Wall clock time and date at job start Tue Mar 9 2021 14:24:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86296 * 109.46995 * 2 1 4 4 C 1.50705 * 109.47151 * 119.99792 * 2 1 3 5 5 C 1.38263 * 119.94288 * 65.00696 * 4 2 1 6 6 C 1.38140 * 120.05501 * 180.02562 * 5 4 2 7 7 C 1.38729 * 119.94655 * 359.97438 * 6 5 4 8 8 O 1.35904 * 120.06055 * 180.02562 * 7 6 5 9 9 C 1.42897 * 117.00158 * 180.02562 * 8 7 6 10 10 C 1.50698 * 109.47008 * 180.02562 * 9 8 7 11 11 O 1.21281 * 120.00164 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99720 * 179.97438 * 10 9 8 13 13 C 1.46508 * 120.00013 * 180.02562 * 12 10 9 14 14 C 1.52991 * 109.47429 * 180.02562 * 13 12 10 15 15 H 1.09003 * 112.84801 * 316.19512 * 14 13 12 16 16 C 1.53781 * 113.61611 * 87.50116 * 14 13 12 17 17 C 1.54049 * 87.08031 * 139.97702 * 16 14 13 18 18 H 1.09000 * 113.61076 * 89.06984 * 17 16 14 19 19 O 1.42891 * 113.69771 * 220.05337 * 17 16 14 20 20 C 1.53781 * 113.61529 * 184.99923 * 14 13 12 21 21 C 1.38738 * 119.88680 * 0.27548 * 7 6 5 22 22 C 1.38148 * 119.94208 * 359.47626 * 21 7 6 23 23 H 0.96697 * 113.99809 * 60.00493 * 1 2 3 24 24 H 1.09001 * 109.47360 * 240.00118 * 2 1 3 25 25 H 1.48506 * 110.00066 * 298.68127 * 3 2 1 26 26 H 1.48498 * 110.00080 * 59.99899 * 3 2 1 27 27 H 1.08003 * 119.97263 * 359.96820 * 5 4 2 28 28 H 1.08006 * 120.02994 * 179.97438 * 6 5 4 29 29 H 1.08993 * 109.47232 * 60.00091 * 9 8 7 30 30 H 1.09005 * 109.46922 * 300.00168 * 9 8 7 31 31 H 0.96996 * 120.00851 * 359.97438 * 12 10 9 32 32 H 1.08997 * 109.46666 * 59.99730 * 13 12 10 33 33 H 1.09002 * 109.46731 * 300.00370 * 13 12 10 34 34 H 1.09005 * 113.61471 * 254.53285 * 16 14 13 35 35 H 1.08996 * 113.61178 * 25.34627 * 16 14 13 36 36 H 0.96702 * 114.00033 * 277.42089 * 19 17 16 37 37 H 1.09002 * 113.61445 * 334.56787 * 20 14 13 38 38 H 1.09002 * 113.61408 * 105.38518 * 20 14 13 39 39 H 1.07999 * 120.02705 * 179.71962 * 21 7 6 40 40 H 1.07996 * 119.97056 * 180.22267 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6842 -2.0605 1.3972 6 6 2.1431 -2.7138 2.5245 7 6 2.8530 -2.0143 3.4896 8 8 3.3061 -2.6549 4.5992 9 6 4.0290 -1.8715 5.5509 10 6 4.4490 -2.7448 6.7050 11 8 4.1574 -3.9220 6.7121 12 7 5.1485 -2.2176 7.7292 13 6 5.5573 -3.0666 8.8510 14 6 6.3312 -2.2279 9.8700 15 1 7.0547 -1.5583 9.4048 16 6 5.4326 -1.5397 10.9110 17 6 6.5088 -1.8904 11.9559 18 1 7.2804 -1.1277 12.0609 19 8 5.9738 -2.3168 13.2104 20 6 6.9121 -3.0514 11.0315 21 6 3.0953 -0.6585 3.3224 22 6 2.6386 -0.0109 2.1908 23 1 -0.3933 0.4416 -0.7651 24 1 1.7924 -0.5138 -0.8900 25 1 1.5878 2.4586 -1.2243 26 1 1.5614 2.4679 1.2085 27 1 1.1310 -2.6045 0.6459 28 1 1.9494 -3.7684 2.6545 29 1 3.3924 -1.0661 5.9171 30 1 4.9137 -1.4478 5.0755 31 1 5.3821 -1.2761 7.7234 32 1 6.1939 -3.8717 8.4841 33 1 4.6730 -3.4907 9.3267 34 1 5.3158 -0.4684 10.7469 35 1 4.4827 -2.0491 11.0727 36 1 5.7183 -1.5911 13.7961 37 1 6.3673 -3.9749 11.2274 38 1 7.9896 -3.2018 10.9641 39 1 3.6438 -0.1108 4.0744 40 1 2.8301 1.0437 2.0585 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12309068_2989410.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:24:11 Heat of formation + Delta-G solvation = -93.699163 kcal Electronic energy + Delta-G solvation = -22408.156903 eV Core-core repulsion = 18770.074607 eV Total energy + Delta-G solvation = -3638.082296 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.53009 -40.85530 -40.07896 -38.88128 -37.30573 -36.62279 -35.08442 -32.45562 -31.82184 -30.52365 -28.12936 -26.87199 -26.13926 -24.11204 -23.38643 -22.23918 -21.72609 -20.60678 -19.46195 -18.87526 -18.53372 -18.05120 -17.50506 -17.29416 -16.78645 -16.75215 -16.48655 -15.93152 -15.68483 -15.55310 -15.21260 -14.90172 -14.65631 -14.41700 -14.10603 -13.92818 -13.75252 -13.57261 -13.45307 -13.31192 -12.76271 -12.61330 -12.46460 -12.19814 -12.01594 -11.89036 -11.68554 -11.47076 -10.97528 -10.80062 -10.48802 -10.20329 -9.99935 -9.18203 -5.00128 0.32030 0.34342 1.26201 1.44019 1.49254 1.56026 1.92112 2.53820 2.64419 3.10243 3.29594 3.36479 3.39890 3.52494 3.63736 3.72913 3.79050 3.81786 3.85885 3.88779 3.94140 4.04798 4.18406 4.27803 4.37046 4.48934 4.54531 4.60061 4.66950 4.67326 4.74135 4.84789 4.98120 4.98456 5.17386 5.19263 5.28308 5.31424 5.55084 5.70239 6.22557 6.37108 6.43930 6.61383 7.08204 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.072 4.072 3 Si 0.682 3.318 4 C -0.110 4.110 5 C -0.050 4.050 6 C -0.145 4.145 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.514 3.486 11 O -0.512 6.512 12 N -0.727 5.727 13 C 0.133 3.867 14 C -0.124 4.124 15 H 0.101 0.899 16 C -0.166 4.166 17 C 0.075 3.925 18 H 0.084 0.916 19 O -0.559 6.559 20 C -0.120 4.120 21 C -0.206 4.206 22 C -0.074 4.074 23 H 0.379 0.621 24 H 0.076 0.924 25 H -0.262 1.262 26 H -0.256 1.256 27 H 0.133 0.867 28 H 0.136 0.864 29 H 0.095 0.905 30 H 0.096 0.904 31 H 0.402 0.598 32 H 0.074 0.926 33 H 0.074 0.926 34 H 0.071 0.929 35 H 0.093 0.907 36 H 0.380 0.620 37 H 0.095 0.905 38 H 0.079 0.921 39 H 0.132 0.868 40 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.592 6.185 -0.132 7.704 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.181 4.181 3 Si 0.583 3.417 4 C -0.111 4.111 5 C -0.068 4.068 6 C -0.164 4.164 7 C 0.088 3.912 8 O -0.200 6.200 9 C -0.039 4.039 10 C 0.299 3.701 11 O -0.386 6.386 12 N -0.381 5.381 13 C 0.010 3.990 14 C -0.143 4.143 15 H 0.119 0.881 16 C -0.203 4.203 17 C 0.016 3.984 18 H 0.101 0.899 19 O -0.365 6.365 20 C -0.158 4.158 21 C -0.225 4.225 22 C -0.092 4.092 23 H 0.227 0.773 24 H 0.094 0.906 25 H -0.187 1.187 26 H -0.181 1.181 27 H 0.151 0.849 28 H 0.154 0.846 29 H 0.112 0.888 30 H 0.114 0.886 31 H 0.237 0.763 32 H 0.092 0.908 33 H 0.092 0.908 34 H 0.090 0.910 35 H 0.111 0.889 36 H 0.227 0.773 37 H 0.114 0.886 38 H 0.098 0.902 39 H 0.150 0.850 40 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 4.347 5.028 0.230 6.651 hybrid contribution -1.021 1.211 -0.273 1.607 sum 3.326 6.239 -0.043 7.070 Atomic orbital electron populations 1.86602 1.17936 1.80103 1.49725 1.24738 0.84349 1.10791 0.98252 0.95136 0.91630 0.74766 0.80160 1.19152 1.01415 0.94259 0.96237 1.20837 0.96140 0.93534 0.96314 1.20512 1.01268 1.01109 0.93503 1.19065 0.94402 0.90991 0.86701 1.86173 1.68558 1.36561 1.28747 1.22467 0.97906 0.94004 0.89480 1.20040 0.78529 0.88489 0.83069 1.90796 1.53330 1.16230 1.78218 1.45798 1.57374 1.13687 1.21253 1.21378 0.99086 0.92968 0.85576 1.22578 0.98707 0.98825 0.94186 0.88068 1.23858 0.99117 1.01178 0.96195 1.23356 0.95164 0.97211 0.82664 0.89869 1.86543 1.84264 1.37292 1.28371 1.23049 1.01813 0.98284 0.92634 1.21140 1.07098 0.93612 1.00608 1.20760 0.96547 0.99221 0.92624 0.77316 0.90646 1.18695 1.18078 0.84906 0.84578 0.88757 0.88618 0.76346 0.90776 0.90809 0.91031 0.88888 0.77250 0.88616 0.90245 0.84999 0.85264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.73 12.81 -35.23 -0.45 -1.19 16 2 C -0.07 0.00 2.79 36.01 0.10 0.10 16 3 Si 0.68 -0.73 29.85 -169.99 -5.07 -5.80 16 4 C -0.11 -0.15 5.39 -104.60 -0.56 -0.72 16 5 C -0.05 -0.09 9.68 -39.61 -0.38 -0.47 16 6 C -0.15 -0.34 9.99 -39.44 -0.39 -0.74 16 7 C 0.13 0.30 6.69 -39.22 -0.26 0.04 16 8 O -0.29 -0.91 9.67 -39.35 -0.38 -1.29 16 9 C 0.04 -0.03 5.22 36.00 0.19 0.15 16 10 C 0.51 0.78 7.91 -10.99 -0.09 0.70 16 11 O -0.51 -3.48 16.50 -14.35 -0.24 -3.72 16 12 N -0.73 1.33 5.56 -60.29 -0.33 0.99 16 13 C 0.13 -0.14 5.51 -4.04 -0.02 -0.16 16 14 C -0.12 0.37 3.76 -89.81 -0.34 0.04 16 15 H 0.10 -0.45 8.14 -51.93 -0.42 -0.87 16 16 C -0.17 0.43 7.48 -25.78 -0.19 0.24 16 17 C 0.08 -0.13 5.23 -25.77 -0.13 -0.27 16 18 H 0.08 -0.26 8.14 -51.93 -0.42 -0.69 16 19 O -0.56 -0.05 13.67 -35.23 -0.48 -0.53 16 20 C -0.12 0.20 7.46 -25.92 -0.19 0.00 16 21 C -0.21 -0.05 9.04 -39.43 -0.36 -0.41 16 22 C -0.07 -0.03 8.66 -39.60 -0.34 -0.38 16 23 H 0.38 -0.99 8.74 45.56 0.40 -0.60 16 24 H 0.08 -0.13 7.96 -51.93 -0.41 -0.54 16 25 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 26 H -0.26 -0.48 7.05 56.52 0.40 -0.09 16 27 H 0.13 0.07 8.06 -52.48 -0.42 -0.35 16 28 H 0.14 0.24 8.06 -52.48 -0.42 -0.19 16 29 H 0.09 -0.31 7.65 -51.93 -0.40 -0.70 16 30 H 0.10 -0.35 7.67 -51.93 -0.40 -0.75 16 31 H 0.40 -2.08 8.47 -40.82 -0.35 -2.42 16 32 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 33 H 0.07 0.03 7.84 -51.93 -0.41 -0.37 16 34 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 35 H 0.09 -0.11 7.89 -51.93 -0.41 -0.52 16 36 H 0.38 -1.48 9.12 45.56 0.42 -1.07 16 37 H 0.10 -0.04 8.10 -51.93 -0.42 -0.46 16 38 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 39 H 0.13 -0.36 6.30 -52.49 -0.33 -0.69 16 40 H 0.13 -0.19 4.86 -52.49 -0.26 -0.44 16 LS Contribution 338.43 15.07 5.10 5.10 Total: 0.00 -11.07 338.43 -9.56 -20.63 By element: Atomic # 1 Polarization: -7.59 SS G_CDS: -4.73 Total: -12.32 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -2.98 Total: -1.88 kcal Atomic # 7 Polarization: 1.33 SS G_CDS: -0.33 Total: 0.99 kcal Atomic # 8 Polarization: -5.18 SS G_CDS: -1.55 Total: -6.73 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: -5.07 Total: -5.80 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -11.07 -9.56 -20.63 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_2989410.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.067 kcal (2) G-P(sol) polarization free energy of solvation -11.067 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.135 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.564 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.632 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.699 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds