Wall clock time and date at job start Tue Mar 9 2021 14:24:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86301 * 109.46828 * 2 1 4 4 C 1.50693 * 109.47075 * 120.00027 * 2 1 3 5 5 C 1.38719 * 120.02704 * 75.30072 * 4 2 1 6 6 O 1.35898 * 120.05545 * 0.02562 * 5 4 2 7 7 C 1.42899 * 116.99584 * 180.23053 * 6 5 4 8 8 C 1.50702 * 109.46691 * 180.02562 * 7 6 5 9 9 O 1.21283 * 120.00281 * 0.02562 * 8 7 6 10 10 N 1.34779 * 119.99751 * 180.02562 * 8 7 6 11 11 C 1.46505 * 120.00037 * 179.97438 * 10 8 7 12 12 C 1.52997 * 109.47240 * 179.97438 * 11 10 8 13 13 H 1.08999 * 112.85485 * 316.19801 * 12 11 10 14 14 C 1.53786 * 113.61101 * 87.50555 * 12 11 10 15 15 C 1.53780 * 87.08017 * 139.98252 * 14 12 11 16 16 H 1.08995 * 113.69244 * 89.12585 * 15 14 12 17 17 O 1.42905 * 113.61346 * 220.02040 * 15 14 12 18 18 C 1.53775 * 87.08214 * 334.56356 * 15 14 12 19 19 C 1.38752 * 119.88551 * 180.25322 * 5 4 2 20 20 C 1.38128 * 119.94499 * 359.74245 * 19 5 4 21 21 C 1.38281 * 120.05740 * 359.97438 * 20 19 5 22 22 C 1.38163 * 120.02857 * 254.99514 * 4 2 1 23 23 H 0.96699 * 113.99498 * 299.99823 * 1 2 3 24 24 H 1.09004 * 109.46982 * 240.00516 * 2 1 3 25 25 H 1.48502 * 110.00392 * 300.00034 * 3 2 1 26 26 H 1.48496 * 109.99928 * 61.32389 * 3 2 1 27 27 H 1.08991 * 109.47595 * 300.00228 * 7 6 5 28 28 H 1.09001 * 109.47308 * 60.00938 * 7 6 5 29 29 H 0.97000 * 120.00288 * 359.97438 * 10 8 7 30 30 H 1.08996 * 109.47275 * 299.99867 * 11 10 8 31 31 H 1.09005 * 109.47061 * 59.99348 * 11 10 8 32 32 H 1.09002 * 113.61550 * 254.52871 * 14 12 11 33 33 H 1.08998 * 113.61558 * 25.43196 * 14 12 11 34 34 H 0.96695 * 113.99869 * 277.49942 * 17 15 14 35 35 H 1.08999 * 113.61874 * 270.88749 * 18 15 14 36 36 H 1.09001 * 113.61664 * 139.98054 * 18 15 14 37 37 H 1.07998 * 120.02555 * 179.72481 * 19 5 4 38 38 H 1.08005 * 119.97015 * 180.02562 * 20 19 5 39 39 H 1.07998 * 119.94637 * 180.02562 * 21 20 19 40 40 H 1.08002 * 119.97507 * 0.02562 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.8754 -2.0945 1.3043 6 8 1.3682 -2.8115 0.2673 7 6 1.3371 -4.2325 0.4150 8 6 0.7473 -4.8535 -0.8250 9 8 0.3893 -4.1487 -1.7448 10 7 0.6176 -6.1922 -0.9119 11 6 0.0438 -6.7960 -2.1171 12 6 0.0105 -8.3174 -1.9591 13 1 0.9316 -8.7194 -1.5370 14 6 -1.2629 -8.8376 -1.2714 15 6 -1.2417 -9.9954 -2.2833 16 1 -0.6643 -10.8577 -1.9502 17 8 -2.5361 -10.3503 -2.7742 18 6 -0.4632 -9.0576 -3.2210 19 6 2.3339 -2.7452 2.4408 20 6 2.8496 -2.0142 3.4932 21 6 2.9096 -0.6349 3.4146 22 6 2.4538 0.0159 2.2832 23 1 -0.3932 0.4417 0.7651 24 1 1.7924 -0.5138 -0.8901 25 1 1.5615 2.4680 -1.2085 26 1 1.5879 2.4585 1.2243 27 1 2.3510 -4.6050 0.5604 28 1 0.7262 -4.4947 1.2788 29 1 0.9042 -6.7560 -0.1764 30 1 -0.9701 -6.4233 -2.2627 31 1 0.6547 -6.5339 -2.9809 32 1 -1.1039 -9.1554 -0.2409 33 1 -2.1213 -8.1753 -1.3835 34 1 -3.0306 -10.9399 -2.1888 35 1 -1.1030 -8.4555 -3.8661 36 1 0.3413 -9.5530 -3.7645 37 1 2.2873 -3.8224 2.5025 38 1 3.2069 -2.5203 4.3778 39 1 3.3136 -0.0651 4.2384 40 1 2.5018 1.0932 2.2244 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12309068_2989392.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:24:09 Heat of formation + Delta-G solvation = -92.591497 kcal Electronic energy + Delta-G solvation = -23052.713382 eV Core-core repulsion = 19414.679118 eV Total energy + Delta-G solvation = -3638.034264 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.60091 -40.88980 -40.06604 -38.46358 -37.46192 -36.61132 -35.06291 -32.76242 -31.43849 -30.25371 -28.00390 -26.86759 -26.61139 -23.91508 -23.15443 -22.60069 -21.72626 -20.58581 -19.49336 -18.85725 -18.14093 -17.87471 -17.51331 -17.10681 -16.90482 -16.55459 -16.40850 -15.99056 -15.66402 -15.65017 -15.19160 -15.00292 -14.83825 -14.57466 -14.11831 -13.75460 -13.59854 -13.56437 -13.33795 -13.03933 -12.75233 -12.60699 -12.48398 -12.17834 -12.00108 -11.82588 -11.55093 -11.46137 -10.95434 -10.78212 -10.38970 -10.17717 -10.01125 -9.21815 -4.88329 0.20050 0.39788 1.38694 1.45931 1.52723 1.64093 2.05192 2.55061 2.66721 3.10944 3.31180 3.40522 3.52303 3.56223 3.64536 3.73072 3.78606 3.79973 3.86000 3.89962 4.01265 4.06245 4.19209 4.25515 4.33035 4.50898 4.55499 4.60890 4.68148 4.71081 4.75344 4.85663 4.97730 4.99076 5.19227 5.24724 5.30755 5.33189 5.47024 5.67855 6.23193 6.38524 6.60934 6.61982 7.11760 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.520 6.520 2 C -0.065 4.065 3 Si 0.689 3.311 4 C -0.146 4.146 5 C 0.152 3.848 6 O -0.278 6.278 7 C 0.040 3.960 8 C 0.514 3.486 9 O -0.508 6.508 10 N -0.727 5.727 11 C 0.133 3.867 12 C -0.124 4.124 13 H 0.101 0.899 14 C -0.166 4.166 15 C 0.075 3.925 16 H 0.083 0.917 17 O -0.559 6.559 18 C -0.120 4.120 19 C -0.212 4.212 20 C -0.072 4.072 21 C -0.151 4.151 22 C -0.083 4.083 23 H 0.370 0.630 24 H 0.118 0.882 25 H -0.257 1.257 26 H -0.260 1.260 27 H 0.094 0.906 28 H 0.093 0.907 29 H 0.402 0.598 30 H 0.073 0.927 31 H 0.074 0.926 32 H 0.071 0.929 33 H 0.093 0.907 34 H 0.380 0.620 35 H 0.095 0.905 36 H 0.079 0.921 37 H 0.129 0.871 38 H 0.128 0.872 39 H 0.129 0.871 40 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.165 -4.845 5.773 8.612 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.325 6.325 2 C -0.175 4.175 3 Si 0.591 3.409 4 C -0.147 4.147 5 C 0.106 3.894 6 O -0.189 6.189 7 C -0.039 4.039 8 C 0.298 3.702 9 O -0.381 6.381 10 N -0.382 5.382 11 C 0.010 3.990 12 C -0.143 4.143 13 H 0.119 0.881 14 C -0.203 4.203 15 C 0.016 3.984 16 H 0.101 0.899 17 O -0.365 6.365 18 C -0.158 4.158 19 C -0.231 4.231 20 C -0.091 4.091 21 C -0.169 4.169 22 C -0.101 4.101 23 H 0.216 0.784 24 H 0.136 0.864 25 H -0.182 1.182 26 H -0.186 1.186 27 H 0.112 0.888 28 H 0.111 0.889 29 H 0.236 0.764 30 H 0.092 0.908 31 H 0.092 0.908 32 H 0.090 0.910 33 H 0.111 0.889 34 H 0.227 0.773 35 H 0.114 0.886 36 H 0.098 0.902 37 H 0.147 0.853 38 H 0.146 0.854 39 H 0.147 0.853 40 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 3.875 -3.334 3.821 6.382 hybrid contribution -0.966 -1.170 1.728 2.300 sum 2.909 -4.504 5.549 7.716 Atomic orbital electron populations 1.86710 1.17570 1.79616 1.48643 1.24908 0.84012 1.10348 0.98257 0.95121 0.91422 0.74449 0.79922 1.19643 1.05582 0.90982 0.98458 1.18801 0.93094 0.90834 0.86671 1.86239 1.77628 1.16819 1.38249 1.22463 1.02508 0.81416 0.97532 1.20023 0.79345 0.82451 0.88396 1.90812 1.47184 1.61040 1.39079 1.45796 1.65379 1.06238 1.20791 1.21370 0.99483 0.90995 0.87122 1.22583 0.98865 0.94018 0.98817 0.88095 1.23814 0.98184 0.99178 0.99168 1.23312 0.84889 0.95055 0.95121 0.89888 1.86547 1.29085 1.70452 1.50411 1.23051 0.99290 0.97182 0.96255 1.21291 1.06584 1.00425 0.94800 1.21024 0.96274 0.94098 0.97664 1.21063 1.02790 0.94572 0.98524 1.21049 0.96545 0.99947 0.92552 0.78366 0.86415 1.18190 1.18564 0.88827 0.88928 0.76431 0.90830 0.90809 0.91042 0.88875 0.77266 0.88604 0.90237 0.85291 0.85375 0.85323 0.84762 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -2.26 12.88 -35.23 -0.45 -2.72 16 2 C -0.07 -0.17 2.38 36.00 0.09 -0.08 16 3 Si 0.69 0.32 30.25 -169.99 -5.14 -4.82 16 4 C -0.15 -0.28 5.27 -104.48 -0.55 -0.84 16 5 C 0.15 0.34 6.66 -39.21 -0.26 0.08 16 6 O -0.28 -1.01 9.00 -39.33 -0.35 -1.36 16 7 C 0.04 -0.01 5.22 36.01 0.19 0.17 16 8 C 0.51 1.06 7.91 -10.98 -0.09 0.97 16 9 O -0.51 -3.80 16.50 -14.36 -0.24 -4.04 16 10 N -0.73 1.01 5.56 -60.29 -0.33 0.68 16 11 C 0.13 -0.09 5.51 -4.04 -0.02 -0.11 16 12 C -0.12 0.34 3.76 -89.80 -0.34 0.00 16 13 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 14 C -0.17 0.39 7.46 -25.92 -0.19 0.19 16 15 C 0.08 -0.12 5.21 -25.92 -0.14 -0.25 16 16 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 17 O -0.56 -0.15 13.67 -35.23 -0.48 -0.63 16 18 C -0.12 0.17 7.47 -25.92 -0.19 -0.03 16 19 C -0.21 0.01 9.04 -39.43 -0.36 -0.34 16 20 C -0.07 0.05 10.04 -39.61 -0.40 -0.35 16 21 C -0.15 0.07 10.04 -39.56 -0.40 -0.33 16 22 C -0.08 -0.02 8.66 -39.60 -0.34 -0.37 16 23 H 0.37 0.30 8.70 45.56 0.40 0.70 16 24 H 0.12 0.41 7.82 -51.93 -0.41 0.01 16 25 H -0.26 -1.00 7.11 56.52 0.40 -0.60 16 26 H -0.26 -0.38 6.68 56.52 0.38 0.00 16 27 H 0.09 -0.30 7.66 -51.93 -0.40 -0.70 16 28 H 0.09 -0.25 7.66 -51.93 -0.40 -0.65 16 29 H 0.40 -1.90 8.47 -40.82 -0.35 -2.25 16 30 H 0.07 0.07 7.84 -51.93 -0.41 -0.34 16 31 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 32 H 0.07 -0.24 8.14 -51.93 -0.42 -0.67 16 33 H 0.09 -0.08 7.90 -51.93 -0.41 -0.49 16 34 H 0.38 -1.42 9.12 45.56 0.42 -1.01 16 35 H 0.10 -0.01 8.10 -51.93 -0.42 -0.43 16 36 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 37 H 0.13 -0.34 6.30 -52.49 -0.33 -0.67 16 38 H 0.13 -0.36 8.06 -52.48 -0.42 -0.79 16 39 H 0.13 -0.31 8.06 -52.49 -0.42 -0.73 16 40 H 0.13 -0.15 4.86 -52.49 -0.26 -0.40 16 LS Contribution 337.53 15.07 5.09 5.09 Total: 0.00 -10.92 337.53 -9.66 -20.58 By element: Atomic # 1 Polarization: -6.77 SS G_CDS: -4.74 Total: -11.51 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -3.00 Total: -1.27 kcal Atomic # 7 Polarization: 1.01 SS G_CDS: -0.33 Total: 0.68 kcal Atomic # 8 Polarization: -7.22 SS G_CDS: -1.53 Total: -8.75 kcal Atomic # 14 Polarization: 0.32 SS G_CDS: -5.14 Total: -4.82 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -10.92 -9.66 -20.58 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_2989392.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.011 kcal (2) G-P(sol) polarization free energy of solvation -10.923 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.934 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.658 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.581 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.591 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds