Wall clock time and date at job start Tue Mar 9 2021 14:23:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86302 * 109.47041 * 2 1 4 4 C 1.50704 * 109.47379 * 239.99934 * 2 1 3 5 5 C 1.37811 * 119.94101 * 254.72973 * 4 2 1 6 6 C 1.39676 * 119.87751 * 180.27710 * 5 4 2 7 7 C 1.47723 * 120.11675 * 179.97438 * 6 5 4 8 8 O 1.21570 * 119.99737 * 0.02562 * 7 6 5 9 9 N 1.34778 * 119.99909 * 180.02562 * 7 6 5 10 10 C 1.46495 * 119.99626 * 180.02562 * 9 7 6 11 11 C 1.53004 * 109.46718 * 180.02562 * 10 9 7 12 12 H 1.08994 * 112.85193 * 316.19181 * 11 10 9 13 13 C 1.53775 * 113.61654 * 87.50811 * 11 10 9 14 14 C 1.53777 * 87.08579 * 139.98028 * 13 11 10 15 15 H 1.08992 * 113.61823 * 89.11221 * 14 13 11 16 16 O 1.42900 * 113.61235 * 220.02201 * 14 13 11 17 17 C 1.53784 * 87.07872 * 334.56476 * 14 13 11 18 18 C 1.39628 * 119.76359 * 0.02562 * 6 5 4 19 19 C 1.37855 * 119.88414 * 359.97438 * 18 6 5 20 20 C 1.38634 * 120.11575 * 359.97438 * 19 18 6 21 21 F 1.35097 * 119.88094 * 180.02562 * 20 19 18 22 22 H 0.96702 * 113.99858 * 60.00264 * 1 2 3 23 23 H 1.09001 * 109.47362 * 120.00034 * 2 1 3 24 24 H 1.48499 * 109.99745 * 298.68044 * 3 2 1 25 25 H 1.48493 * 110.00023 * 59.99896 * 3 2 1 26 26 H 1.07993 * 120.06381 * 0.24668 * 5 4 2 27 27 H 0.96998 * 119.99941 * 0.02562 * 9 7 6 28 28 H 1.08994 * 109.47640 * 300.00081 * 10 9 7 29 29 H 1.09000 * 109.47395 * 60.00558 * 10 9 7 30 30 H 1.09001 * 113.61228 * 254.53261 * 13 11 10 31 31 H 1.08997 * 113.61889 * 25.42614 * 13 11 10 32 32 H 0.96704 * 113.99459 * 277.48808 * 16 14 13 33 33 H 1.08999 * 113.61721 * 270.88681 * 17 14 13 34 34 H 1.09001 * 113.61123 * 139.98401 * 17 14 13 35 35 H 1.08004 * 120.05709 * 180.02562 * 18 6 5 36 36 H 1.07995 * 119.94439 * 180.02562 * 19 18 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.4572 -1.9799 -1.1252 6 6 2.9278 -2.6349 -2.2656 7 6 3.4930 -3.9955 -2.1588 8 8 3.5487 -4.5473 -1.0770 9 7 3.9469 -4.6251 -3.2607 10 6 4.5069 -5.9746 -3.1548 11 6 4.9450 -6.4550 -4.5398 12 1 4.2140 -6.2306 -5.3165 13 6 6.3816 -6.0479 -4.9072 14 6 6.5349 -7.4456 -5.5297 15 1 6.2396 -7.4916 -6.5779 16 8 7.8084 -8.0453 -5.2837 17 6 5.4368 -7.9120 -4.5594 18 6 2.8631 -1.9985 -3.5068 19 6 2.3352 -0.7285 -3.6008 20 6 1.8685 -0.0834 -2.4659 21 9 1.3516 1.1609 -2.5635 22 1 -0.3933 0.4417 -0.7651 23 1 1.7924 -0.5138 0.8900 24 1 1.5878 2.4585 -1.2242 25 1 1.5614 2.4679 1.2084 26 1 2.5058 -2.4673 -0.1628 27 1 3.9027 -4.1846 -4.1238 28 1 5.3680 -5.9594 -2.4868 29 1 3.7507 -6.6517 -2.7575 30 1 6.4334 -5.2378 -5.6346 31 1 7.0235 -5.8826 -4.0418 32 1 8.5032 -7.7559 -5.8909 33 1 5.8202 -8.2563 -3.5989 34 1 4.7257 -8.6070 -5.0061 35 1 3.2252 -2.5007 -4.3917 36 1 2.2842 -0.2355 -4.5603 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12309068_12496548.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:23:03 Heat of formation + Delta-G solvation = -97.239164 kcal Electronic energy + Delta-G solvation = -21516.024531 eV Core-core repulsion = 17882.554564 eV Total energy + Delta-G solvation = -3633.469967 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.110 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -50.49105 -41.47069 -40.53152 -39.52183 -37.77930 -36.66414 -35.16465 -33.02599 -32.12290 -29.00029 -27.01928 -26.88117 -24.98572 -23.61184 -23.26084 -21.62319 -20.61576 -19.38380 -18.91767 -18.59015 -17.95632 -17.83635 -17.20189 -16.94513 -16.62114 -16.24883 -16.20101 -15.62048 -15.55996 -15.12682 -15.04529 -14.85303 -14.59861 -14.09414 -13.80131 -13.66787 -13.57407 -13.30986 -12.97918 -12.74787 -12.60494 -12.37102 -12.01524 -11.46943 -11.28027 -11.13973 -10.89715 -10.80268 -10.26241 -10.18498 -9.87899 -4.95509 -0.57686 -0.08747 1.20439 1.57224 1.63030 1.94835 2.01986 2.52042 2.88481 3.09843 3.18244 3.30734 3.39341 3.40197 3.45715 3.55238 3.63339 3.78843 3.79894 4.00866 4.04919 4.18251 4.26768 4.50228 4.54944 4.60265 4.66738 4.67358 4.73802 4.75672 4.84579 4.90957 4.98518 5.00913 5.18697 5.32269 5.49094 6.27536 6.33419 6.61300 7.08820 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.523 6.523 2 C -0.074 4.074 3 Si 0.675 3.325 4 C -0.151 4.151 5 C -0.010 4.010 6 C -0.143 4.143 7 C 0.560 3.440 8 O -0.529 6.529 9 N -0.725 5.725 10 C 0.131 3.869 11 C -0.125 4.125 12 H 0.100 0.900 13 C -0.165 4.165 14 C 0.075 3.925 15 H 0.083 0.917 16 O -0.559 6.559 17 C -0.120 4.120 18 C -0.055 4.055 19 C -0.153 4.153 20 C 0.119 3.881 21 F -0.123 7.123 22 H 0.375 0.625 23 H 0.125 0.875 24 H -0.231 1.231 25 H -0.259 1.259 26 H 0.151 0.849 27 H 0.400 0.600 28 H 0.075 0.925 29 H 0.074 0.926 30 H 0.071 0.929 31 H 0.093 0.907 32 H 0.380 0.620 33 H 0.096 0.904 34 H 0.079 0.921 35 H 0.138 0.862 36 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.889 0.707 -6.301 6.968 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.183 4.183 3 Si 0.574 3.426 4 C -0.152 4.152 5 C -0.028 4.028 6 C -0.146 4.146 7 C 0.347 3.653 8 O -0.406 6.406 9 N -0.377 5.377 10 C 0.008 3.992 11 C -0.144 4.144 12 H 0.118 0.882 13 C -0.203 4.203 14 C 0.016 3.984 15 H 0.101 0.899 16 O -0.365 6.365 17 C -0.158 4.158 18 C -0.074 4.074 19 C -0.171 4.171 20 C 0.099 3.901 21 F -0.101 7.101 22 H 0.223 0.777 23 H 0.143 0.857 24 H -0.155 1.155 25 H -0.184 1.184 26 H 0.168 0.832 27 H 0.235 0.765 28 H 0.093 0.907 29 H 0.092 0.908 30 H 0.090 0.910 31 H 0.112 0.888 32 H 0.227 0.773 33 H 0.114 0.886 34 H 0.097 0.903 35 H 0.156 0.844 36 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 2.457 0.563 -4.494 5.152 hybrid contribution -0.918 0.499 -1.570 1.886 sum 1.539 1.062 -6.064 6.346 Atomic orbital electron populations 1.86660 1.17102 1.79907 1.49269 1.25001 0.84292 1.11465 0.97554 0.95442 0.91448 0.74649 0.81017 1.20276 1.04072 0.96427 0.94464 1.21049 0.91324 0.91312 0.99165 1.20007 1.04785 0.95370 0.94466 1.18110 0.77810 0.85223 0.84178 1.90830 1.55670 1.67003 1.27131 1.45881 1.63522 1.17962 1.10344 1.21388 0.99032 0.82338 0.96430 1.22587 0.97116 0.97540 0.97149 0.88168 1.23812 0.96311 0.98090 1.02104 1.23311 0.84463 0.92576 0.98042 0.89911 1.86547 1.19656 1.70165 1.60116 1.23050 0.96400 0.95397 1.00909 1.21173 0.95679 0.93784 0.96791 1.21093 1.01772 0.96003 0.98253 1.17907 0.97218 0.80552 0.94412 1.91575 1.84254 1.37897 1.96411 0.77706 0.85742 1.15450 1.18425 0.83162 0.76465 0.90715 0.90775 0.91043 0.88829 0.77259 0.88591 0.90270 0.84447 0.83558 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -1.00 12.88 -35.23 -0.45 -1.45 16 2 C -0.07 -0.01 2.80 36.01 0.10 0.09 16 3 Si 0.68 -0.16 30.82 -169.99 -5.24 -5.40 16 4 C -0.15 0.00 4.78 -104.61 -0.50 -0.50 16 5 C -0.01 0.00 9.21 -39.20 -0.36 -0.37 16 6 C -0.14 0.02 5.87 -104.97 -0.62 -0.59 16 7 C 0.56 0.78 7.77 -12.38 -0.10 0.69 16 8 O -0.53 -2.87 16.34 5.30 0.09 -2.79 16 9 N -0.72 1.14 5.51 -61.29 -0.34 0.80 16 10 C 0.13 -0.16 5.51 -4.04 -0.02 -0.18 16 11 C -0.13 0.39 3.75 -89.81 -0.34 0.05 16 12 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 13 C -0.17 0.46 7.46 -25.92 -0.19 0.27 16 14 C 0.08 -0.14 5.21 -25.92 -0.14 -0.28 16 15 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 16 O -0.56 0.08 13.67 -35.23 -0.48 -0.41 16 17 C -0.12 0.21 7.47 -25.91 -0.19 0.02 16 18 C -0.06 0.14 9.54 -39.20 -0.37 -0.23 16 19 C -0.15 0.31 10.01 -39.58 -0.40 -0.08 16 20 C 0.12 -0.04 6.62 -39.27 -0.26 -0.30 16 21 F -0.12 -0.09 12.57 2.25 0.03 -0.06 16 22 H 0.38 -0.23 8.39 45.56 0.38 0.15 16 23 H 0.12 -0.10 7.76 -51.93 -0.40 -0.50 16 24 H -0.23 -0.36 5.28 56.52 0.30 -0.06 16 25 H -0.26 -0.79 7.11 56.52 0.40 -0.39 16 26 H 0.15 0.10 7.58 -52.49 -0.40 -0.30 16 27 H 0.40 -1.78 6.50 -40.82 -0.27 -2.05 16 28 H 0.07 0.00 7.84 -51.93 -0.41 -0.40 16 29 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 30 H 0.07 -0.27 8.14 -51.93 -0.42 -0.70 16 31 H 0.09 -0.14 7.89 -51.93 -0.41 -0.55 16 32 H 0.38 -1.56 9.12 45.56 0.42 -1.15 16 33 H 0.10 -0.06 8.10 -51.93 -0.42 -0.48 16 34 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 35 H 0.14 -0.79 6.40 -52.48 -0.34 -1.12 16 36 H 0.15 -0.58 8.06 -52.49 -0.42 -1.00 16 LS Contribution 308.55 15.07 4.65 4.65 Total: 0.00 -8.41 308.55 -8.81 -17.22 By element: Atomic # 1 Polarization: -7.47 SS G_CDS: -3.68 Total: -11.15 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -3.38 Total: -1.43 kcal Atomic # 7 Polarization: 1.14 SS G_CDS: -0.34 Total: 0.80 kcal Atomic # 8 Polarization: -3.80 SS G_CDS: -0.85 Total: -4.64 kcal Atomic # 9 Polarization: -0.09 SS G_CDS: 0.03 Total: -0.06 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: -5.24 Total: -5.40 kcal Total LS contribution 4.65 Total: 4.65 kcal Total: -8.41 -8.81 -17.22 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_12496548.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.015 kcal (2) G-P(sol) polarization free energy of solvation -8.414 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.429 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.810 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.224 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.239 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds