Wall clock time and date at job start Tue Mar 9 2021 14:21:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35963 * 117.00418 * 2 1 4 4 C 1.39447 * 120.12375 * 179.97438 * 3 2 1 5 5 O 1.34773 * 133.24006 * 0.29370 * 4 3 2 6 6 C 1.34936 * 110.83992 * 180.11437 * 5 4 3 7 7 C 1.46991 * 125.13963 * 179.85326 * 6 5 4 8 8 O 1.21651 * 119.99605 * 179.69620 * 7 6 5 9 9 N 1.34779 * 119.99932 * 359.68831 * 7 6 5 10 10 C 1.46500 * 119.99793 * 180.02562 * 9 7 6 11 11 H 1.09002 * 109.47092 * 325.00176 * 10 9 7 12 12 C 1.53005 * 109.47094 * 84.99912 * 10 9 7 13 13 C 1.52999 * 109.47159 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47317 * 300.00546 * 13 12 10 15 15 H 1.09002 * 109.47153 * 299.99641 * 14 13 12 16 16 C 1.53002 * 109.46817 * 179.97438 * 14 13 12 17 17 F 1.39895 * 109.47052 * 299.99383 * 16 14 13 18 18 F 1.39889 * 109.47380 * 59.99956 * 16 14 13 19 19 F 1.39906 * 109.46680 * 179.97438 * 16 14 13 20 20 C 1.53000 * 109.47060 * 59.99960 * 14 13 12 21 21 C 1.52997 * 109.47007 * 205.00228 * 10 9 7 22 22 C 1.35810 * 109.71893 * 359.58312 * 6 5 4 23 23 C 1.40612 * 119.13546 * 179.97438 * 4 3 2 24 24 C 1.39773 * 120.12150 * 0.02562 * 23 4 3 25 25 C 1.50699 * 120.09742 * 180.02562 * 24 23 4 26 26 O 1.42904 * 109.46548 * 284.99833 * 25 24 23 27 27 Si 1.86294 * 109.47510 * 164.99802 * 25 24 23 28 28 C 1.36636 * 119.81032 * 359.97206 * 24 23 4 29 29 C 1.38258 * 120.11558 * 359.97262 * 3 2 1 30 30 H 1.08999 * 109.47195 * 60.00272 * 1 2 3 31 31 H 1.08998 * 109.47117 * 180.02562 * 1 2 3 32 32 H 1.09002 * 109.46982 * 300.00167 * 1 2 3 33 33 H 0.97004 * 119.99983 * 0.02562 * 9 7 6 34 34 H 1.09000 * 109.47360 * 300.00194 * 12 10 9 35 35 H 1.09002 * 109.46935 * 60.00169 * 12 10 9 36 36 H 1.08996 * 109.46929 * 179.97438 * 13 12 10 37 37 H 1.09002 * 109.46716 * 60.00455 * 13 12 10 38 38 H 1.08992 * 109.47399 * 59.99823 * 20 14 13 39 39 H 1.09004 * 109.46724 * 180.02562 * 20 14 13 40 40 H 1.08993 * 109.47194 * 59.99623 * 21 10 9 41 41 H 1.09002 * 109.46695 * 299.99637 * 21 10 9 42 42 H 1.07994 * 126.95912 * 180.20727 * 22 6 5 43 43 H 1.08993 * 109.47149 * 44.98925 * 25 24 23 44 44 H 0.96703 * 114.00219 * 299.99685 * 26 25 24 45 45 H 1.48499 * 110.00001 * 58.67802 * 27 25 24 46 46 H 1.48499 * 109.99933 * 179.97438 * 27 25 24 47 47 H 1.08001 * 119.75022 * 180.02562 * 28 24 23 48 48 H 1.08006 * 119.66721 * 0.02777 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2873 0.0005 5 8 4.4141 0.3572 -0.0039 6 6 5.6318 0.9385 0.0016 7 6 6.9131 0.2182 0.0020 8 8 7.9595 0.8386 0.0017 9 7 6.9286 -1.1295 0.0030 10 6 8.2057 -1.8473 0.0039 11 1 8.9351 -1.2919 -0.5856 12 6 8.7113 -1.9866 1.4413 13 6 10.0448 -2.7368 1.4424 14 6 9.8485 -4.1267 0.8338 15 1 9.1189 -4.6818 1.4234 16 6 11.1821 -4.8767 0.8343 17 9 12.1181 -4.1641 0.0772 18 9 11.6449 -5.0041 2.1483 19 9 11.0025 -6.1479 0.2783 20 6 9.3429 -3.9874 -0.6036 21 6 8.0099 -3.2372 -0.6049 22 6 5.4945 2.2896 0.0007 23 6 4.0555 2.5509 0.0000 24 6 3.2767 3.7116 -0.0006 25 6 3.9382 5.0656 -0.0017 26 8 4.4610 5.3413 1.2993 27 14 2.6865 6.3681 -0.4569 28 6 1.9137 3.6150 -0.0011 29 6 1.2957 2.3725 -0.0006 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0276 0.0005 32 1 -0.3633 0.5139 0.8900 33 1 6.0941 -1.6241 0.0030 34 1 8.8508 -0.9964 1.8750 35 1 7.9819 -2.5420 2.0308 36 1 10.4052 -2.8356 2.4663 37 1 10.7744 -2.1817 0.8528 38 1 10.0725 -3.4323 -1.1931 39 1 9.2026 -4.9776 -1.0370 40 1 7.6497 -3.1379 -1.6287 41 1 7.2805 -3.7926 -0.0152 42 1 6.2874 3.0228 0.0011 43 1 4.7504 5.0724 -0.7285 44 1 3.7925 5.3510 1.9980 45 1 1.5582 6.3475 0.5084 46 1 3.3264 7.7081 -0.4609 47 1 1.3129 4.5124 -0.0020 48 1 0.2174 2.3120 -0.0006 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12301704_6672420.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:21:54 Heat of formation + Delta-G solvation = -228.768970 kcal Electronic energy + Delta-G solvation = -37867.217089 eV Core-core repulsion = 32247.388280 eV Total energy + Delta-G solvation = -5619.828808 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.138 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -51.05115 -48.53065 -48.51112 -43.68802 -41.23124 -40.61278 -39.32339 -39.13687 -37.11299 -35.70518 -33.58675 -32.22490 -32.12587 -31.72909 -30.73122 -28.73240 -26.82566 -26.28923 -24.84064 -24.14193 -23.98183 -22.86312 -21.91276 -21.67692 -21.34935 -19.81207 -19.26358 -19.19731 -18.98528 -18.67753 -18.55784 -17.92641 -17.69832 -17.40149 -17.02682 -16.68613 -16.28891 -16.19096 -15.91936 -15.84052 -15.61370 -15.48951 -15.13281 -15.09749 -14.91117 -14.80030 -14.69297 -14.67591 -14.66815 -14.56317 -14.51143 -14.12759 -13.85703 -13.70750 -13.49244 -13.45777 -13.42782 -13.34879 -12.67092 -12.64882 -12.42532 -12.37805 -12.18422 -12.16031 -11.81764 -11.69922 -11.61620 -11.36242 -10.96665 -10.63386 -10.30266 -9.79557 -9.01924 -5.01903 -0.61156 0.09465 0.69057 1.19104 1.27075 1.50278 1.73287 1.90017 1.91375 2.02390 2.03431 2.37899 2.77861 2.90878 2.99280 3.18716 3.34603 3.43949 3.48442 3.53940 3.58190 3.76163 3.80894 3.84552 3.87597 3.93583 3.99644 4.04414 4.06207 4.06605 4.11394 4.15900 4.19494 4.39765 4.42503 4.44610 4.46619 4.51012 4.71060 4.75754 4.81023 4.84352 4.86923 4.89390 5.00929 5.04697 5.05639 5.20683 5.23488 5.31752 5.60627 6.12393 6.29673 6.37033 6.90083 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.151 3.849 4 C 0.046 3.954 5 O -0.174 6.174 6 C -0.025 4.025 7 C 0.604 3.396 8 O -0.507 6.507 9 N -0.714 5.714 10 C 0.141 3.859 11 H 0.098 0.902 12 C -0.127 4.127 13 C -0.117 4.117 14 C -0.134 4.134 15 H 0.117 0.883 16 C 0.453 3.547 17 F -0.181 7.181 18 F -0.183 7.183 19 F -0.183 7.183 20 C -0.116 4.116 21 C -0.123 4.123 22 C -0.103 4.103 23 C -0.082 4.082 24 C -0.095 4.095 25 C -0.073 4.073 26 O -0.525 6.525 27 Si 0.692 3.308 28 C -0.096 4.096 29 C -0.177 4.177 30 H 0.061 0.939 31 H 0.105 0.895 32 H 0.060 0.940 33 H 0.409 0.591 34 H 0.080 0.920 35 H 0.072 0.928 36 H 0.083 0.917 37 H 0.082 0.918 38 H 0.082 0.918 39 H 0.085 0.915 40 H 0.082 0.918 41 H 0.076 0.924 42 H 0.175 0.825 43 H 0.119 0.881 44 H 0.375 0.625 45 H -0.258 1.258 46 H -0.255 1.255 47 H 0.140 0.860 48 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.952 -0.747 -1.879 8.205 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.105 3.895 4 C -0.002 4.002 5 O -0.076 6.076 6 C -0.075 4.075 7 C 0.389 3.611 8 O -0.383 6.383 9 N -0.365 5.365 10 C 0.037 3.963 11 H 0.116 0.884 12 C -0.165 4.165 13 C -0.155 4.155 14 C -0.154 4.154 15 H 0.135 0.865 16 C 0.399 3.601 17 F -0.163 7.163 18 F -0.164 7.164 19 F -0.165 7.165 20 C -0.154 4.154 21 C -0.161 4.161 22 C -0.123 4.123 23 C -0.083 4.083 24 C -0.095 4.095 25 C -0.183 4.183 26 O -0.331 6.331 27 Si 0.593 3.407 28 C -0.114 4.114 29 C -0.196 4.196 30 H 0.080 0.920 31 H 0.124 0.876 32 H 0.078 0.922 33 H 0.244 0.756 34 H 0.099 0.901 35 H 0.090 0.910 36 H 0.101 0.899 37 H 0.100 0.900 38 H 0.101 0.899 39 H 0.104 0.896 40 H 0.101 0.899 41 H 0.095 0.905 42 H 0.192 0.808 43 H 0.137 0.863 44 H 0.223 0.777 45 H -0.183 1.183 46 H -0.180 1.180 47 H 0.158 0.842 48 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -6.973 -0.073 -1.970 7.246 hybrid contribution -0.377 -0.562 1.277 1.445 sum -7.350 -0.635 -0.693 7.410 Atomic orbital electron populations 1.23191 0.77295 1.04769 1.01804 1.86170 1.22170 1.25690 1.88365 1.17742 0.86504 0.85884 0.99409 1.18772 0.87439 0.86971 1.07035 1.84049 1.12654 1.34716 1.76135 1.21965 0.83890 0.92596 1.09061 1.16616 0.85432 0.82148 0.76920 1.90928 1.30284 1.67421 1.49698 1.45950 1.10368 1.05677 1.74473 1.21163 0.85336 0.92639 0.97170 0.88426 1.21896 0.96371 1.01720 0.96552 1.21579 0.98829 0.92643 1.02412 1.22578 0.92710 0.98631 1.01472 0.86487 1.20593 0.88032 0.77952 0.73501 1.93186 1.68633 1.78045 1.76393 1.93192 1.90510 1.95978 1.36752 1.93194 1.95429 1.42294 1.85571 1.21554 0.97717 1.02463 0.93621 1.21749 0.97598 0.94248 1.02483 1.22755 0.94773 0.94337 1.00484 1.19407 0.92624 0.92048 1.04205 1.19405 0.92814 0.94335 1.02979 1.25030 1.06850 0.97929 0.88503 1.86642 1.37580 1.92636 1.16269 0.94893 0.77539 0.77906 0.90393 1.20593 0.93491 0.97814 0.99479 1.20972 1.00371 0.90536 1.07762 0.92002 0.87630 0.92164 0.75603 0.90147 0.90962 0.89865 0.89955 0.89886 0.89621 0.89923 0.90526 0.80806 0.86337 0.77707 1.18321 1.17965 0.84238 0.83493 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 101.05 0.99 0.92 16 2 O -0.31 -0.28 10.50 -19.62 -0.21 -0.48 16 3 C 0.15 0.18 6.70 -39.12 -0.26 -0.09 16 4 C 0.05 0.12 7.35 -38.24 -0.28 -0.16 16 5 O -0.17 -0.46 10.28 2.64 0.03 -0.43 16 6 C -0.02 -0.06 7.07 -36.91 -0.26 -0.32 16 7 C 0.60 1.38 7.76 -12.71 -0.10 1.28 16 8 O -0.51 -2.58 16.49 5.23 0.09 -2.49 16 9 N -0.71 0.46 5.07 -55.02 -0.28 0.18 16 10 C 0.14 -0.21 2.45 -67.93 -0.17 -0.37 16 11 H 0.10 0.00 7.58 -51.93 -0.39 -0.39 16 12 C -0.13 0.19 5.50 -26.73 -0.15 0.05 16 13 C -0.12 0.20 4.96 -26.73 -0.13 0.07 16 14 C -0.13 0.28 2.17 -90.62 -0.20 0.08 16 15 H 0.12 -0.39 8.14 -51.93 -0.42 -0.81 16 16 C 0.45 0.19 2.69 37.16 0.10 0.29 16 17 F -0.18 -0.29 16.28 2.25 0.04 -0.25 16 18 F -0.18 -0.31 16.80 2.25 0.04 -0.27 16 19 F -0.18 -0.26 16.80 2.25 0.04 -0.22 16 20 C -0.12 0.32 4.96 -26.75 -0.13 0.19 16 21 C -0.12 0.41 5.39 -26.75 -0.14 0.27 16 22 C -0.10 -0.25 10.68 -37.23 -0.40 -0.65 16 23 C -0.08 -0.17 6.16 -105.21 -0.65 -0.82 16 24 C -0.09 -0.03 5.26 -104.63 -0.55 -0.58 16 25 C -0.07 0.02 2.70 36.01 0.10 0.12 16 26 O -0.53 -0.62 12.88 -35.23 -0.45 -1.07 16 27 Si 0.69 -1.16 30.25 -169.99 -5.14 -6.30 16 28 C -0.10 0.11 8.62 -39.96 -0.34 -0.24 16 29 C -0.18 0.18 9.03 -39.38 -0.36 -0.17 16 30 H 0.06 -0.27 7.66 -51.93 -0.40 -0.67 16 31 H 0.11 -0.47 8.14 -51.93 -0.42 -0.89 16 32 H 0.06 -0.25 7.66 -51.93 -0.40 -0.65 16 33 H 0.41 -0.91 8.32 -40.82 -0.34 -1.25 16 34 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 36 H 0.08 -0.14 7.80 -51.93 -0.41 -0.54 16 37 H 0.08 -0.09 7.80 -51.93 -0.41 -0.50 16 38 H 0.08 -0.19 7.80 -51.93 -0.41 -0.59 16 39 H 0.09 -0.26 7.80 -51.93 -0.41 -0.66 16 40 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 41 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 42 H 0.17 0.33 8.06 -52.49 -0.42 -0.10 16 43 H 0.12 -0.08 7.96 -51.93 -0.41 -0.50 16 44 H 0.38 -0.67 8.70 45.56 0.40 -0.27 16 45 H -0.26 0.12 6.69 56.52 0.38 0.50 16 46 H -0.25 -0.46 7.11 56.52 0.40 -0.05 16 47 H 0.14 -0.42 4.81 -52.49 -0.25 -0.67 16 48 H 0.15 -0.55 6.26 -52.48 -0.33 -0.88 16 LS Contribution 405.46 15.07 6.11 6.11 Total: 0.00 -8.15 405.46 -8.60 -16.75 By element: Atomic # 1 Polarization: -5.44 SS G_CDS: -5.93 Total: -11.37 kcal Atomic # 6 Polarization: 2.78 SS G_CDS: -2.93 Total: -0.15 kcal Atomic # 7 Polarization: 0.46 SS G_CDS: -0.28 Total: 0.18 kcal Atomic # 8 Polarization: -3.93 SS G_CDS: -0.55 Total: -4.48 kcal Atomic # 9 Polarization: -0.86 SS G_CDS: 0.11 Total: -0.74 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.14 Total: -6.30 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -8.15 -8.60 -16.75 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_6672420.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -212.019 kcal (2) G-P(sol) polarization free energy of solvation -8.148 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -220.167 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.602 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.750 kcal (6) G-S(sol) free energy of system = (1) + (5) -228.769 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds