Wall clock time and date at job start Tue Mar 9 2021 14:25:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33820 * 122.44577 * 2 1 4 4 C 1.50694 * 124.52207 * 0.02562 * 3 2 1 5 5 O 1.42896 * 109.47383 * 30.00101 * 4 3 2 6 6 Si 1.86302 * 109.47236 * 150.00098 * 4 3 2 7 7 S 1.70617 * 110.95113 * 179.70409 * 3 2 1 8 8 C 1.75823 * 91.56441 * 0.35444 * 7 3 2 9 9 C 1.46586 * 125.45833 * 179.91045 * 8 7 3 10 10 O 1.21700 * 120.00013 * 179.41624 * 9 8 7 11 11 N 1.34777 * 119.99915 * 359.69930 * 9 8 7 12 12 C 1.46496 * 119.99867 * 180.02562 * 11 9 8 13 13 C 1.53002 * 109.47030 * 179.97438 * 12 11 9 14 14 H 1.09005 * 112.84820 * 314.66244 * 13 12 11 15 15 C 1.53781 * 113.61642 * 85.86002 * 13 12 11 16 16 C 1.53954 * 87.01973 * 139.95024 * 15 13 12 17 17 H 1.09005 * 113.61117 * 89.19726 * 16 15 13 18 18 O 1.42898 * 113.67135 * 220.06697 * 16 15 13 19 19 C 1.53783 * 87.11436 * 334.63983 * 16 15 13 20 20 C 1.36648 * 109.08756 * 359.65000 * 8 7 3 21 21 H 1.09002 * 109.46747 * 269.99531 * 1 2 3 22 22 H 1.08997 * 109.47589 * 29.99736 * 1 2 3 23 23 H 1.08998 * 109.46887 * 150.00036 * 1 2 3 24 24 H 1.09003 * 109.47480 * 270.00057 * 4 3 2 25 25 H 0.96701 * 114.00110 * 59.99689 * 5 4 3 26 26 H 1.48503 * 110.00425 * 180.02562 * 6 4 3 27 27 H 1.48508 * 109.99947 * 301.32076 * 6 4 3 28 28 H 0.96999 * 120.00047 * 359.97438 * 11 9 8 29 29 H 1.09004 * 109.47074 * 299.99559 * 12 11 9 30 30 H 1.09004 * 109.47714 * 59.99650 * 12 11 9 31 31 H 1.08998 * 113.61494 * 254.53145 * 15 13 12 32 32 H 1.08998 * 113.61227 * 25.43703 * 15 13 12 33 33 H 0.96700 * 113.99847 * 277.56860 * 18 16 15 34 34 H 1.08995 * 113.61176 * 270.80901 * 19 16 15 35 35 H 1.08999 * 113.69205 * 139.91407 * 19 16 15 36 36 H 1.07996 * 123.35640 * 180.24314 * 20 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1293 0.0000 4 6 1.6354 2.5161 0.0006 5 8 0.3755 2.4979 0.6747 6 14 2.7926 3.6826 0.8786 7 16 3.8969 0.7893 0.0082 8 6 3.5938 -0.9426 0.0008 9 6 4.6232 -1.9861 0.0013 10 8 4.3003 -3.1594 0.0065 11 7 5.9274 -1.6460 0.0017 12 6 6.9562 -2.6889 0.0015 13 6 8.3413 -2.0389 0.0014 14 1 8.4244 -1.2198 -0.7131 15 6 8.8560 -1.6850 1.4067 16 6 10.2390 -2.1693 0.9345 17 1 10.8427 -1.3861 0.4761 18 8 10.9539 -2.9145 1.9223 19 6 9.4965 -3.0504 -0.0840 20 6 2.2447 -1.1601 0.0005 21 1 -0.3633 -0.0001 1.0277 22 1 -0.3634 0.8900 -0.5138 23 1 -0.3633 -0.8900 -0.5138 24 1 1.4928 2.8508 -1.0270 25 1 0.4266 2.2092 1.5961 26 1 2.2224 5.0537 0.8866 27 1 3.0204 3.2196 2.2712 28 1 6.1848 -0.7108 0.0012 29 1 6.8455 -3.3087 0.8914 30 1 6.8459 -3.3083 -0.8886 31 1 8.8184 -0.6188 1.6298 32 1 8.4247 -2.2994 2.1970 33 1 11.4228 -2.3658 2.5658 34 1 9.2408 -4.0386 0.2980 35 1 9.9744 -3.0857 -1.0631 36 1 1.8020 -2.1451 0.0002 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12309068_6739946.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:25:05 Heat of formation + Delta-G solvation = -62.524279 kcal Electronic energy + Delta-G solvation = -19754.983535 eV Core-core repulsion = 16526.087522 eV Total energy + Delta-G solvation = -3228.896014 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 284.091 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.07027 -40.33800 -39.70342 -37.50592 -36.58814 -35.03023 -32.26727 -30.29412 -29.24221 -26.86104 -26.19656 -24.51978 -23.24083 -21.82159 -20.70339 -20.20520 -19.39166 -18.51968 -17.87626 -17.26081 -16.98733 -16.69840 -16.47364 -16.18961 -15.89056 -15.37823 -15.06081 -14.78754 -14.49244 -14.43596 -13.94033 -13.60835 -13.54110 -13.52782 -13.14034 -12.98280 -12.72707 -12.57843 -12.40526 -12.26868 -11.98373 -11.88174 -11.43737 -11.11337 -10.93825 -10.81642 -10.18858 -9.68987 -9.43314 -5.25097 -0.62687 0.27992 0.69105 1.01779 1.32772 1.44798 1.78577 2.01835 2.20130 3.08952 3.13053 3.36128 3.43823 3.50097 3.66998 3.74524 3.83643 4.08491 4.10478 4.21942 4.25117 4.41411 4.55666 4.58265 4.63649 4.70279 4.74656 4.76570 4.84761 4.90328 5.01340 5.02330 5.21907 5.35388 5.36669 5.42529 6.15905 6.35566 6.63785 7.11079 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C -0.095 4.095 3 C -0.236 4.236 4 C -0.032 4.032 5 O -0.517 6.517 6 Si 0.662 3.338 7 S 0.200 5.800 8 C -0.261 4.261 9 C 0.591 3.409 10 O -0.525 6.525 11 N -0.726 5.726 12 C 0.132 3.868 13 C -0.126 4.126 14 H 0.101 0.899 15 C -0.166 4.166 16 C 0.076 3.924 17 H 0.084 0.916 18 O -0.560 6.560 19 C -0.119 4.119 20 C -0.048 4.048 21 H 0.069 0.931 22 H 0.084 0.916 23 H 0.063 0.937 24 H 0.129 0.871 25 H 0.378 0.622 26 H -0.237 1.237 27 H -0.247 1.247 28 H 0.399 0.601 29 H 0.074 0.926 30 H 0.075 0.925 31 H 0.072 0.928 32 H 0.093 0.907 33 H 0.380 0.620 34 H 0.095 0.905 35 H 0.079 0.921 36 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.371 5.004 -0.464 6.051 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.108 4.108 3 C -0.356 4.356 4 C -0.144 4.144 5 O -0.324 6.324 6 Si 0.560 3.440 7 S 0.468 5.532 8 C -0.381 4.381 9 C 0.377 3.623 10 O -0.403 6.403 11 N -0.378 5.378 12 C 0.009 3.991 13 C -0.144 4.144 14 H 0.120 0.880 15 C -0.204 4.204 16 C 0.017 3.983 17 H 0.101 0.899 18 O -0.365 6.365 19 C -0.157 4.157 20 C -0.081 4.081 21 H 0.088 0.912 22 H 0.103 0.897 23 H 0.082 0.918 24 H 0.146 0.854 25 H 0.227 0.773 26 H -0.161 1.161 27 H -0.171 1.171 28 H 0.233 0.767 29 H 0.093 0.907 30 H 0.093 0.907 31 H 0.091 0.909 32 H 0.111 0.889 33 H 0.227 0.773 34 H 0.114 0.886 35 H 0.098 0.902 36 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 4.147 5.310 -0.683 6.772 hybrid contribution -1.779 -0.398 0.954 2.058 sum 2.367 4.912 0.272 5.459 Atomic orbital electron populations 1.20641 0.88688 1.03454 1.02674 1.18715 0.98402 0.90627 1.03025 1.24419 0.98690 1.00709 1.11753 1.24428 0.91212 0.95198 1.03536 1.86640 1.27528 1.89181 1.29058 0.95523 0.84932 0.80025 0.83544 1.82634 1.02987 0.98538 1.69031 1.24607 0.97967 0.96878 1.18607 1.16943 0.81600 0.87411 0.76342 1.90868 1.81608 1.18198 1.49606 1.45830 1.05405 1.10399 1.76122 1.21388 0.84716 0.89850 1.03114 1.22596 0.93412 0.99821 0.98598 0.88049 1.23841 0.97537 1.02054 0.96969 1.23345 0.90597 0.94349 0.90044 0.89864 1.86543 1.69070 1.37279 1.43615 1.23039 0.94577 0.98974 0.99113 1.20725 0.90937 1.00119 0.96351 0.91232 0.89688 0.91765 0.85352 0.77311 1.16065 1.17073 0.76703 0.90730 0.90700 0.90941 0.88895 0.77277 0.88635 0.90215 0.82755 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.04 8.67 36.01 0.31 0.35 16 2 C -0.09 -0.05 5.75 -106.45 -0.61 -0.67 16 3 C -0.24 0.12 5.54 -35.86 -0.20 -0.08 16 4 C -0.03 0.05 2.76 36.00 0.10 0.15 16 5 O -0.52 0.33 9.85 -35.23 -0.35 -0.02 16 6 Si 0.66 -1.30 31.30 -169.99 -5.32 -6.62 16 7 S 0.20 -0.30 19.78 -107.50 -2.13 -2.42 16 8 C -0.26 -0.39 6.45 -36.79 -0.24 -0.63 16 9 C 0.59 1.74 7.78 -12.89 -0.10 1.64 16 10 O -0.53 -3.58 16.84 5.19 0.09 -3.50 16 11 N -0.73 0.10 5.55 -61.65 -0.34 -0.24 16 12 C 0.13 -0.05 5.50 -4.04 -0.02 -0.07 16 13 C -0.13 0.31 3.75 -89.80 -0.34 -0.03 16 14 H 0.10 -0.38 8.14 -51.93 -0.42 -0.80 16 15 C -0.17 0.37 7.48 -25.83 -0.19 0.18 16 16 C 0.08 -0.12 5.21 -25.83 -0.13 -0.25 16 17 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 18 O -0.56 -0.10 13.67 -35.23 -0.48 -0.58 16 19 C -0.12 0.17 7.48 -25.92 -0.19 -0.02 16 20 C -0.05 -0.08 9.80 -40.43 -0.40 -0.48 16 21 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 22 H 0.08 0.01 6.42 -51.93 -0.33 -0.32 16 23 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 24 H 0.13 -0.30 7.96 -51.93 -0.41 -0.71 16 25 H 0.38 -1.12 8.66 45.56 0.39 -0.72 16 26 H -0.24 -0.20 7.11 56.52 0.40 0.21 16 27 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 28 H 0.40 -1.04 7.59 -40.82 -0.31 -1.35 16 29 H 0.07 0.06 7.88 -51.93 -0.41 -0.35 16 30 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 31 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 32 H 0.09 -0.08 7.92 -51.93 -0.41 -0.49 16 33 H 0.38 -1.45 9.12 45.56 0.42 -1.04 16 34 H 0.10 -0.03 8.10 -51.93 -0.42 -0.45 16 35 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 36 H 0.15 0.28 8.06 -52.49 -0.42 -0.15 16 LS Contribution 316.06 15.07 4.76 4.76 Total: 0.00 -7.81 316.06 -9.85 -17.65 By element: Atomic # 1 Polarization: -5.05 SS G_CDS: -4.07 Total: -9.12 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -2.01 Total: 0.08 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -0.34 Total: -0.24 kcal Atomic # 8 Polarization: -3.35 SS G_CDS: -0.74 Total: -4.09 kcal Atomic # 14 Polarization: -1.30 SS G_CDS: -5.32 Total: -6.62 kcal Atomic # 16 Polarization: -0.30 SS G_CDS: -2.13 Total: -2.42 kcal Total LS contribution 4.76 Total: 4.76 kcal Total: -7.81 -9.85 -17.65 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_6739946.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.871 kcal (2) G-P(sol) polarization free energy of solvation -7.806 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.677 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.847 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.653 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.524 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds