Wall clock time and date at job start Tue Mar 9 2021 14:24:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86303 * 109.47084 * 2 1 4 4 C 1.50703 * 109.47265 * 119.99874 * 2 1 3 5 5 C 1.38257 * 119.94452 * 65.00243 * 4 2 1 6 6 C 1.38148 * 120.05644 * 180.02562 * 5 4 2 7 7 C 1.38733 * 119.94445 * 359.97438 * 6 5 4 8 8 O 1.35895 * 120.05525 * 180.02562 * 7 6 5 9 9 C 1.42900 * 116.99738 * 180.02562 * 8 7 6 10 10 C 1.50698 * 109.47073 * 180.02562 * 9 8 7 11 11 C 1.36418 * 125.80366 * 90.00051 * 10 9 8 12 12 C 1.47374 * 127.19057 * 359.97438 * 11 10 9 13 13 O 1.21616 * 120.00151 * 0.02562 * 12 11 10 14 14 N 1.34783 * 120.00102 * 180.02562 * 12 11 10 15 15 C 1.46498 * 120.00214 * 180.02562 * 14 12 11 16 16 C 1.52997 * 109.47070 * 179.97438 * 15 14 12 17 17 H 1.08994 * 112.91116 * 43.74800 * 16 15 14 18 18 C 1.53787 * 113.61251 * 175.00109 * 16 15 14 19 19 C 1.53779 * 87.07963 * 139.97890 * 18 16 15 20 20 H 1.09001 * 113.61377 * 89.20020 * 19 18 16 21 21 O 1.42901 * 113.61102 * 220.01463 * 19 18 16 22 22 C 1.53779 * 87.08402 * 334.56577 * 19 18 16 23 23 C 1.47026 * 105.61702 * 180.26483 * 11 10 9 24 24 C 1.34177 * 105.95221 * 359.56513 * 23 11 10 25 25 O 1.33661 * 125.80325 * 269.99734 * 10 9 8 26 26 C 1.38736 * 119.88541 * 0.27885 * 7 6 5 27 27 C 1.38141 * 119.94386 * 359.46689 * 26 7 6 28 28 H 0.96695 * 114.00732 * 299.99608 * 1 2 3 29 29 H 1.08995 * 109.47762 * 240.00067 * 2 1 3 30 30 H 1.48505 * 109.99655 * 299.99569 * 3 2 1 31 31 H 1.48493 * 110.00108 * 61.31500 * 3 2 1 32 32 H 1.07998 * 119.97758 * 359.97438 * 5 4 2 33 33 H 1.08002 * 120.02595 * 179.97438 * 6 5 4 34 34 H 1.09001 * 109.47766 * 59.99966 * 9 8 7 35 35 H 1.09000 * 109.46974 * 299.99857 * 9 8 7 36 36 H 0.96997 * 119.99499 * 0.02562 * 14 12 11 37 37 H 1.08998 * 109.46965 * 59.99571 * 15 14 12 38 38 H 1.09003 * 109.46664 * 299.99726 * 15 14 12 39 39 H 1.08997 * 113.61028 * 254.52850 * 18 16 15 40 40 H 1.09000 * 113.61529 * 25.42990 * 18 16 15 41 41 H 0.96703 * 113.99679 * 179.97438 * 21 19 18 42 42 H 1.09002 * 113.61557 * 270.88569 * 22 19 18 43 43 H 1.09004 * 113.61501 * 139.97990 * 22 19 18 44 44 H 1.07995 * 127.02014 * 179.73832 * 23 11 10 45 45 H 1.08002 * 125.44272 * 180.14885 * 24 23 11 46 46 H 1.07999 * 120.02460 * 179.72252 * 26 7 6 47 47 H 1.08000 * 119.97088 * 180.23251 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6841 -2.0604 1.3973 6 6 2.1431 -2.7138 2.5246 7 6 2.8531 -2.0143 3.4896 8 8 3.3061 -2.6549 4.5991 9 6 4.0292 -1.8715 5.5507 10 6 4.4492 -2.7447 6.7049 11 6 5.6171 -3.4441 6.7927 12 6 6.7012 -3.4966 5.7957 13 8 6.6046 -2.8685 4.7588 14 7 7.7996 -4.2407 6.0331 15 6 8.8775 -4.2924 5.0423 16 6 9.9977 -5.2000 5.5542 17 1 9.6260 -6.1226 5.9999 18 6 11.1270 -5.4201 4.5339 19 6 12.1077 -5.3083 5.7131 20 1 12.3139 -6.2608 6.2013 21 8 13.2945 -4.5753 5.4030 22 6 11.0335 -4.4690 6.4248 23 6 5.5652 -4.1403 8.0867 24 6 4.3970 -3.7912 8.6466 25 8 3.7407 -2.9656 7.8165 26 6 3.0953 -0.6585 3.3223 27 6 2.6388 -0.0109 2.1908 28 1 -0.3934 0.4416 0.7650 29 1 1.7924 -0.5138 -0.8899 30 1 1.5614 2.4678 -1.2086 31 1 1.5878 2.4586 1.2241 32 1 1.1310 -2.6045 0.6460 33 1 1.9493 -3.7683 2.6546 34 1 3.3927 -1.0659 5.9170 35 1 4.9139 -1.4479 5.0754 36 1 7.8764 -4.7419 6.8599 37 1 9.2696 -3.2885 4.8792 38 1 8.4894 -4.6878 4.1035 39 1 11.1112 -6.4069 4.0712 40 1 11.2232 -4.6127 3.8079 41 1 13.9151 -4.5012 6.1410 42 1 11.1040 -3.4015 6.2158 43 1 10.9421 -4.6880 7.4887 44 1 6.3156 -4.7961 8.5027 45 1 4.0394 -4.1252 9.6095 46 1 3.6439 -0.1108 4.0743 47 1 2.8303 1.0437 2.0584 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12309068_4549634.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:24:27 Heat of formation + Delta-G solvation = -79.588234 kcal Electronic energy + Delta-G solvation = -31083.943270 eV Core-core repulsion = 26587.574637 eV Total energy + Delta-G solvation = -4496.368633 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.150 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -43.72687 -41.32329 -40.90904 -39.97677 -39.27290 -37.32628 -36.61261 -35.13216 -34.04547 -32.86583 -32.00695 -31.41886 -29.34058 -27.67880 -26.70898 -26.19408 -24.71074 -23.83129 -23.26407 -22.42411 -22.03351 -21.25240 -20.36237 -19.53457 -19.23032 -18.46765 -18.30921 -17.43906 -17.25059 -17.17090 -16.95964 -16.71571 -16.49318 -16.37367 -16.10929 -16.08856 -15.75265 -15.49210 -15.04830 -14.84563 -14.71398 -14.54106 -14.39890 -14.19941 -13.86410 -13.64955 -13.54370 -13.47395 -13.43649 -13.13457 -12.63466 -12.43970 -12.34085 -12.15918 -12.08608 -11.86289 -11.63386 -11.29800 -11.19462 -10.98046 -10.70548 -10.59636 -10.20333 -10.07428 -9.83599 -9.27670 -4.91825 -0.05159 0.24328 0.27338 1.02848 1.31524 1.50556 1.58350 1.93929 2.03171 2.12332 2.45588 2.61407 3.29998 3.33250 3.43688 3.45546 3.57481 3.63203 3.67153 3.72991 3.77535 3.82004 3.88544 3.91996 3.99670 4.09812 4.21767 4.26965 4.34782 4.40077 4.44843 4.53221 4.57644 4.66517 4.67380 4.78898 4.79554 4.81240 4.84471 4.93441 5.01051 5.12031 5.13730 5.23026 5.25327 5.30724 5.45107 5.46047 5.66500 5.87616 6.23380 6.43017 6.49470 6.90481 7.09222 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.077 4.077 3 Si 0.762 3.238 4 C -0.157 4.157 5 C -0.057 4.057 6 C -0.163 4.163 7 C 0.124 3.876 8 O -0.322 6.322 9 C 0.135 3.865 10 C 0.039 3.961 11 C -0.223 4.223 12 C 0.580 3.420 13 O -0.573 6.573 14 N -0.704 5.704 15 C 0.134 3.866 16 C -0.110 4.110 17 H 0.122 0.878 18 C -0.129 4.129 19 C 0.072 3.928 20 H 0.102 0.898 21 O -0.585 6.585 22 C -0.160 4.160 23 C -0.196 4.196 24 C -0.012 4.012 25 O -0.178 6.178 26 C -0.206 4.206 27 C -0.078 4.078 28 H 0.386 0.614 29 H 0.124 0.876 30 H -0.302 1.302 31 H -0.279 1.279 32 H 0.141 0.859 33 H 0.134 0.866 34 H 0.099 0.901 35 H 0.108 0.892 36 H 0.416 0.584 37 H 0.058 0.942 38 H 0.060 0.940 39 H 0.085 0.915 40 H 0.077 0.923 41 H 0.394 0.606 42 H 0.076 0.924 43 H 0.088 0.912 44 H 0.194 0.806 45 H 0.253 0.747 46 H 0.147 0.853 47 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.434 -3.006 7.863 9.515 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.357 6.357 2 C -0.186 4.186 3 Si 0.668 3.332 4 C -0.158 4.158 5 C -0.075 4.075 6 C -0.181 4.181 7 C 0.079 3.921 8 O -0.237 6.237 9 C 0.060 3.940 10 C -0.014 4.014 11 C -0.228 4.228 12 C 0.368 3.632 13 O -0.454 6.454 14 N -0.356 5.356 15 C 0.011 3.989 16 C -0.128 4.128 17 H 0.140 0.860 18 C -0.167 4.167 19 C 0.014 3.986 20 H 0.120 0.880 21 O -0.394 6.394 22 C -0.197 4.197 23 C -0.214 4.214 24 C -0.078 4.078 25 O -0.074 6.074 26 C -0.224 4.224 27 C -0.095 4.095 28 H 0.235 0.765 29 H 0.142 0.858 30 H -0.230 1.230 31 H -0.206 1.206 32 H 0.159 0.841 33 H 0.152 0.848 34 H 0.117 0.883 35 H 0.126 0.874 36 H 0.253 0.747 37 H 0.076 0.924 38 H 0.079 0.921 39 H 0.104 0.896 40 H 0.096 0.904 41 H 0.244 0.756 42 H 0.095 0.905 43 H 0.107 0.893 44 H 0.211 0.789 45 H 0.268 0.732 46 H 0.164 0.836 47 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 3.702 -2.098 6.135 7.466 hybrid contribution -0.623 -0.378 1.359 1.542 sum 3.079 -2.475 7.495 8.472 Atomic orbital electron populations 1.86563 1.18586 1.80399 1.50132 1.25149 0.83341 1.11716 0.98398 0.94039 0.90504 0.72185 0.76485 1.20273 1.02554 0.94963 0.97989 1.20964 0.96565 0.93903 0.96059 1.20638 1.02207 1.01119 0.94155 1.19193 0.94450 0.91721 0.86700 1.86046 1.69025 1.38949 1.29669 1.21143 0.98179 0.90730 0.83900 1.22046 0.90773 1.00410 0.88162 1.21381 0.97136 1.05405 0.98830 1.17472 0.81824 0.78911 0.84955 1.90781 1.80522 1.46012 1.28128 1.45629 1.17757 1.48940 1.23271 1.21323 0.86433 0.99733 0.91418 1.22522 0.92522 0.99613 0.98151 0.85999 1.23100 0.93504 1.03223 0.96910 1.23467 0.83369 0.94966 0.96836 0.87999 1.86502 1.32727 1.76808 1.43322 1.23730 0.95728 0.99875 1.00396 1.23261 1.00816 1.04400 0.92969 1.24926 0.92744 0.92869 0.97244 1.83795 1.44552 1.53871 1.25154 1.21408 1.06307 0.93340 1.01395 1.21050 0.95724 1.00280 0.92450 0.76533 0.85834 1.22997 1.20593 0.84140 0.84849 0.88262 0.87421 0.74665 0.92356 0.92145 0.89625 0.90414 0.75556 0.90539 0.89305 0.78931 0.73161 0.83555 0.83459 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.36 12.83 -148.98 -1.91 -4.27 16 2 C -0.08 -0.12 2.80 71.24 0.20 0.08 16 3 Si 0.76 -0.18 29.88 68.60 2.05 1.87 16 4 C -0.16 -0.50 5.35 -19.85 -0.11 -0.60 16 5 C -0.06 -0.27 9.68 22.25 0.22 -0.05 16 6 C -0.16 -1.14 9.99 22.37 0.22 -0.92 16 7 C 0.12 1.00 6.69 22.51 0.15 1.15 16 8 O -0.32 -3.18 10.12 -92.37 -0.93 -4.11 16 9 C 0.13 0.73 4.74 71.24 0.34 1.07 16 10 C 0.04 0.21 7.00 25.26 0.18 0.39 16 11 C -0.22 -0.85 6.31 -18.99 -0.12 -0.97 16 12 C 0.58 3.79 7.81 86.65 0.68 4.46 16 13 O -0.57 -8.00 14.84 -4.08 -0.06 -8.06 16 14 N -0.70 0.44 5.55 -466.42 -2.59 -2.15 16 15 C 0.13 -0.01 5.51 86.38 0.48 0.47 16 16 C -0.11 0.59 3.76 -10.27 -0.04 0.55 16 17 H 0.12 -1.14 8.14 -2.39 -0.02 -1.16 16 18 C -0.13 0.31 7.47 31.12 0.23 0.54 16 19 C 0.07 -0.26 5.21 31.12 0.16 -0.10 16 20 H 0.10 -0.77 8.14 -2.39 -0.02 -0.79 16 21 O -0.59 -0.24 13.67 -148.98 -2.04 -2.28 16 22 C -0.16 0.83 7.46 31.12 0.23 1.06 16 23 C -0.20 0.79 10.60 23.65 0.25 1.04 16 24 C -0.01 0.06 12.03 66.89 0.80 0.86 16 25 O -0.18 -0.48 10.52 4.40 0.05 -0.44 16 26 C -0.21 -0.89 9.04 22.37 0.20 -0.69 16 27 C -0.08 -0.18 8.66 22.25 0.19 0.01 16 28 H 0.39 -0.48 8.70 -74.06 -0.64 -1.13 16 29 H 0.12 0.00 7.96 -2.39 -0.02 -0.02 16 30 H -0.30 -2.19 7.11 99.48 0.71 -1.48 16 31 H -0.28 -0.79 7.01 99.48 0.70 -0.09 16 32 H 0.14 0.35 8.06 -2.91 -0.02 0.32 16 33 H 0.13 0.76 8.06 -2.91 -0.02 0.74 16 34 H 0.10 0.07 7.65 -2.39 -0.02 0.05 16 35 H 0.11 0.71 6.01 -2.39 -0.01 0.69 16 36 H 0.42 -2.98 7.64 -92.71 -0.71 -3.69 16 37 H 0.06 0.19 7.84 -2.39 -0.02 0.17 16 38 H 0.06 0.17 8.14 -2.39 -0.02 0.16 16 39 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 40 H 0.08 0.09 8.10 -2.39 -0.02 0.07 16 41 H 0.39 -3.09 9.12 -74.05 -0.68 -3.77 16 42 H 0.08 -0.11 7.90 -2.39 -0.02 -0.13 16 43 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 44 H 0.19 -2.24 7.74 -2.91 -0.02 -2.26 16 45 H 0.25 -3.46 8.06 -2.91 -0.02 -3.48 16 46 H 0.15 0.06 6.30 -2.91 -0.02 0.04 16 47 H 0.15 -0.31 4.83 -2.91 -0.01 -0.32 16 Total: 0.00 -26.15 396.33 -2.12 -28.27 By element: Atomic # 1 Polarization: -16.24 SS G_CDS: -0.96 Total: -17.19 kcal Atomic # 6 Polarization: 4.09 SS G_CDS: 4.27 Total: 8.36 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -2.59 Total: -2.15 kcal Atomic # 8 Polarization: -14.26 SS G_CDS: -4.90 Total: -19.16 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: 2.05 Total: 1.87 kcal Total: -26.15 -2.12 -28.27 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_4549634.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.315 kcal (2) G-P(sol) polarization free energy of solvation -26.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.464 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.124 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.273 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.588 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds