Wall clock time and date at job start Tue Mar 9 2021 14:24:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37643 * 125.67621 * 2 1 4 4 C 1.46665 * 126.22772 * 359.97438 * 3 2 1 5 5 O 1.21695 * 120.00000 * 354.71995 * 4 3 2 6 6 N 1.34780 * 120.00463 * 174.71450 * 4 3 2 7 7 C 1.46496 * 120.00387 * 185.08955 * 6 4 3 8 8 C 1.52995 * 109.47474 * 180.02562 * 7 6 4 9 9 H 1.09004 * 112.85109 * 314.67541 * 8 7 6 10 10 C 1.53787 * 113.61368 * 85.86322 * 8 7 6 11 11 C 1.53949 * 87.01835 * 139.95316 * 10 8 7 12 12 H 1.09006 * 113.53745 * 89.19179 * 11 10 8 13 13 O 1.42901 * 113.74605 * 220.05613 * 11 10 8 14 14 C 1.53774 * 113.61753 * 183.47156 * 8 7 6 15 15 C 1.37895 * 107.54948 * 179.74929 * 3 2 1 16 16 C 1.39880 * 107.09031 * 0.42359 * 15 3 2 17 17 Br 1.89096 * 126.07294 * 179.83684 * 16 15 3 18 18 C 1.35504 * 107.85188 * 359.57625 * 16 15 3 19 19 C 1.50702 * 125.57038 * 180.28895 * 18 16 15 20 20 O 1.42904 * 109.47415 * 115.21463 * 19 18 16 21 21 Si 1.86299 * 109.47025 * 235.21447 * 19 18 16 22 22 H 1.08995 * 109.47470 * 275.52554 * 1 2 3 23 23 H 1.08997 * 109.46661 * 35.52719 * 1 2 3 24 24 H 1.09000 * 109.46827 * 155.52261 * 1 2 3 25 25 H 0.97004 * 119.99663 * 5.09759 * 6 4 3 26 26 H 1.08997 * 109.47516 * 300.00615 * 7 6 4 27 27 H 1.09001 * 109.47148 * 60.00213 * 7 6 4 28 28 H 1.08999 * 113.61677 * 254.53331 * 10 8 7 29 29 H 1.09010 * 113.61066 * 25.43569 * 10 8 7 30 30 H 0.96698 * 114.00379 * 277.60316 * 13 11 10 31 31 H 1.09006 * 113.61430 * 334.56923 * 14 8 7 32 32 H 1.09002 * 113.61375 * 105.39042 * 14 8 7 33 33 H 1.07995 * 126.45400 * 180.25440 * 15 3 2 34 34 H 1.08994 * 109.47429 * 355.21492 * 19 18 16 35 35 H 0.96699 * 113.99480 * 59.99924 * 20 19 18 36 36 H 1.48502 * 110.00184 * 63.68500 * 21 19 18 37 37 H 1.48494 * 110.00134 * 185.00505 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8122 2.5122 -0.0005 5 8 0.6257 2.7646 -0.0980 6 7 2.7075 3.5139 0.1071 7 6 2.2463 4.8998 0.2188 8 6 3.4544 5.8324 0.3265 9 1 4.2065 5.4714 1.0281 10 6 4.0331 6.2506 -1.0356 11 6 4.2202 7.6554 -0.4343 12 1 5.1827 7.7934 0.0584 13 8 3.9029 8.7153 -1.3388 14 6 3.0767 7.3085 0.5336 15 6 3.5782 0.6891 0.0058 16 6 3.5530 -0.7095 -0.0007 17 35 5.0610 -1.8503 -0.0013 18 6 2.2559 -1.1015 -0.0005 19 6 1.7714 -2.5285 -0.0001 20 8 1.0748 -2.7948 1.2189 21 14 0.6228 -2.7947 -1.4425 22 1 -0.3634 0.0989 1.0228 23 1 -0.3632 0.8364 -0.5972 24 1 -0.3633 -0.9353 -0.4258 25 1 3.6574 3.3171 0.1104 26 1 1.6636 5.1613 -0.6644 27 1 1.6250 5.0054 1.1082 28 1 4.9703 5.7523 -1.2834 29 1 3.3067 6.2164 -1.8477 30 1 4.6182 8.9381 -1.9501 31 1 2.0884 7.5642 0.1514 32 1 3.2416 7.6628 1.5512 33 1 4.4583 1.3150 0.0111 34 1 2.6242 -3.2018 -0.0857 35 1 0.3022 -2.2311 1.3616 36 1 1.3584 -2.6076 -2.7189 37 1 0.0439 -4.1610 -1.3855 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12309068_5000100.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:24:50 Heat of formation + Delta-G solvation = -37.634174 kcal Electronic energy + Delta-G solvation = -22195.033150 eV Core-core repulsion = 18601.046432 eV Total energy + Delta-G solvation = -3593.986717 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.041 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -42.89733 -40.78348 -39.85247 -37.90684 -36.62436 -35.25949 -34.35659 -32.32124 -31.03412 -29.16479 -27.37046 -26.74335 -26.55282 -23.62175 -22.90925 -21.65496 -20.91784 -20.25154 -19.08105 -18.42937 -17.97966 -17.32412 -17.14776 -16.70533 -16.44699 -16.05601 -15.90247 -15.57882 -14.95761 -14.75967 -14.59016 -14.41470 -14.34931 -14.22514 -13.72378 -13.50974 -13.40924 -13.21205 -12.93357 -12.62660 -12.41731 -12.39723 -11.94187 -11.83855 -11.37554 -11.26950 -11.11553 -10.84629 -10.69010 -10.22676 -9.81250 -9.30170 -5.21323 0.13436 0.60650 0.90141 1.16156 1.42262 1.52433 1.81226 2.16161 2.25538 3.17428 3.31511 3.40873 3.44663 3.57997 3.64244 3.75126 3.83740 3.89422 4.01873 4.22782 4.25698 4.31469 4.38143 4.40463 4.61661 4.66065 4.71915 4.81026 4.83446 4.86892 5.03314 5.15323 5.23264 5.31727 5.47909 5.55133 5.81712 6.39511 6.43356 6.90870 7.04393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.053 3.947 2 N -0.394 5.394 3 C -0.043 4.043 4 C 0.590 3.410 5 O -0.572 6.572 6 N -0.702 5.702 7 C 0.137 3.863 8 C -0.110 4.110 9 H 0.122 0.878 10 C -0.162 4.162 11 C 0.070 3.930 12 H 0.100 0.900 13 O -0.585 6.585 14 C -0.127 4.127 15 C -0.106 4.106 16 C -0.181 4.181 17 Br -0.028 7.028 18 C 0.048 3.952 19 C -0.054 4.054 20 O -0.541 6.541 21 Si 0.745 3.255 22 H 0.110 0.890 23 H 0.109 0.891 24 H 0.109 0.891 25 H 0.416 0.584 26 H 0.060 0.940 27 H 0.068 0.932 28 H 0.086 0.914 29 H 0.077 0.923 30 H 0.394 0.606 31 H 0.079 0.921 32 H 0.086 0.914 33 H 0.178 0.822 34 H 0.126 0.874 35 H 0.390 0.610 36 H -0.283 1.283 37 H -0.264 1.264 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.934 2.662 0.425 2.853 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 N -0.068 5.068 3 C -0.157 4.157 4 C 0.378 3.622 5 O -0.453 6.453 6 N -0.354 5.354 7 C 0.014 3.986 8 C -0.129 4.129 9 H 0.140 0.860 10 C -0.199 4.199 11 C 0.012 3.988 12 H 0.118 0.882 13 O -0.394 6.394 14 C -0.165 4.165 15 C -0.133 4.133 16 C -0.267 4.267 17 Br 0.056 6.944 18 C -0.074 4.074 19 C -0.164 4.164 20 O -0.347 6.347 21 Si 0.647 3.353 22 H 0.128 0.872 23 H 0.127 0.873 24 H 0.127 0.873 25 H 0.254 0.746 26 H 0.078 0.922 27 H 0.086 0.914 28 H 0.105 0.895 29 H 0.095 0.905 30 H 0.244 0.756 31 H 0.098 0.902 32 H 0.104 0.896 33 H 0.195 0.805 34 H 0.143 0.857 35 H 0.240 0.760 36 H -0.210 1.210 37 H -0.190 1.190 Dipole moment (debyes) X Y Z Total from point charges -0.030 1.565 0.062 1.566 hybrid contribution 1.320 0.019 -0.133 1.327 sum 1.289 1.584 -0.071 2.043 Atomic orbital electron populations 1.22772 0.73760 1.05428 1.06589 1.43891 1.07892 1.03517 1.51456 1.20024 0.90008 0.87706 1.17952 1.16918 0.85476 0.83618 0.76189 1.90811 1.17402 1.85103 1.51987 1.45528 1.10325 1.05932 1.73619 1.21339 0.96580 0.78800 1.01868 1.22525 0.97439 0.93919 0.98981 0.86045 1.23767 1.02250 0.97134 0.96783 1.23514 0.98679 0.85490 0.91159 0.88231 1.86495 1.45937 1.55455 1.51477 1.23078 0.99191 0.94236 1.00001 1.21502 0.95862 0.92720 1.03186 1.20980 0.91395 0.94995 1.19298 1.96657 1.36099 1.63398 1.98251 1.20814 0.89890 0.90193 1.06455 1.24960 1.03094 0.90056 0.98247 1.86593 1.45971 1.62979 1.39199 0.94450 0.83548 0.84047 0.73296 0.87212 0.87256 0.87316 0.74630 0.92153 0.91381 0.89534 0.90468 0.75605 0.90250 0.89578 0.80518 0.85709 0.76024 1.20960 1.18992 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.32 8.94 127.77 1.14 0.82 16 2 N -0.39 0.05 3.10 -519.62 -1.61 -1.56 16 3 C -0.04 -0.06 6.88 40.35 0.28 0.22 16 4 C 0.59 1.39 7.77 86.44 0.67 2.06 16 5 O -0.57 -4.62 14.78 -4.33 -0.06 -4.68 16 6 N -0.70 2.27 5.54 -467.11 -2.59 -0.32 16 7 C 0.14 -0.39 5.50 86.38 0.48 0.09 16 8 C -0.11 0.74 3.75 -10.27 -0.04 0.70 16 9 H 0.12 -1.25 8.14 -2.38 -0.02 -1.27 16 10 C -0.16 0.91 7.48 31.18 0.23 1.14 16 11 C 0.07 -0.28 5.21 31.18 0.16 -0.12 16 12 H 0.10 -0.75 8.14 -2.38 -0.02 -0.77 16 13 O -0.59 -0.10 13.68 -148.98 -2.04 -2.13 16 14 C -0.13 0.46 7.47 31.12 0.23 0.69 16 15 C -0.11 -0.01 10.34 22.59 0.23 0.22 16 16 C -0.18 -0.60 6.53 22.03 0.14 -0.46 16 17 Br -0.03 -0.11 33.06 -20.37 -0.67 -0.78 16 18 C 0.05 0.09 5.29 41.34 0.22 0.31 16 19 C -0.05 -0.03 2.87 71.24 0.20 0.17 16 20 O -0.54 -0.05 12.88 -148.98 -1.92 -1.96 16 21 Si 0.75 -1.22 29.25 68.60 2.01 0.78 16 22 H 0.11 -1.00 8.14 -2.39 -0.02 -1.02 16 23 H 0.11 -0.37 6.53 -2.39 -0.02 -0.39 16 24 H 0.11 -1.26 3.78 -2.39 -0.01 -1.27 16 25 H 0.42 -3.49 7.37 -92.71 -0.68 -4.17 16 26 H 0.06 0.04 7.87 -2.39 -0.02 0.02 16 27 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 28 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 29 H 0.08 -0.16 7.92 -2.38 -0.02 -0.18 16 30 H 0.39 -3.07 9.12 -74.06 -0.68 -3.75 16 31 H 0.08 -0.03 8.10 -2.38 -0.02 -0.05 16 32 H 0.09 -0.44 8.14 -2.39 -0.02 -0.46 16 33 H 0.18 -1.00 7.45 -2.91 -0.02 -1.03 16 34 H 0.13 0.34 6.96 -2.39 -0.02 0.32 16 35 H 0.39 -3.20 7.44 -74.06 -0.55 -3.75 16 36 H -0.28 -1.44 7.11 99.48 0.71 -0.73 16 37 H -0.26 -0.84 7.11 99.48 0.71 -0.13 16 Total: 0.00 -20.61 325.94 -3.66 -24.27 By element: Atomic # 1 Polarization: -18.72 SS G_CDS: -0.73 Total: -19.46 kcal Atomic # 6 Polarization: 1.89 SS G_CDS: 3.96 Total: 5.85 kcal Atomic # 7 Polarization: 2.32 SS G_CDS: -4.20 Total: -1.88 kcal Atomic # 8 Polarization: -4.76 SS G_CDS: -4.02 Total: -8.78 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: 2.01 Total: 0.78 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -0.67 Total: -0.78 kcal Total: -20.61 -3.66 -24.27 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_5000100.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.369 kcal (2) G-P(sol) polarization free energy of solvation -20.605 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.974 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.660 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.265 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.634 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds