Wall clock time and date at job start Tue Mar 9 2021 14:25:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86299 * 109.46773 * 2 1 4 4 C 1.50697 * 109.47307 * 120.00278 * 2 1 3 5 5 C 1.38240 * 119.93871 * 245.02690 * 4 2 1 6 6 C 1.38197 * 120.07552 * 179.76709 * 5 4 2 7 7 C 1.38660 * 119.95584 * 0.45972 * 6 5 4 8 8 O 1.35923 * 120.05870 * 179.79338 * 7 6 5 9 9 C 1.42902 * 117.00054 * 359.72273 * 8 7 6 10 10 C 1.52998 * 109.47042 * 180.02562 * 9 8 7 11 11 N 1.46503 * 109.46810 * 180.02562 * 10 9 8 12 12 C 1.34816 * 126.59327 * 124.97437 * 11 10 9 13 13 C 1.36602 * 106.83847 * 179.97438 * 12 11 10 14 14 C 1.47523 * 125.76914 * 180.26109 * 13 12 11 15 15 O 1.21593 * 119.99812 * 359.71778 * 14 13 12 16 16 N 1.34778 * 119.99695 * 179.71894 * 14 13 12 17 17 C 1.46496 * 119.99759 * 180.02562 * 16 14 13 18 18 C 1.52999 * 109.46891 * 179.97438 * 17 16 14 19 19 H 1.09000 * 112.85212 * 45.33962 * 18 17 16 20 20 C 1.53784 * 113.61323 * 176.52688 * 18 17 16 21 21 C 1.53773 * 87.08114 * 139.98291 * 20 18 17 22 22 H 1.09004 * 113.61733 * 89.20395 * 21 20 18 23 23 O 1.42900 * 113.61835 * 220.01927 * 21 20 18 24 24 C 1.53777 * 113.61992 * 274.13419 * 18 17 16 25 25 N 1.34404 * 108.45542 * 359.97438 * 13 12 11 26 26 N 1.28755 * 109.52541 * 0.02562 * 25 13 12 27 27 C 1.38861 * 119.88151 * 359.51577 * 7 6 5 28 28 Cl 1.73600 * 120.03940 * 180.27381 * 27 7 6 29 29 C 1.38213 * 119.92173 * 0.25321 * 27 7 6 30 30 H 0.96699 * 114.00286 * 299.99363 * 1 2 3 31 31 H 1.09002 * 109.46739 * 240.00333 * 2 1 3 32 32 H 1.48508 * 109.99876 * 178.68041 * 3 2 1 33 33 H 1.48497 * 110.00212 * 300.00135 * 3 2 1 34 34 H 1.08000 * 119.95829 * 359.97438 * 5 4 2 35 35 H 1.08002 * 120.02004 * 180.25438 * 6 5 4 36 36 H 1.08994 * 109.46826 * 59.99820 * 9 8 7 37 37 H 1.09001 * 109.46838 * 299.99830 * 9 8 7 38 38 H 1.08997 * 109.47600 * 59.99509 * 10 9 8 39 39 H 1.09001 * 109.46774 * 299.99391 * 10 9 8 40 40 H 1.07999 * 126.58373 * 0.03979 * 12 11 10 41 41 H 0.96999 * 120.00018 * 359.97438 * 16 14 13 42 42 H 1.08996 * 109.47514 * 299.99896 * 17 16 14 43 43 H 1.09003 * 109.47038 * 59.99991 * 17 16 14 44 44 H 1.08998 * 113.61851 * 254.53394 * 20 18 17 45 45 H 1.09008 * 113.61184 * 25.35086 * 20 18 17 46 46 H 0.96703 * 114.00937 * 179.97438 * 23 21 20 47 47 H 1.09004 * 113.61200 * 334.57410 * 24 18 17 48 48 H 1.09000 * 113.61542 * 105.46705 * 24 18 17 49 49 H 1.08004 * 119.97450 * 179.97438 * 29 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6382 -0.0110 2.1907 6 6 3.0960 -0.6586 3.3224 7 6 2.8544 -2.0136 3.4902 8 8 3.3074 -2.6536 4.6005 9 6 4.0308 -1.8697 5.5514 10 6 4.4570 -2.7555 6.7238 11 7 5.1982 -1.9517 7.6989 12 6 4.9191 -1.8218 9.0115 13 6 5.8624 -0.9842 9.5356 14 6 5.9519 -0.5614 10.9461 15 8 5.1357 -0.9615 11.7537 16 7 6.9385 0.2683 11.3394 17 6 7.0278 0.6878 12.7402 18 6 8.2277 1.6202 12.9178 19 1 8.2934 2.3789 12.1379 20 6 8.3621 2.1870 14.3411 21 6 9.8788 1.9797 14.1959 22 1 10.3976 2.8368 13.7666 23 8 10.5058 1.4891 15.3826 24 6 9.5516 0.8796 13.1698 25 7 6.6987 -0.6155 8.5501 26 7 6.3348 -1.1704 7.4467 27 6 2.1437 -2.7144 2.5248 28 17 1.8327 -4.4094 2.7341 29 6 1.6840 -2.0607 1.3971 30 1 -0.3934 0.4416 0.7651 31 1 1.7923 -0.5138 -0.8900 32 1 3.5345 1.7704 0.0321 33 1 1.5613 2.4679 -1.2084 34 1 2.8299 1.0435 2.0579 35 1 3.6446 -0.1104 4.0740 36 1 3.3946 -1.0637 5.9170 37 1 4.9157 -1.4469 5.0756 38 1 5.0933 -3.5614 6.3579 39 1 3.5724 -3.1787 7.1997 40 1 4.1065 -2.2909 9.5462 41 1 7.5898 0.5872 10.6952 42 1 6.1147 1.2125 13.0214 43 1 7.1528 -0.1896 13.3749 44 1 8.0704 3.2340 14.4235 45 1 7.9054 1.5589 15.1061 46 1 11.4598 1.3562 15.2974 47 1 9.4221 -0.1073 13.6141 48 1 10.2189 0.8725 12.3080 49 1 1.1315 -2.6050 0.6454 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12309068_7143556.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:25:10 Heat of formation + Delta-G solvation = -0.586793 kcal Electronic energy + Delta-G solvation = -34070.655433 eV Core-core repulsion = 29029.241988 eV Total energy + Delta-G solvation = -5041.413445 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 409.128 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -43.41206 -41.65282 -40.85481 -39.90680 -39.58291 -37.79454 -37.17402 -36.59666 -36.27611 -34.96380 -32.65086 -32.17048 -32.06923 -30.93466 -28.89697 -26.85515 -26.80017 -25.92767 -24.83815 -24.06803 -23.14719 -22.95922 -22.56960 -21.55898 -20.60308 -19.93824 -19.15550 -18.57706 -18.38138 -17.89021 -17.55060 -17.30279 -17.17312 -17.06782 -16.80345 -16.51493 -16.17405 -16.04163 -16.01773 -15.69503 -15.51751 -15.20112 -15.14870 -14.97233 -14.77387 -14.61100 -14.52197 -13.97241 -13.81022 -13.66119 -13.51271 -13.47255 -13.26820 -12.72383 -12.64811 -12.61995 -12.53897 -12.42160 -12.25878 -12.21079 -12.10921 -11.94347 -11.80012 -11.62682 -11.39778 -11.19717 -10.78850 -10.58063 -10.50988 -10.12852 -10.05714 -9.45066 -5.15786 -0.13748 -0.08058 -0.03869 0.54112 0.58503 1.01080 1.21751 1.52179 1.79256 1.88168 2.04922 2.24693 2.26689 2.95919 3.05453 3.16695 3.18396 3.31146 3.39406 3.44431 3.48064 3.53920 3.56742 3.60060 3.68092 3.71151 3.76483 3.84614 3.87137 3.92946 4.11018 4.12281 4.18479 4.25107 4.26625 4.38198 4.49094 4.56837 4.63697 4.68965 4.69783 4.73977 4.80658 4.83928 4.92325 5.05932 5.06495 5.09791 5.26746 5.31463 5.40603 5.84986 6.37510 6.45566 6.66564 6.77379 7.13646 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.064 4.064 3 Si 0.685 3.315 4 C -0.142 4.142 5 C -0.069 4.069 6 C -0.190 4.190 7 C 0.145 3.855 8 O -0.298 6.298 9 C 0.046 3.954 10 C 0.126 3.874 11 N -0.361 5.361 12 C 0.105 3.895 13 C -0.103 4.103 14 C 0.606 3.394 15 O -0.535 6.535 16 N -0.714 5.714 17 C 0.132 3.868 18 C -0.125 4.125 19 H 0.101 0.899 20 C -0.119 4.119 21 C 0.075 3.925 22 H 0.083 0.917 23 O -0.560 6.560 24 C -0.166 4.166 25 N -0.200 5.200 26 N -0.059 5.059 27 C -0.065 4.065 28 Cl -0.049 7.049 29 C -0.045 4.045 30 H 0.380 0.620 31 H 0.116 0.884 32 H -0.256 1.256 33 H -0.252 1.252 34 H 0.137 0.863 35 H 0.142 0.858 36 H 0.076 0.924 37 H 0.085 0.915 38 H 0.116 0.884 39 H 0.122 0.878 40 H 0.209 0.791 41 H 0.409 0.591 42 H 0.075 0.925 43 H 0.074 0.926 44 H 0.079 0.921 45 H 0.095 0.905 46 H 0.380 0.620 47 H 0.092 0.908 48 H 0.072 0.928 49 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.396 3.024 0.039 3.050 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.175 4.175 3 Si 0.587 3.413 4 C -0.143 4.143 5 C -0.087 4.087 6 C -0.209 4.209 7 C 0.098 3.902 8 O -0.210 6.210 9 C -0.030 4.030 10 C 0.004 3.996 11 N -0.147 5.147 12 C -0.051 4.051 13 C -0.242 4.242 14 C 0.389 3.611 15 O -0.411 6.411 16 N -0.365 5.365 17 C 0.009 3.991 18 C -0.144 4.144 19 H 0.120 0.880 20 C -0.157 4.157 21 C 0.016 3.984 22 H 0.101 0.899 23 O -0.365 6.365 24 C -0.204 4.204 25 N -0.075 5.075 26 N -0.039 5.039 27 C -0.093 4.093 28 Cl -0.020 7.020 29 C -0.063 4.063 30 H 0.227 0.773 31 H 0.134 0.866 32 H -0.181 1.181 33 H -0.176 1.176 34 H 0.154 0.846 35 H 0.159 0.841 36 H 0.095 0.905 37 H 0.104 0.896 38 H 0.134 0.866 39 H 0.140 0.860 40 H 0.226 0.774 41 H 0.245 0.755 42 H 0.093 0.907 43 H 0.093 0.907 44 H 0.097 0.903 45 H 0.114 0.886 46 H 0.227 0.773 47 H 0.111 0.889 48 H 0.091 0.909 49 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 0.693 3.137 -1.131 3.406 hybrid contribution 0.324 -0.908 -0.091 0.968 sum 1.017 2.229 -1.222 2.738 Atomic orbital electron populations 1.86528 1.16880 1.81670 1.49273 1.25016 0.85398 1.10023 0.97030 0.94858 0.81090 0.77730 0.87650 1.20245 1.01845 0.94186 0.98050 1.20908 0.95658 0.99542 0.92592 1.21182 1.06039 0.92780 1.00882 1.18559 0.94428 0.90721 0.86450 1.86023 1.68773 1.37378 1.28871 1.22922 0.97268 0.93875 0.88954 1.21670 0.97559 0.92255 0.88100 1.50237 1.22162 1.34695 1.07604 1.23469 1.00230 0.97235 0.84189 1.21437 0.99102 1.07640 0.95994 1.16705 0.81262 0.78531 0.84552 1.90851 1.41069 1.56299 1.52863 1.45742 1.30698 1.48577 1.11481 1.21398 0.98183 0.98058 0.81471 1.22584 0.94597 0.98588 0.98595 0.88040 1.23040 0.94378 1.02245 0.96029 1.23350 0.93830 0.95646 0.85561 0.89905 1.86536 1.26134 1.87795 1.36083 1.23832 0.96929 0.99738 0.99860 1.74642 1.20636 1.15618 0.96568 1.82049 0.98102 1.07217 1.16556 1.20230 1.05344 0.87105 0.96590 1.98399 1.94464 1.11912 1.97195 1.20821 0.96680 0.93676 0.95164 0.77277 0.86634 1.18078 1.17640 0.84572 0.84063 0.90547 0.89643 0.86610 0.85978 0.77395 0.75535 0.90703 0.90738 0.90271 0.88630 0.77289 0.88910 0.90936 0.83687 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.45 12.83 -35.23 -0.45 -0.01 16 2 C -0.06 0.09 2.80 36.00 0.10 0.19 16 3 Si 0.69 -1.46 29.80 -169.99 -5.07 -6.53 16 4 C -0.14 0.16 5.35 -104.61 -0.56 -0.40 16 5 C -0.07 0.14 8.66 -39.60 -0.34 -0.20 16 6 C -0.19 0.32 9.04 -39.44 -0.36 -0.03 16 7 C 0.14 -0.03 6.68 -39.20 -0.26 -0.29 16 8 O -0.30 0.30 9.60 -19.50 -0.19 0.11 16 9 C 0.05 -0.15 4.95 37.16 0.18 0.03 16 10 C 0.13 -0.53 6.91 -4.04 -0.03 -0.56 16 11 N -0.36 0.58 3.69 -61.06 -0.23 0.36 16 12 C 0.11 -0.14 11.27 -16.83 -0.19 -0.33 16 13 C -0.10 -0.11 6.99 -83.55 -0.58 -0.69 16 14 C 0.61 1.28 7.82 -12.47 -0.10 1.19 16 15 O -0.54 -2.62 16.86 5.28 0.09 -2.53 16 16 N -0.71 -0.05 5.55 -61.36 -0.34 -0.39 16 17 C 0.13 -0.06 5.50 -4.04 -0.02 -0.09 16 18 C -0.12 0.26 3.75 -89.81 -0.34 -0.08 16 19 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 20 C -0.12 0.14 7.48 -25.92 -0.19 -0.05 16 21 C 0.08 -0.09 5.21 -25.83 -0.13 -0.22 16 22 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 23 O -0.56 -0.26 13.67 -35.23 -0.48 -0.75 16 24 C -0.17 0.27 7.48 -25.83 -0.19 0.08 16 25 N -0.20 -0.36 12.04 32.85 0.40 0.03 16 26 N -0.06 -0.07 13.65 60.35 0.82 0.75 16 27 C -0.07 -0.04 6.33 -39.36 -0.25 -0.29 16 28 Cl -0.05 -0.06 28.51 -51.86 -1.48 -1.54 16 29 C -0.04 0.00 9.46 -39.57 -0.37 -0.37 16 30 H 0.38 -1.78 8.70 45.56 0.40 -1.38 16 31 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 32 H -0.26 -0.06 7.11 56.52 0.40 0.35 16 33 H -0.25 -0.34 7.11 56.52 0.40 0.07 16 34 H 0.14 -0.56 4.90 -52.49 -0.26 -0.81 16 35 H 0.14 -0.50 6.30 -52.49 -0.33 -0.83 16 36 H 0.08 -0.31 7.65 -51.93 -0.40 -0.70 16 37 H 0.09 -0.25 7.67 -51.93 -0.40 -0.65 16 38 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 39 H 0.12 -0.78 8.08 -51.93 -0.42 -1.20 16 40 H 0.21 -0.87 8.06 -52.49 -0.42 -1.30 16 41 H 0.41 -0.48 8.16 -40.82 -0.33 -0.82 16 42 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 43 H 0.07 0.04 7.87 -51.93 -0.41 -0.37 16 44 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 45 H 0.10 -0.03 8.10 -51.92 -0.42 -0.45 16 46 H 0.38 -1.31 9.12 45.56 0.42 -0.90 16 47 H 0.09 -0.05 7.92 -51.93 -0.41 -0.46 16 48 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 49 H 0.15 -0.07 8.06 -52.48 -0.42 -0.49 16 LS Contribution 433.49 15.07 6.53 6.53 Total: 0.00 -10.86 433.49 -9.59 -20.45 By element: Atomic # 1 Polarization: -8.82 SS G_CDS: -5.56 Total: -14.37 kcal Atomic # 6 Polarization: 1.52 SS G_CDS: -3.64 Total: -2.12 kcal Atomic # 7 Polarization: 0.09 SS G_CDS: 0.65 Total: 0.75 kcal Atomic # 8 Polarization: -2.14 SS G_CDS: -1.03 Total: -3.17 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: -5.07 Total: -6.53 kcal Atomic # 17 Polarization: -0.06 SS G_CDS: -1.48 Total: -1.54 kcal Total LS contribution 6.53 Total: 6.53 kcal Total: -10.86 -9.59 -20.45 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_7143556.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 19.865 kcal (2) G-P(sol) polarization free energy of solvation -10.864 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.001 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.588 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.451 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.587 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds