -0.53 -0.55 12.88 -35.23 -0.45 -1.00 16 25 Si 0.65 0.15 29.36 -169.99 -4.99 -4.84 16 26 H 0.09 -0.06 8.14 -51.93 -0.42 -0.49 16 27 H 0.09 -0.18 6.91 -51.93 -0.36 -0.54 16 28 H 0.11 0.06 6.19 -51.93 -0.32 -0.26 16 29 H 0.40 -1.97 7.50 -40.82 -0.31 -2.28 16 30 H 0.08 -0.03 8.08 -51.93 -0.42 -0.45 16 31 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 32 H 0.08 -0.13 7.80 -51.93 -0.41 -0.53 16 33 H 0.08 -0.18 7.80 -51.93 -0.41 -0.58 16 34 H 0.09 -0.31 7.80 -51.93 -0.41 -0.72 16 35 H 0.08 -0.23 7.80 -51.93 -0.41 -0.64 16 36 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 37 H 0.08 -0.42 8.14 -51.93 -0.42 -0.85 16 38 H 0.16 -0.63 7.45 -52.48 -0.39 -1.02 16 39 H 0.12 -0.04 6.45 -51.93 -0.34 -0.37 16 40 H 0.38 -0.55 7.53 45.56 0.34 -0.21 16 41 H -0.25 -0.62 7.11 56.52 0.40 -0.21 16 42 H -0.24 -0.55 7.11 56.52 0.40 -0.15 16 LS Contribution 365.73 15.07 5.51 5.51 Total: 0.00 -6.62 365.73 -9.37 -15.98 By element: Atomic # 1 Polarization: -7.00 SS G_CDS: -5.12 Total: -12.12 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: -1.86 Total: 0.17 kcal Atomic # 7 Polarization: 1.35 SS G_CDS: -0.64 Total: 0.70 kcal Atomic # 8 Polarization: -2.47 SS G_CDS: -0.38 Total: -2.85 kcal Atomic # 9 Polarization: -0.63 SS G_CDS: 0.11 Total: -0.52 kcal Atomic # 14 Polarization: 0.15 SS G_CDS: -4.99 Total: -4.84 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.00 Total: -2.04 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -6.62 -9.37 -15.98 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_5000100.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -165.646 kcal (2) G-P(sol) polarization free energy of solvation -6.618 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -172.264 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.366 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.983 kcal (6) G-S(sol) free energy of system = (1) + (5) -181.630 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds