Wall clock time and date at job start Tue Mar 9 2021 14:21:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37637 * 125.67752 * 2 1 4 4 C 1.46667 * 126.22758 * 359.97438 * 3 2 1 5 5 O 1.21699 * 120.00069 * 5.13670 * 4 3 2 6 6 N 1.34774 * 120.00293 * 185.14514 * 4 3 2 7 7 C 1.46498 * 120.00390 * 174.64758 * 6 4 3 8 8 H 1.08999 * 109.47081 * 325.00099 * 7 6 4 9 9 C 1.52995 * 109.47117 * 84.99710 * 7 6 4 10 10 C 1.53002 * 109.47283 * 180.02562 * 9 7 6 11 11 C 1.52993 * 109.47102 * 300.00310 * 10 9 7 12 12 H 1.09000 * 109.47083 * 299.99416 * 11 10 9 13 13 C 1.53002 * 109.47102 * 180.02562 * 11 10 9 14 14 F 1.39901 * 109.47034 * 299.99529 * 13 11 10 15 15 F 1.39900 * 109.47265 * 60.00023 * 13 11 10 16 16 F 1.39898 * 109.46997 * 179.97438 * 13 11 10 17 17 C 1.52995 * 109.47304 * 59.99703 * 11 10 9 18 18 C 1.52993 * 109.47303 * 205.00041 * 7 6 4 19 19 C 1.37883 * 107.54805 * 180.26118 * 3 2 1 20 20 C 1.39883 * 107.09184 * 359.62029 * 19 3 2 21 21 Br 1.89101 * 126.07273 * 180.11078 * 20 19 3 22 22 C 1.35499 * 107.85207 * 0.37970 * 20 19 3 23 23 C 1.50703 * 125.57295 * 179.78413 * 22 20 19 24 24 O 1.42897 * 109.46958 * 292.16836 * 23 22 20 25 25 Si 1.86304 * 109.46883 * 52.16242 * 23 22 20 26 26 H 1.09000 * 109.47356 * 90.48150 * 1 2 3 27 27 H 1.09003 * 109.47406 * 210.48754 * 1 2 3 28 28 H 1.09002 * 109.46934 * 330.47970 * 1 2 3 29 29 H 0.97006 * 119.99856 * 354.65118 * 6 4 3 30 30 H 1.09003 * 109.47177 * 300.00303 * 9 7 6 31 31 H 1.09000 * 109.47285 * 60.00493 * 9 7 6 32 32 H 1.08999 * 109.47116 * 60.00266 * 10 9 7 33 33 H 1.09000 * 109.47009 * 180.02562 * 10 9 7 34 34 H 1.09003 * 109.47177 * 180.02562 * 17 11 10 35 35 H 1.08999 * 109.46827 * 60.00096 * 17 11 10 36 36 H 1.09000 * 109.47319 * 60.00110 * 18 7 6 37 37 H 1.09000 * 109.47083 * 299.99497 * 18 7 6 38 38 H 1.08004 * 126.45519 * 179.75021 * 19 3 2 39 39 H 1.08990 * 109.47408 * 172.16489 * 23 22 20 40 40 H 0.96701 * 114.00594 * 59.99367 * 24 23 22 41 41 H 1.48501 * 110.00003 * 63.71117 * 25 23 22 42 42 H 1.48501 * 109.99920 * 185.03236 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1180 0.0000 4 6 1.8122 2.5122 -0.0005 5 8 0.6254 2.7646 0.0933 6 7 2.7079 3.5138 -0.1051 7 6 2.2469 4.8993 -0.2238 8 1 1.3247 4.9270 -0.8041 9 6 1.9890 5.4722 1.1712 10 6 1.5070 6.9190 1.0473 11 6 2.5775 7.7546 0.3427 12 1 3.4999 7.7274 0.9229 13 6 2.0958 9.2016 0.2194 14 9 0.9118 9.2370 -0.5250 15 9 1.8604 9.7251 1.4952 16 9 3.0749 9.9658 -0.4244 17 6 2.8354 7.1817 -1.0523 18 6 3.3179 5.7345 -0.9281 19 6 3.5781 0.6890 -0.0060 20 6 3.5528 -0.7096 -0.0008 21 35 5.0608 -1.8505 -0.0023 22 6 2.2558 -1.1016 -0.0004 23 6 1.7712 -2.5286 -0.0001 24 8 2.0991 -3.1432 -1.2477 25 14 2.5921 -3.4628 1.3871 26 1 -0.3634 -0.0086 -1.0276 27 1 -0.3634 -0.8856 0.5214 28 1 -0.3633 0.8943 0.5064 29 1 3.6578 3.3173 -0.1019 30 1 1.2260 4.8771 1.6730 31 1 2.9113 5.4446 1.7516 32 1 0.5846 6.9463 0.4672 33 1 1.3237 7.3273 2.0412 34 1 3.5985 7.7768 -1.5541 35 1 1.9131 7.2090 -1.6324 36 1 3.5016 5.3264 -1.9220 37 1 4.2401 5.7070 -0.3478 38 1 4.4583 1.3149 -0.0114 39 1 0.6905 -2.5453 0.1403 40 1 3.0467 -3.1637 -1.4391 41 1 2.1875 -2.8885 2.6954 42 1 2.2168 -4.8982 1.3246 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12301704_5000100.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:21:37 Heat of formation + Delta-G solvation = -177.648476 kcal Electronic energy + Delta-G solvation = -31332.796351 eV Core-core repulsion = 26331.983185 eV Total energy + Delta-G solvation = -5000.813166 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.044 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -51.11894 -48.60963 -48.59806 -42.88679 -40.89172 -39.17172 -37.91003 -35.77563 -34.46606 -32.66463 -31.92806 -31.48458 -30.78155 -27.46417 -27.38718 -25.98940 -24.00473 -23.58374 -22.64028 -21.46054 -21.25983 -20.50239 -19.37847 -19.26314 -19.01004 -18.59638 -18.21942 -17.44775 -17.25193 -16.61024 -16.27383 -15.80200 -15.66285 -15.56410 -15.52826 -15.12125 -15.09095 -14.95341 -14.89813 -14.76680 -14.76133 -14.63449 -14.48027 -14.38812 -14.12545 -13.85888 -13.67832 -13.55547 -13.27947 -13.22147 -12.61301 -12.48679 -12.39899 -12.21607 -12.08416 -11.99610 -11.62854 -11.59061 -11.44518 -11.10660 -10.86512 -10.22517 -9.84120 -9.34639 -4.98564 0.13675 0.47727 0.91212 1.15344 1.46371 1.55901 1.77711 1.85795 2.15062 2.24149 2.81699 2.96208 3.04433 3.16890 3.40223 3.52110 3.61550 3.65736 3.67002 3.84146 3.90122 4.07572 4.10997 4.11158 4.23274 4.25455 4.27563 4.38174 4.39811 4.52619 4.57721 4.69360 4.72307 4.87689 4.98734 5.06085 5.07378 5.20437 5.23011 5.28905 5.44232 5.58176 5.75887 6.38237 6.41646 7.05910 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.057 3.943 2 N -0.397 5.397 3 C -0.055 4.055 4 C 0.591 3.409 5 O -0.576 6.576 6 N -0.697 5.697 7 C 0.147 3.853 8 H 0.070 0.930 9 C -0.119 4.119 10 C -0.114 4.114 11 C -0.125 4.125 12 H 0.139 0.861 13 C 0.447 3.553 14 F -0.192 7.192 15 F -0.193 7.193 16 F -0.189 7.189 17 C -0.115 4.115 18 C -0.113 4.113 19 C -0.092 4.092 20 C -0.184 4.184 21 Br 0.041 6.959 22 C 0.048 3.952 23 C -0.051 4.051 24 O -0.540 6.540 25 Si 0.707 3.293 26 H 0.086 0.914 27 H 0.100 0.900 28 H 0.101 0.899 29 H 0.419 0.581 30 H 0.056 0.944 31 H 0.089 0.911 32 H 0.067 0.933 33 H 0.080 0.920 34 H 0.093 0.907 35 H 0.071 0.929 36 H 0.089 0.911 37 H 0.100 0.900 38 H 0.190 0.810 39 H 0.119 0.881 40 H 0.389 0.611 41 H -0.278 1.278 42 H -0.265 1.265 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.641 -0.797 -0.324 6.696 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.071 5.071 3 C -0.169 4.169 4 C 0.379 3.621 5 O -0.458 6.458 6 N -0.348 5.348 7 C 0.042 3.958 8 H 0.089 0.911 9 C -0.157 4.157 10 C -0.153 4.153 11 C -0.144 4.144 12 H 0.157 0.843 13 C 0.393 3.607 14 F -0.174 7.174 15 F -0.174 7.174 16 F -0.170 7.170 17 C -0.153 4.153 18 C -0.151 4.151 19 C -0.118 4.118 20 C -0.270 4.270 21 Br 0.125 6.875 22 C -0.074 4.074 23 C -0.161 4.161 24 O -0.347 6.347 25 Si 0.609 3.391 26 H 0.104 0.896 27 H 0.118 0.882 28 H 0.120 0.880 29 H 0.257 0.743 30 H 0.075 0.925 31 H 0.107 0.893 32 H 0.086 0.914 33 H 0.099 0.901 34 H 0.112 0.888 35 H 0.090 0.910 36 H 0.108 0.892 37 H 0.118 0.882 38 H 0.207 0.793 39 H 0.137 0.863 40 H 0.239 0.761 41 H -0.204 1.204 42 H -0.191 1.191 Dipole moment (debyes) X Y Z Total from point charges 5.183 -1.509 0.379 5.412 hybrid contribution -1.132 0.851 -0.201 1.430 sum 4.051 -0.659 0.178 4.108 Atomic orbital electron populations 1.22485 0.74851 1.06036 1.04974 1.43974 1.07605 1.04318 1.51158 1.20206 0.90464 0.87679 1.18589 1.16987 0.85495 0.83787 0.75869 1.90806 1.17808 1.85093 1.52058 1.45546 1.10263 1.05472 1.73517 1.21080 0.98747 0.79325 0.96603 0.91130 1.21800 1.02611 0.94210 0.97107 1.21530 0.97329 0.94953 1.01438 1.22605 1.03057 0.86594 1.02115 0.84321 1.21063 0.75046 0.91581 0.72999 1.93163 1.49621 1.97146 1.77476 1.93173 1.94638 1.89068 1.40534 1.93176 1.62645 1.79050 1.82175 1.21584 1.03495 0.96794 0.93448 1.21723 0.98217 0.92663 1.02449 1.21555 0.95476 0.92754 1.02038 1.20855 0.90937 0.95313 1.19871 1.96604 1.33836 1.60177 1.96925 1.21071 0.90062 0.89940 1.06333 1.24782 1.05248 0.89008 0.97084 1.86512 1.31379 1.79921 1.36915 0.93141 0.94365 0.77569 0.74057 0.89571 0.88177 0.88029 0.74268 0.92547 0.89257 0.91391 0.90112 0.88813 0.91038 0.89216 0.88187 0.79325 0.86314 0.76057 1.20377 1.19072 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.04 10.35 127.77 1.32 1.36 16 2 N -0.40 -1.05 3.16 -519.62 -1.64 -2.69 16 3 C -0.06 -0.06 6.88 40.35 0.28 0.22 16 4 C 0.59 1.15 7.73 86.44 0.67 1.81 16 5 O -0.58 -5.20 14.29 -4.35 -0.06 -5.26 16 6 N -0.70 3.84 5.06 -446.53 -2.26 1.58 16 7 C 0.15 -0.78 2.41 44.99 0.11 -0.68 16 8 H 0.07 -0.01 7.66 -2.39 -0.02 -0.03 16 9 C -0.12 0.57 5.49 30.59 0.17 0.73 16 10 C -0.11 0.48 4.96 30.59 0.15 0.63 16 11 C -0.12 0.75 2.16 -10.80 -0.02 0.72 16 12 H 0.14 -1.40 8.14 -2.39 -0.02 -1.41 16 13 C 0.45 0.06 2.69 71.98 0.19 0.26 16 14 F -0.19 -0.65 16.28 44.97 0.73 0.08 16 15 F -0.19 -0.58 16.80 44.97 0.76 0.18 16 16 F -0.19 -0.34 16.80 44.97 0.76 0.42 16 17 C -0.12 0.89 4.96 30.61 0.15 1.04 16 18 C -0.11 1.18 5.39 30.61 0.17 1.35 16 19 C -0.09 0.30 10.34 22.58 0.23 0.54 16 20 C -0.18 0.24 6.08 22.03 0.13 0.37 16 21 Br 0.04 -0.19 29.39 -20.37 -0.60 -0.79 16 22 C 0.05 0.07 5.52 41.34 0.23 0.30 16 23 C -0.05 -0.05 2.84 71.24 0.20 0.15 16 24 O -0.54 -1.09 12.88 -148.98 -1.92 -3.01 16 25 Si 0.71 0.70 29.36 68.60 2.01 2.71 16 26 H 0.09 0.01 8.14 -2.39 -0.02 -0.01 16 27 H 0.10 -0.31 6.91 -2.39 -0.02 -0.33 16 28 H 0.10 0.34 6.19 -2.39 -0.01 0.32 16 29 H 0.42 -4.93 7.50 -92.70 -0.70 -5.63 16 30 H 0.06 0.03 8.08 -2.39 -0.02 0.02 16 31 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 32 H 0.07 -0.10 7.80 -2.39 -0.02 -0.12 16 33 H 0.08 -0.30 7.80 -2.39 -0.02 -0.32 16 34 H 0.09 -0.82 7.80 -2.39 -0.02 -0.84 16 35 H 0.07 -0.38 7.80 -2.39 -0.02 -0.40 16 36 H 0.09 -1.00 8.14 -2.39 -0.02 -1.01 16 37 H 0.10 -1.44 8.14 -2.39 -0.02 -1.46 16 38 H 0.19 -2.02 7.45 -2.91 -0.02 -2.04 16 39 H 0.12 -0.01 6.45 -2.39 -0.02 -0.03 16 40 H 0.39 -1.28 7.53 -74.06 -0.56 -1.83 16 41 H -0.28 -1.72 7.11 99.48 0.71 -1.02 16 42 H -0.27 -1.54 7.11 99.48 0.71 -0.84 16 Total: 0.00 -17.34 365.73 1.64 -15.70 By element: Atomic # 1 Polarization: -17.60 SS G_CDS: -0.12 Total: -17.71 kcal Atomic # 6 Polarization: 4.83 SS G_CDS: 3.98 Total: 8.81 kcal Atomic # 7 Polarization: 2.79 SS G_CDS: -3.90 Total: -1.12 kcal Atomic # 8 Polarization: -6.29 SS G_CDS: -1.98 Total: -8.27 kcal Atomic # 9 Polarization: -1.57 SS G_CDS: 2.24 Total: 0.67 kcal Atomic # 14 Polarization: 0.70 SS G_CDS: 2.01 Total: 2.71 kcal Atomic # 35 Polarization: -0.19 SS G_CDS: -0.60 Total: -0.79 kcal Total: -17.34 1.64 -15.70 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_5000100.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -161.952 kcal (2) G-P(sol) polarization free energy of solvation -17.335 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -179.287 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.638 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.697 kcal (6) G-S(sol) free energy of system = (1) + (5) -177.648 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds