Wall clock time and date at job start Tue Mar 9 2021 14:21:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35963 * 117.00418 * 2 1 4 4 C 1.39447 * 120.12375 * 179.97438 * 3 2 1 5 5 O 1.34773 * 133.24006 * 0.29370 * 4 3 2 6 6 C 1.34936 * 110.83992 * 180.11437 * 5 4 3 7 7 C 1.46991 * 125.13963 * 179.85326 * 6 5 4 8 8 O 1.21651 * 119.99605 * 179.69620 * 7 6 5 9 9 N 1.34779 * 119.99932 * 359.68831 * 7 6 5 10 10 C 1.46500 * 119.99793 * 180.02562 * 9 7 6 11 11 H 1.09002 * 109.47092 * 325.00176 * 10 9 7 12 12 C 1.53005 * 109.47094 * 84.99912 * 10 9 7 13 13 C 1.52999 * 109.47159 * 179.97438 * 12 10 9 14 14 C 1.52997 * 109.47317 * 300.00546 * 13 12 10 15 15 H 1.09002 * 109.47153 * 299.99641 * 14 13 12 16 16 C 1.53002 * 109.46817 * 179.97438 * 14 13 12 17 17 F 1.39895 * 109.47052 * 299.99383 * 16 14 13 18 18 F 1.39889 * 109.47380 * 59.99956 * 16 14 13 19 19 F 1.39906 * 109.46680 * 179.97438 * 16 14 13 20 20 C 1.53000 * 109.47060 * 59.99960 * 14 13 12 21 21 C 1.52997 * 109.47007 * 205.00228 * 10 9 7 22 22 C 1.35810 * 109.71893 * 359.58312 * 6 5 4 23 23 C 1.40612 * 119.13546 * 179.97438 * 4 3 2 24 24 C 1.39773 * 120.12150 * 0.02562 * 23 4 3 25 25 C 1.50699 * 120.09742 * 180.02562 * 24 23 4 26 26 O 1.42904 * 109.46548 * 284.99833 * 25 24 23 27 27 Si 1.86294 * 109.47510 * 164.99802 * 25 24 23 28 28 C 1.36636 * 119.81032 * 359.97206 * 24 23 4 29 29 C 1.38258 * 120.11558 * 359.97262 * 3 2 1 30 30 H 1.08999 * 109.47195 * 60.00272 * 1 2 3 31 31 H 1.08998 * 109.47117 * 180.02562 * 1 2 3 32 32 H 1.09002 * 109.46982 * 300.00167 * 1 2 3 33 33 H 0.97004 * 119.99983 * 0.02562 * 9 7 6 34 34 H 1.09000 * 109.47360 * 300.00194 * 12 10 9 35 35 H 1.09002 * 109.46935 * 60.00169 * 12 10 9 36 36 H 1.08996 * 109.46929 * 179.97438 * 13 12 10 37 37 H 1.09002 * 109.46716 * 60.00455 * 13 12 10 38 38 H 1.08992 * 109.47399 * 59.99823 * 20 14 13 39 39 H 1.09004 * 109.46724 * 180.02562 * 20 14 13 40 40 H 1.08993 * 109.47194 * 59.99623 * 21 10 9 41 41 H 1.09002 * 109.46695 * 299.99637 * 21 10 9 42 42 H 1.07994 * 126.95912 * 180.20727 * 22 6 5 43 43 H 1.08993 * 109.47149 * 44.98925 * 25 24 23 44 44 H 0.96703 * 114.00219 * 299.99685 * 26 25 24 45 45 H 1.48499 * 110.00001 * 58.67802 * 27 25 24 46 46 H 1.48499 * 109.99933 * 179.97438 * 27 25 24 47 47 H 1.08001 * 119.75022 * 180.02562 * 28 24 23 48 48 H 1.08006 * 119.66721 * 0.02777 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2873 0.0005 5 8 4.4141 0.3572 -0.0039 6 6 5.6318 0.9385 0.0016 7 6 6.9131 0.2182 0.0020 8 8 7.9595 0.8386 0.0017 9 7 6.9286 -1.1295 0.0030 10 6 8.2057 -1.8473 0.0039 11 1 8.9351 -1.2919 -0.5856 12 6 8.7113 -1.9866 1.4413 13 6 10.0448 -2.7368 1.4424 14 6 9.8485 -4.1267 0.8338 15 1 9.1189 -4.6818 1.4234 16 6 11.1821 -4.8767 0.8343 17 9 12.1181 -4.1641 0.0772 18 9 11.6449 -5.0041 2.1483 19 9 11.0025 -6.1479 0.2783 20 6 9.3429 -3.9874 -0.6036 21 6 8.0099 -3.2372 -0.6049 22 6 5.4945 2.2896 0.0007 23 6 4.0555 2.5509 0.0000 24 6 3.2767 3.7116 -0.0006 25 6 3.9382 5.0656 -0.0017 26 8 4.4610 5.3413 1.2993 27 14 2.6865 6.3681 -0.4569 28 6 1.9137 3.6150 -0.0011 29 6 1.2957 2.3725 -0.0006 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0276 0.0005 32 1 -0.3633 0.5139 0.8900 33 1 6.0941 -1.6241 0.0030 34 1 8.8508 -0.9964 1.8750 35 1 7.9819 -2.5420 2.0308 36 1 10.4052 -2.8356 2.4663 37 1 10.7744 -2.1817 0.8528 38 1 10.0725 -3.4323 -1.1931 39 1 9.2026 -4.9776 -1.0370 40 1 7.6497 -3.1379 -1.6287 41 1 7.2805 -3.7926 -0.0152 42 1 6.2874 3.0228 0.0011 43 1 4.7504 5.0724 -0.7285 44 1 3.7925 5.3510 1.9980 45 1 1.5582 6.3475 0.5084 46 1 3.3264 7.7081 -0.4609 47 1 1.3129 4.5124 -0.0020 48 1 0.2174 2.3120 -0.0006 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12301704_6672420.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:21:53 Heat of formation + Delta-G solvation = -226.788952 kcal Electronic energy + Delta-G solvation = -37867.131229 eV Core-core repulsion = 32247.388280 eV Total energy + Delta-G solvation = -5619.742948 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 400.138 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -51.12933 -48.61974 -48.60489 -43.77185 -41.28709 -40.57204 -39.32784 -39.12721 -37.12191 -35.75617 -33.66947 -32.22380 -31.98068 -31.71850 -30.72752 -28.55246 -26.81371 -26.24909 -24.88948 -24.02980 -23.99060 -22.82350 -21.92965 -21.75390 -21.28296 -19.85190 -19.31267 -19.26323 -19.01439 -18.64158 -18.53331 -17.95433 -17.78164 -17.43009 -17.02470 -16.61394 -16.25643 -16.19193 -15.89942 -15.85828 -15.65076 -15.55681 -15.14179 -15.09238 -14.97590 -14.78026 -14.77418 -14.76844 -14.59089 -14.56444 -14.49762 -14.22113 -13.77244 -13.66095 -13.47929 -13.40382 -13.32825 -13.26116 -12.55422 -12.47672 -12.26982 -12.25688 -12.17036 -12.12957 -11.69408 -11.66672 -11.61808 -11.41903 -11.03276 -10.61476 -10.35062 -9.84386 -9.02050 -4.89311 -0.68766 0.08584 0.59934 1.15290 1.30068 1.59110 1.73275 1.86722 1.89518 1.97972 2.13114 2.38118 2.78909 2.94281 3.02857 3.16164 3.38431 3.53729 3.54744 3.62018 3.65005 3.80588 3.85359 3.85850 3.95543 4.04736 4.06067 4.16178 4.18322 4.23640 4.33047 4.35909 4.42474 4.43651 4.48360 4.51713 4.67336 4.77088 4.81130 4.83525 4.85841 4.95112 5.01599 5.02313 5.03879 5.10621 5.14370 5.20791 5.28354 5.36826 5.57108 6.17885 6.28352 6.49543 6.80691 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.332 6.332 3 C 0.138 3.862 4 C 0.022 3.978 5 O -0.179 6.179 6 C -0.032 4.032 7 C 0.603 3.397 8 O -0.544 6.544 9 N -0.698 5.698 10 C 0.139 3.861 11 H 0.080 0.920 12 C -0.121 4.121 13 C -0.113 4.113 14 C -0.126 4.126 15 H 0.137 0.863 16 C 0.449 3.551 17 F -0.191 7.191 18 F -0.192 7.192 19 F -0.189 7.189 20 C -0.114 4.114 21 C -0.114 4.114 22 C -0.114 4.114 23 C -0.096 4.096 24 C -0.100 4.100 25 C -0.089 4.089 26 O -0.548 6.548 27 Si 0.782 3.218 28 C -0.089 4.089 29 C -0.166 4.166 30 H 0.077 0.923 31 H 0.116 0.884 32 H 0.073 0.927 33 H 0.418 0.582 34 H 0.059 0.941 35 H 0.086 0.914 36 H 0.083 0.917 37 H 0.072 0.928 38 H 0.075 0.925 39 H 0.094 0.906 40 H 0.088 0.912 41 H 0.095 0.905 42 H 0.170 0.830 43 H 0.115 0.885 44 H 0.386 0.614 45 H -0.262 1.262 46 H -0.306 1.306 47 H 0.165 0.835 48 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.671 -1.263 -2.008 10.931 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.246 6.246 3 C 0.092 3.908 4 C -0.026 4.026 5 O -0.081 6.081 6 C -0.082 4.082 7 C 0.389 3.611 8 O -0.423 6.423 9 N -0.348 5.348 10 C 0.036 3.964 11 H 0.098 0.902 12 C -0.159 4.159 13 C -0.152 4.152 14 C -0.145 4.145 15 H 0.155 0.845 16 C 0.395 3.605 17 F -0.173 7.173 18 F -0.173 7.173 19 F -0.170 7.170 20 C -0.152 4.152 21 C -0.151 4.151 22 C -0.135 4.135 23 C -0.097 4.097 24 C -0.101 4.101 25 C -0.197 4.197 26 O -0.356 6.356 27 Si 0.685 3.315 28 C -0.106 4.106 29 C -0.184 4.184 30 H 0.095 0.905 31 H 0.134 0.866 32 H 0.091 0.909 33 H 0.256 0.744 34 H 0.078 0.922 35 H 0.105 0.895 36 H 0.102 0.898 37 H 0.090 0.910 38 H 0.094 0.906 39 H 0.113 0.887 40 H 0.107 0.893 41 H 0.113 0.887 42 H 0.188 0.812 43 H 0.132 0.868 44 H 0.236 0.764 45 H -0.188 1.188 46 H -0.234 1.234 47 H 0.182 0.818 48 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges -9.715 -0.654 -2.096 9.960 hybrid contribution 0.461 -0.387 1.331 1.461 sum -9.254 -1.040 -0.765 9.343 Atomic orbital electron populations 1.23485 0.75327 1.06032 1.03138 1.86142 1.24284 1.25775 1.88416 1.17969 0.86098 0.86840 0.99867 1.19192 0.88231 0.87094 1.08117 1.84010 1.12648 1.34964 1.76476 1.21954 0.84066 0.92688 1.09536 1.16664 0.84915 0.82892 0.76672 1.90902 1.31364 1.68278 1.51732 1.45896 1.11262 1.04769 1.72908 1.21237 0.84499 0.93489 0.97214 0.90213 1.21820 0.96845 1.00808 0.96461 1.21527 0.98422 0.92872 1.02337 1.22603 0.91637 0.97985 1.02270 0.84501 1.20988 0.88749 0.77879 0.72892 1.93165 1.69245 1.78221 1.76623 1.93171 1.90753 1.96028 1.37389 1.93179 1.95446 1.42781 1.85628 1.21562 0.97731 1.02879 0.93028 1.21702 0.97721 0.92714 1.02994 1.22848 0.95374 0.94505 1.00760 1.19573 0.92327 0.92821 1.04988 1.19545 0.93475 0.93866 1.03229 1.25380 1.07699 0.98679 0.87940 1.86609 1.38958 1.92778 1.17272 0.93891 0.75422 0.73453 0.88725 1.20884 0.92917 0.98843 0.97979 1.21371 1.01809 0.89599 1.05658 0.90481 0.86604 0.90884 0.74444 0.92240 0.89502 0.89823 0.90960 0.90641 0.88717 0.89316 0.88660 0.81229 0.86754 0.76443 1.18787 1.23400 0.81803 0.80324 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.42 10.50 -93.13 -0.98 -1.40 16 3 C 0.14 0.27 6.70 22.57 0.15 0.43 16 4 C 0.02 0.13 7.35 23.14 0.17 0.30 16 5 O -0.18 -1.23 10.28 -13.46 -0.14 -1.36 16 6 C -0.03 -0.23 7.07 24.00 0.17 -0.06 16 7 C 0.60 4.08 7.76 86.54 0.67 4.75 16 8 O -0.54 -7.13 16.49 -4.19 -0.07 -7.20 16 9 N -0.70 0.15 5.07 -446.21 -2.26 -2.11 16 10 C 0.14 -0.29 2.45 44.99 0.11 -0.18 16 11 H 0.08 0.16 7.58 -2.39 -0.02 0.14 16 12 C -0.12 0.27 5.50 30.60 0.17 0.44 16 13 C -0.11 0.30 4.96 30.59 0.15 0.46 16 14 C -0.13 0.55 2.17 -10.79 -0.02 0.53 16 15 H 0.14 -1.11 8.14 -2.39 -0.02 -1.13 16 16 C 0.45 0.52 2.69 71.98 0.19 0.72 16 17 F -0.19 -0.79 16.28 44.97 0.73 -0.06 16 18 F -0.19 -0.75 16.80 44.97 0.76 0.01 16 19 F -0.19 -0.53 16.80 44.97 0.76 0.23 16 20 C -0.11 0.67 4.96 30.58 0.15 0.82 16 21 C -0.11 0.83 5.39 30.58 0.16 1.00 16 22 C -0.11 -0.85 10.68 23.79 0.25 -0.59 16 23 C -0.10 -0.53 6.16 -20.24 -0.12 -0.65 16 24 C -0.10 -0.07 5.26 -19.87 -0.10 -0.17 16 25 C -0.09 0.01 2.70 71.24 0.19 0.21 16 26 O -0.55 -1.82 12.88 -148.98 -1.92 -3.74 16 27 Si 0.78 -3.21 30.25 68.60 2.08 -1.14 16 28 C -0.09 0.34 8.62 22.02 0.19 0.53 16 29 C -0.17 0.65 9.03 22.40 0.20 0.85 16 30 H 0.08 -0.85 7.66 -2.39 -0.02 -0.87 16 31 H 0.12 -1.19 8.14 -2.39 -0.02 -1.21 16 32 H 0.07 -0.77 7.66 -2.39 -0.02 -0.79 16 33 H 0.42 -1.71 8.32 -92.71 -0.77 -2.49 16 34 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 35 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 36 H 0.08 -0.22 7.80 -2.39 -0.02 -0.24 16 37 H 0.07 -0.04 7.80 -2.39 -0.02 -0.06 16 38 H 0.07 -0.30 7.80 -2.39 -0.02 -0.32 16 39 H 0.09 -0.67 7.80 -2.39 -0.02 -0.69 16 40 H 0.09 -0.69 8.14 -2.39 -0.02 -0.71 16 41 H 0.09 -0.99 8.14 -2.39 -0.02 -1.01 16 42 H 0.17 1.21 8.06 -2.91 -0.02 1.19 16 43 H 0.11 0.00 7.96 -2.39 -0.02 -0.02 16 44 H 0.39 -1.21 8.70 -74.05 -0.64 -1.85 16 45 H -0.26 0.88 6.69 99.48 0.67 1.54 16 46 H -0.31 -1.37 7.11 99.48 0.71 -0.67 16 47 H 0.16 -1.46 4.81 -2.91 -0.01 -1.48 16 48 H 0.18 -1.94 6.26 -2.91 -0.02 -1.95 16 Total: 0.00 -21.73 405.46 2.39 -19.34 By element: Atomic # 1 Polarization: -12.58 SS G_CDS: -0.36 Total: -12.94 kcal Atomic # 6 Polarization: 6.57 SS G_CDS: 3.80 Total: 10.37 kcal Atomic # 7 Polarization: 0.15 SS G_CDS: -2.26 Total: -2.11 kcal Atomic # 8 Polarization: -10.60 SS G_CDS: -3.10 Total: -13.70 kcal Atomic # 9 Polarization: -2.07 SS G_CDS: 2.24 Total: 0.18 kcal Atomic # 14 Polarization: -3.21 SS G_CDS: 2.08 Total: -1.14 kcal Total: -21.73 2.39 -19.34 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12301704_6672420.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -207.444 kcal (2) G-P(sol) polarization free energy of solvation -21.731 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -229.176 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.387 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.344 kcal (6) G-S(sol) free energy of system = (1) + (5) -226.789 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds