Wall clock time and date at job start Tue Mar 9 2021 14:24:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86303 * 109.47084 * 2 1 4 4 C 1.50703 * 109.47265 * 119.99874 * 2 1 3 5 5 C 1.38257 * 119.94452 * 65.00243 * 4 2 1 6 6 C 1.38148 * 120.05644 * 180.02562 * 5 4 2 7 7 C 1.38733 * 119.94445 * 359.97438 * 6 5 4 8 8 O 1.35895 * 120.05525 * 180.02562 * 7 6 5 9 9 C 1.42900 * 116.99738 * 180.02562 * 8 7 6 10 10 C 1.50698 * 109.47073 * 180.02562 * 9 8 7 11 11 C 1.36418 * 125.80366 * 90.00051 * 10 9 8 12 12 C 1.47374 * 127.19057 * 359.97438 * 11 10 9 13 13 O 1.21616 * 120.00151 * 0.02562 * 12 11 10 14 14 N 1.34783 * 120.00102 * 180.02562 * 12 11 10 15 15 C 1.46498 * 120.00214 * 180.02562 * 14 12 11 16 16 C 1.52997 * 109.47070 * 179.97438 * 15 14 12 17 17 H 1.08994 * 112.91116 * 43.74800 * 16 15 14 18 18 C 1.53787 * 113.61251 * 175.00109 * 16 15 14 19 19 C 1.53779 * 87.07963 * 139.97890 * 18 16 15 20 20 H 1.09001 * 113.61377 * 89.20020 * 19 18 16 21 21 O 1.42901 * 113.61102 * 220.01463 * 19 18 16 22 22 C 1.53779 * 87.08402 * 334.56577 * 19 18 16 23 23 C 1.47026 * 105.61702 * 180.26483 * 11 10 9 24 24 C 1.34177 * 105.95221 * 359.56513 * 23 11 10 25 25 O 1.33661 * 125.80325 * 269.99734 * 10 9 8 26 26 C 1.38736 * 119.88541 * 0.27885 * 7 6 5 27 27 C 1.38141 * 119.94386 * 359.46689 * 26 7 6 28 28 H 0.96695 * 114.00732 * 299.99608 * 1 2 3 29 29 H 1.08995 * 109.47762 * 240.00067 * 2 1 3 30 30 H 1.48505 * 109.99655 * 299.99569 * 3 2 1 31 31 H 1.48493 * 110.00108 * 61.31500 * 3 2 1 32 32 H 1.07998 * 119.97758 * 359.97438 * 5 4 2 33 33 H 1.08002 * 120.02595 * 179.97438 * 6 5 4 34 34 H 1.09001 * 109.47766 * 59.99966 * 9 8 7 35 35 H 1.09000 * 109.46974 * 299.99857 * 9 8 7 36 36 H 0.96997 * 119.99499 * 0.02562 * 14 12 11 37 37 H 1.08998 * 109.46965 * 59.99571 * 15 14 12 38 38 H 1.09003 * 109.46664 * 299.99726 * 15 14 12 39 39 H 1.08997 * 113.61028 * 254.52850 * 18 16 15 40 40 H 1.09000 * 113.61529 * 25.42990 * 18 16 15 41 41 H 0.96703 * 113.99679 * 179.97438 * 21 19 18 42 42 H 1.09002 * 113.61557 * 270.88569 * 22 19 18 43 43 H 1.09004 * 113.61501 * 139.97990 * 22 19 18 44 44 H 1.07995 * 127.02014 * 179.73832 * 23 11 10 45 45 H 1.08002 * 125.44272 * 180.14885 * 24 23 11 46 46 H 1.07999 * 120.02460 * 179.72252 * 26 7 6 47 47 H 1.08000 * 119.97088 * 180.23251 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6841 -2.0604 1.3973 6 6 2.1431 -2.7138 2.5246 7 6 2.8531 -2.0143 3.4896 8 8 3.3061 -2.6549 4.5991 9 6 4.0292 -1.8715 5.5507 10 6 4.4492 -2.7447 6.7049 11 6 5.6171 -3.4441 6.7927 12 6 6.7012 -3.4966 5.7957 13 8 6.6046 -2.8685 4.7588 14 7 7.7996 -4.2407 6.0331 15 6 8.8775 -4.2924 5.0423 16 6 9.9977 -5.2000 5.5542 17 1 9.6260 -6.1226 5.9999 18 6 11.1270 -5.4201 4.5339 19 6 12.1077 -5.3083 5.7131 20 1 12.3139 -6.2608 6.2013 21 8 13.2945 -4.5753 5.4030 22 6 11.0335 -4.4690 6.4248 23 6 5.5652 -4.1403 8.0867 24 6 4.3970 -3.7912 8.6466 25 8 3.7407 -2.9656 7.8165 26 6 3.0953 -0.6585 3.3223 27 6 2.6388 -0.0109 2.1908 28 1 -0.3934 0.4416 0.7650 29 1 1.7924 -0.5138 -0.8899 30 1 1.5614 2.4678 -1.2086 31 1 1.5878 2.4586 1.2241 32 1 1.1310 -2.6045 0.6460 33 1 1.9493 -3.7683 2.6546 34 1 3.3927 -1.0659 5.9170 35 1 4.9139 -1.4479 5.0754 36 1 7.8764 -4.7419 6.8599 37 1 9.2696 -3.2885 4.8792 38 1 8.4894 -4.6878 4.1035 39 1 11.1112 -6.4069 4.0712 40 1 11.2232 -4.6127 3.8079 41 1 13.9151 -4.5012 6.1410 42 1 11.1040 -3.4015 6.2158 43 1 10.9421 -4.6880 7.4887 44 1 6.3156 -4.7961 8.5027 45 1 4.0394 -4.1252 9.6095 46 1 3.6439 -0.1108 4.0743 47 1 2.8303 1.0437 2.0584 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12309068_4549634.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:24:28 Heat of formation + Delta-G solvation = -76.316594 kcal Electronic energy + Delta-G solvation = -31083.801401 eV Core-core repulsion = 26587.574637 eV Total energy + Delta-G solvation = -4496.226764 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -43.74825 -41.19195 -40.90430 -39.94805 -39.14515 -37.20587 -36.61660 -35.07555 -34.04784 -32.81956 -31.91087 -31.33230 -29.33429 -27.65482 -26.85375 -26.10037 -24.68681 -23.74294 -23.33077 -22.32780 -22.00792 -21.25910 -20.44587 -19.40406 -19.24597 -18.50606 -18.25732 -17.34911 -17.22319 -17.11797 -16.85962 -16.63830 -16.53983 -16.31396 -16.07741 -16.04823 -15.69057 -15.43111 -15.09159 -14.82466 -14.63919 -14.47661 -14.25566 -14.15425 -13.93516 -13.59201 -13.54988 -13.50281 -13.35328 -13.08928 -12.69653 -12.57626 -12.19744 -12.04865 -11.99105 -11.98098 -11.52034 -11.43996 -11.03197 -10.97613 -10.81622 -10.50560 -10.13686 -9.94604 -9.86469 -9.12614 -4.90087 0.03346 0.38478 0.40275 0.91459 1.35419 1.48618 1.63730 2.00954 2.09526 2.19182 2.53795 2.74735 3.12638 3.28110 3.35755 3.43449 3.46337 3.61386 3.65961 3.67736 3.74767 3.81561 3.84144 3.93621 3.97384 4.07950 4.16949 4.21631 4.30503 4.36349 4.50985 4.53229 4.59440 4.60561 4.63418 4.70030 4.72626 4.75865 4.78479 4.88624 5.01588 5.03613 5.08586 5.23078 5.24535 5.35708 5.39886 5.57916 5.77532 5.83576 6.37319 6.43636 6.47835 6.62772 7.17943 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.069 4.069 3 Si 0.684 3.316 4 C -0.156 4.156 5 C -0.051 4.051 6 C -0.149 4.149 7 C 0.143 3.857 8 O -0.304 6.304 9 C 0.136 3.864 10 C 0.064 3.936 11 C -0.210 4.210 12 C 0.588 3.412 13 O -0.532 6.532 14 N -0.721 5.721 15 C 0.133 3.867 16 C -0.125 4.125 17 H 0.100 0.900 18 C -0.119 4.119 19 C 0.075 3.925 20 H 0.083 0.917 21 O -0.559 6.559 22 C -0.165 4.165 23 C -0.196 4.196 24 C -0.015 4.015 25 O -0.165 6.165 26 C -0.202 4.202 27 C -0.076 4.076 28 H 0.375 0.625 29 H 0.117 0.883 30 H -0.258 1.258 31 H -0.261 1.261 32 H 0.133 0.867 33 H 0.133 0.867 34 H 0.083 0.917 35 H 0.117 0.883 36 H 0.401 0.599 37 H 0.073 0.927 38 H 0.074 0.926 39 H 0.079 0.921 40 H 0.096 0.904 41 H 0.380 0.620 42 H 0.093 0.907 43 H 0.070 0.930 44 H 0.161 0.839 45 H 0.214 0.786 46 H 0.132 0.868 47 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.960 -2.193 6.037 7.545 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.179 4.179 3 Si 0.585 3.415 4 C -0.157 4.157 5 C -0.069 4.069 6 C -0.167 4.167 7 C 0.098 3.902 8 O -0.218 6.218 9 C 0.061 3.939 10 C 0.011 3.989 11 C -0.214 4.214 12 C 0.375 3.625 13 O -0.411 6.411 14 N -0.372 5.372 15 C 0.010 3.990 16 C -0.143 4.143 17 H 0.118 0.882 18 C -0.157 4.157 19 C 0.016 3.984 20 H 0.101 0.899 21 O -0.365 6.365 22 C -0.203 4.203 23 C -0.215 4.215 24 C -0.081 4.081 25 O -0.061 6.061 26 C -0.221 4.221 27 C -0.094 4.094 28 H 0.223 0.777 29 H 0.135 0.865 30 H -0.183 1.183 31 H -0.186 1.186 32 H 0.151 0.849 33 H 0.151 0.849 34 H 0.101 0.899 35 H 0.134 0.866 36 H 0.236 0.764 37 H 0.092 0.908 38 H 0.092 0.908 39 H 0.097 0.903 40 H 0.114 0.886 41 H 0.227 0.773 42 H 0.111 0.889 43 H 0.089 0.911 44 H 0.179 0.821 45 H 0.231 0.769 46 H 0.150 0.850 47 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 3.200 -1.244 4.258 5.470 hybrid contribution -0.485 -0.615 1.920 2.073 sum 2.715 -1.858 6.178 6.999 Atomic orbital electron populations 1.86594 1.17882 1.79965 1.49283 1.24936 0.83798 1.10780 0.98417 0.94969 0.91767 0.74686 0.80038 1.20155 1.02748 0.95090 0.97716 1.20825 0.96499 0.93468 0.96142 1.20492 1.01693 1.00834 0.93699 1.18963 0.93798 0.90943 0.86522 1.86084 1.68671 1.37865 1.29130 1.21111 0.98384 0.90307 0.84105 1.21952 0.90092 0.99278 0.87571 1.21225 0.97609 1.04839 0.97751 1.17172 0.81042 0.79072 0.85203 1.90808 1.79621 1.44198 1.26425 1.45739 1.18747 1.49898 1.22834 1.21366 0.85974 1.00061 0.91648 1.22583 0.93741 0.99375 0.98643 0.88180 1.23048 0.92481 1.03519 0.96684 1.23316 0.83815 0.94218 0.97038 0.89920 1.86546 1.31779 1.76369 1.41799 1.23809 0.96110 1.00932 0.99441 1.22887 0.99842 1.04361 0.94458 1.24059 0.93085 0.94341 0.96654 1.83801 1.44029 1.53141 1.25081 1.21178 1.06434 0.93699 1.00759 1.20823 0.96221 0.99409 0.92901 0.77730 0.86503 1.18286 1.18616 0.84890 0.84906 0.89902 0.86558 0.76445 0.90825 0.90818 0.90269 0.88598 0.77291 0.88880 0.91085 0.82115 0.76932 0.85050 0.85308 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.08 12.83 -35.23 -0.45 -1.54 16 2 C -0.07 -0.05 2.80 36.01 0.10 0.05 16 3 Si 0.68 -0.07 29.88 -169.99 -5.08 -5.15 16 4 C -0.16 -0.22 5.35 -104.60 -0.56 -0.78 16 5 C -0.05 -0.10 9.68 -39.61 -0.38 -0.48 16 6 C -0.15 -0.39 9.99 -39.43 -0.39 -0.79 16 7 C 0.14 0.45 6.69 -39.21 -0.26 0.19 16 8 O -0.30 -1.17 10.12 -19.41 -0.20 -1.37 16 9 C 0.14 0.25 4.74 36.00 0.17 0.42 16 10 C 0.06 0.14 7.00 -34.97 -0.24 -0.11 16 11 C -0.21 -0.34 6.31 -103.28 -0.65 -1.00 16 12 C 0.59 1.56 7.81 -12.54 -0.10 1.46 16 13 O -0.53 -3.06 14.84 5.26 0.08 -2.98 16 14 N -0.72 0.29 5.55 -61.40 -0.34 -0.05 16 15 C 0.13 -0.07 5.51 -4.04 -0.02 -0.09 16 16 C -0.12 0.31 3.76 -89.80 -0.34 -0.03 16 17 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 18 C -0.12 0.16 7.47 -25.92 -0.19 -0.03 16 19 C 0.08 -0.12 5.21 -25.92 -0.14 -0.25 16 20 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 21 O -0.56 -0.08 13.67 -35.23 -0.48 -0.56 16 22 C -0.17 0.38 7.46 -25.92 -0.19 0.18 16 23 C -0.20 0.26 10.60 -37.45 -0.40 -0.14 16 24 C -0.01 0.02 12.03 29.30 0.35 0.38 16 25 O -0.17 -0.22 10.52 7.64 0.08 -0.14 16 26 C -0.20 -0.34 9.04 -39.43 -0.36 -0.70 16 27 C -0.08 -0.08 8.66 -39.61 -0.34 -0.42 16 28 H 0.38 -0.28 8.70 45.56 0.40 0.12 16 29 H 0.12 0.00 7.96 -51.93 -0.41 -0.41 16 30 H -0.26 -0.80 7.11 56.52 0.40 -0.40 16 31 H -0.26 -0.42 7.01 56.52 0.40 -0.03 16 32 H 0.13 0.10 8.06 -52.49 -0.42 -0.32 16 33 H 0.13 0.23 8.06 -52.49 -0.42 -0.19 16 34 H 0.08 -0.03 7.65 -51.93 -0.40 -0.43 16 35 H 0.12 0.23 6.01 -51.93 -0.31 -0.08 16 36 H 0.40 -1.19 7.64 -40.82 -0.31 -1.50 16 37 H 0.07 0.04 7.84 -51.93 -0.41 -0.36 16 38 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 39 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 40 H 0.10 -0.03 8.10 -51.93 -0.42 -0.45 16 41 H 0.38 -1.46 9.12 45.56 0.42 -1.05 16 42 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 43 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 44 H 0.16 -0.70 7.74 -52.49 -0.41 -1.11 16 45 H 0.21 -1.16 8.06 -52.49 -0.42 -1.58 16 46 H 0.13 -0.03 6.30 -52.49 -0.33 -0.36 16 47 H 0.13 -0.10 4.83 -52.49 -0.25 -0.35 16 LS Contribution 396.33 15.07 5.97 5.97 Total: 0.00 -10.20 396.33 -9.80 -20.00 By element: Atomic # 1 Polarization: -6.62 SS G_CDS: -5.44 Total: -12.06 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -3.95 Total: -2.13 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: -0.34 Total: -0.05 kcal Atomic # 8 Polarization: -5.61 SS G_CDS: -0.97 Total: -6.59 kcal Atomic # 14 Polarization: -0.07 SS G_CDS: -5.08 Total: -5.15 kcal Total LS contribution 5.97 Total: 5.97 kcal Total: -10.20 -9.80 -20.00 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_4549634.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.313 kcal (2) G-P(sol) polarization free energy of solvation -10.199 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.513 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.804 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.003 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.317 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds