Wall clock time and date at job start Tue Mar 9 2021 14:25:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86298 * 109.47605 * 2 1 4 4 C 1.50699 * 109.47249 * 239.99737 * 2 1 3 5 5 C 1.34245 * 126.49937 * 105.02708 * 4 2 1 6 6 N 1.36834 * 109.93974 * 179.97438 * 5 4 2 7 7 C 1.46496 * 125.06401 * 179.97438 * 6 5 4 8 8 C 1.50701 * 109.47065 * 264.97809 * 7 6 5 9 9 O 1.21283 * 120.00192 * 359.97438 * 8 7 6 10 10 N 1.34778 * 119.99464 * 180.02562 * 8 7 6 11 11 C 1.46506 * 119.99411 * 179.97438 * 10 8 7 12 12 C 1.53000 * 109.46704 * 179.97438 * 11 10 8 13 13 H 1.08999 * 112.85112 * 45.33489 * 12 11 10 14 14 C 1.53780 * 113.61191 * 176.52994 * 12 11 10 15 15 C 1.53784 * 87.08219 * 139.98307 * 14 12 11 16 16 H 1.08994 * 113.61614 * 89.11639 * 15 14 12 17 17 O 1.42900 * 113.61379 * 219.93733 * 15 14 12 18 18 C 1.53789 * 113.61547 * 274.13556 * 12 11 10 19 19 C 1.37696 * 109.87271 * 0.02562 * 6 5 4 20 20 C 1.39079 * 133.51119 * 180.02562 * 19 6 5 21 21 C 1.37795 * 119.77908 * 179.97438 * 20 19 6 22 22 C 1.38786 * 120.66208 * 359.97438 * 21 20 19 23 23 C 1.36656 * 120.53376 * 0.02562 * 22 21 20 24 24 C 1.39600 * 119.76026 * 359.67678 * 23 22 21 25 25 H 0.96703 * 114.00176 * 60.00012 * 1 2 3 26 26 H 1.09004 * 109.47449 * 120.00278 * 2 1 3 27 27 H 1.48506 * 109.99834 * 298.68369 * 3 2 1 28 28 H 1.48502 * 110.00011 * 59.99633 * 3 2 1 29 29 H 1.07994 * 125.02875 * 0.02562 * 5 4 2 30 30 H 1.09004 * 109.46873 * 24.97780 * 7 6 5 31 31 H 1.09006 * 109.46975 * 144.97583 * 7 6 5 32 32 H 0.96994 * 120.00652 * 359.97438 * 10 8 7 33 33 H 1.08991 * 109.47346 * 299.99863 * 11 10 8 34 34 H 1.09005 * 109.46962 * 60.00333 * 11 10 8 35 35 H 1.08998 * 113.61973 * 254.53375 * 14 12 11 36 36 H 1.09008 * 113.61447 * 25.43716 * 14 12 11 37 37 H 0.96701 * 113.99751 * 179.97438 * 17 15 14 38 38 H 1.08998 * 113.61359 * 334.57421 * 18 12 11 39 39 H 1.08997 * 113.60881 * 105.47254 * 18 12 11 40 40 H 1.08006 * 120.11001 * 359.93028 * 20 19 6 41 41 H 1.08004 * 119.66509 * 179.97438 * 21 20 19 42 42 H 1.08003 * 119.73055 * 180.02562 * 22 21 20 43 43 H 1.07997 * 120.11905 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.4613 -0.1377 -2.3228 6 7 2.8037 -1.0991 -3.2342 7 6 3.4085 -0.8405 -4.5432 8 6 2.3290 -0.7851 -5.5933 9 8 1.1686 -0.9462 -5.2792 10 7 2.6531 -0.5575 -6.8815 11 6 1.6037 -0.5042 -7.9024 12 6 2.2354 -0.2340 -9.2695 13 1 3.1183 -0.8454 -9.4560 14 6 1.2241 -0.2426 -10.4279 15 6 1.9950 0.9560 -11.0059 16 1 2.8128 0.6711 -11.6678 17 8 1.1506 1.9622 -11.5685 18 6 2.4469 1.2602 -9.5659 19 6 2.4940 -2.3458 -2.7383 20 6 2.6295 -3.6362 -3.2390 21 6 2.2151 -4.7108 -2.4824 22 6 1.6635 -4.5193 -1.2234 23 6 1.5211 -3.2600 -0.7120 24 6 1.9399 -2.1574 -1.4588 25 1 -0.3934 0.4417 -0.7651 26 1 1.7923 -0.5139 0.8900 27 1 1.5879 2.4585 -1.2243 28 1 1.5615 2.4679 1.2085 29 1 2.5979 0.9246 -2.4612 30 1 3.9388 0.1115 -4.5167 31 1 4.1091 -1.6401 -4.7841 32 1 3.5811 -0.4290 -7.1328 33 1 1.0735 -1.4561 -7.9285 34 1 0.9031 0.2955 -7.6619 35 1 1.2785 -1.1371 -11.0484 36 1 0.2066 -0.0004 -10.1210 37 1 1.6297 2.7188 -11.9334 38 1 1.7644 1.9139 -9.0229 39 1 3.4871 1.5770 -9.4915 40 1 3.0573 -3.7955 -4.2178 41 1 2.3208 -5.7121 -2.8732 42 1 1.3442 -5.3724 -0.6431 43 1 1.0905 -3.1187 0.2683 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12309068_9818708.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:25:15 Heat of formation + Delta-G solvation = -18.986929 kcal Electronic energy + Delta-G solvation = -26019.348542 eV Core-core repulsion = 22225.772392 eV Total energy + Delta-G solvation = -3793.576150 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -42.47655 -41.02324 -40.11348 -38.02163 -37.60845 -36.68562 -35.14560 -34.04301 -31.49810 -30.13024 -29.78211 -28.13572 -26.93295 -25.64801 -23.79935 -23.40336 -22.54715 -21.80920 -20.74090 -20.53645 -18.99287 -18.48865 -18.24352 -17.73334 -17.35942 -16.85954 -16.67012 -16.35630 -16.29185 -16.02073 -15.61802 -15.37589 -15.18675 -14.92888 -14.68484 -14.57713 -14.28175 -13.99806 -13.88784 -13.63034 -13.46700 -13.20502 -12.80582 -12.66494 -12.59475 -12.44435 -12.26104 -12.07154 -11.87719 -11.62227 -11.52291 -11.14935 -10.89503 -10.41890 -10.33903 -10.26908 -9.02034 -8.52805 -4.90786 0.28217 0.80142 1.37199 1.38941 1.43770 1.63419 1.72071 2.03235 2.10897 3.05266 3.11359 3.25633 3.34325 3.48663 3.51334 3.58795 3.60908 3.73220 3.75799 3.81023 3.86451 3.99596 4.08298 4.12993 4.31958 4.37735 4.48702 4.54379 4.59663 4.61594 4.68324 4.72776 4.79280 4.81270 4.91061 4.93207 5.00067 5.12406 5.25182 5.26367 5.65210 5.81472 5.86976 5.90581 6.13975 6.31097 6.37027 6.57235 6.62143 6.99141 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.037 4.037 3 Si 0.682 3.318 4 C -0.193 4.193 5 C 0.066 3.934 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.489 3.511 9 O -0.514 6.514 10 N -0.727 5.727 11 C 0.132 3.868 12 C -0.124 4.124 13 H 0.101 0.899 14 C -0.120 4.120 15 C 0.076 3.924 16 H 0.083 0.917 17 O -0.559 6.559 18 C -0.165 4.165 19 C 0.109 3.891 20 C -0.128 4.128 21 C -0.096 4.096 22 C -0.146 4.146 23 C -0.065 4.065 24 C -0.086 4.086 25 H 0.374 0.626 26 H 0.114 0.886 27 H -0.261 1.261 28 H -0.256 1.256 29 H 0.168 0.832 30 H 0.123 0.877 31 H 0.118 0.882 32 H 0.402 0.598 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.079 0.921 36 H 0.095 0.905 37 H 0.380 0.620 38 H 0.092 0.908 39 H 0.071 0.929 40 H 0.114 0.886 41 H 0.125 0.875 42 H 0.123 0.877 43 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.280 1.495 -4.531 9.556 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.147 4.147 3 Si 0.583 3.417 4 C -0.201 4.201 5 C -0.059 4.059 6 N -0.149 5.149 7 C -0.034 4.034 8 C 0.272 3.728 9 O -0.388 6.388 10 N -0.381 5.381 11 C 0.009 3.991 12 C -0.143 4.143 13 H 0.119 0.881 14 C -0.158 4.158 15 C 0.017 3.983 16 H 0.101 0.899 17 O -0.365 6.365 18 C -0.203 4.203 19 C 0.005 3.995 20 C -0.149 4.149 21 C -0.116 4.116 22 C -0.165 4.165 23 C -0.083 4.083 24 C -0.091 4.091 25 H 0.222 0.778 26 H 0.132 0.868 27 H -0.186 1.186 28 H -0.181 1.181 29 H 0.185 0.815 30 H 0.141 0.859 31 H 0.136 0.864 32 H 0.236 0.764 33 H 0.090 0.910 34 H 0.090 0.910 35 H 0.098 0.902 36 H 0.113 0.887 37 H 0.228 0.772 38 H 0.110 0.890 39 H 0.090 0.910 40 H 0.132 0.868 41 H 0.143 0.857 42 H 0.141 0.859 43 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 6.960 1.578 -3.840 8.104 hybrid contribution -0.128 0.272 -1.128 1.167 sum 6.832 1.850 -4.968 8.647 Atomic orbital electron populations 1.86591 1.18077 1.79937 1.49045 1.24290 0.83404 1.09747 0.97295 0.95364 0.91426 0.74530 0.80338 1.20585 1.09439 0.92337 0.97704 1.21582 1.01123 0.93939 0.89236 1.43203 1.53814 1.04650 1.13240 1.21588 0.94527 1.06006 0.81313 1.21043 0.90835 0.77328 0.83563 1.90823 1.19971 1.47222 1.80820 1.45939 1.11191 1.73915 1.07043 1.21355 0.89903 1.02642 0.85200 1.22579 1.00016 0.97687 0.93992 0.88109 1.23047 0.99494 0.97470 0.95792 1.23339 0.93247 0.89487 0.92269 0.89873 1.86547 1.36777 1.33257 1.79898 1.23832 1.02288 0.96102 0.98092 1.18169 1.01445 0.85836 0.94085 1.19953 1.05335 0.89277 1.00298 1.20828 0.98335 0.97942 0.94454 1.20671 1.02426 0.96957 0.96436 1.20311 0.97763 0.90922 0.99322 1.18942 1.03220 0.92784 0.94109 0.77823 0.86821 1.18628 1.18099 0.81465 0.85906 0.86360 0.76373 0.90973 0.91012 0.90223 0.88671 0.77233 0.88977 0.90986 0.86770 0.85729 0.85918 0.85897 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.87 12.88 -35.23 -0.45 -2.33 16 2 C -0.04 -0.06 3.06 36.01 0.11 0.05 16 3 Si 0.68 -0.19 30.82 -169.99 -5.24 -5.43 16 4 C -0.19 -0.50 5.58 -102.71 -0.57 -1.07 16 5 C 0.07 0.08 9.89 -16.73 -0.17 -0.09 16 6 N -0.47 -0.66 2.27 -115.71 -0.26 -0.92 16 7 C 0.09 -0.22 6.48 -5.20 -0.03 -0.26 16 8 C 0.49 0.16 7.90 -10.98 -0.09 0.07 16 9 O -0.51 -2.98 16.42 5.55 0.09 -2.89 16 10 N -0.73 1.88 5.56 -60.29 -0.33 1.54 16 11 C 0.13 -0.18 5.50 -4.04 -0.02 -0.20 16 12 C -0.12 0.40 3.75 -89.80 -0.34 0.07 16 13 H 0.10 -0.46 8.14 -51.93 -0.42 -0.88 16 14 C -0.12 0.21 7.47 -25.92 -0.19 0.01 16 15 C 0.08 -0.15 5.21 -25.82 -0.13 -0.28 16 16 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 17 O -0.56 0.05 13.68 -35.23 -0.48 -0.44 16 18 C -0.17 0.48 7.48 -25.82 -0.19 0.29 16 19 C 0.11 0.39 6.80 -83.99 -0.57 -0.18 16 20 C -0.13 -0.34 10.00 -39.43 -0.39 -0.74 16 21 C -0.10 -0.22 10.01 -39.54 -0.40 -0.62 16 22 C -0.15 -0.40 9.97 -39.95 -0.40 -0.80 16 23 C -0.06 -0.24 10.05 -39.65 -0.40 -0.64 16 24 C -0.09 -0.37 6.35 -105.13 -0.67 -1.04 16 25 H 0.37 0.44 8.70 45.56 0.40 0.83 16 26 H 0.11 0.11 7.96 -51.93 -0.41 -0.30 16 27 H -0.26 -0.35 7.00 56.52 0.40 0.05 16 28 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 29 H 0.17 -0.25 6.27 -52.49 -0.33 -0.58 16 30 H 0.12 -0.71 8.12 -51.93 -0.42 -1.13 16 31 H 0.12 -0.55 8.14 -51.93 -0.42 -0.98 16 32 H 0.40 -2.35 8.47 -40.82 -0.35 -2.70 16 33 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 34 H 0.07 0.02 7.87 -51.93 -0.41 -0.39 16 35 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 36 H 0.09 -0.04 8.10 -51.92 -0.42 -0.46 16 37 H 0.38 -1.56 9.12 45.56 0.42 -1.14 16 38 H 0.09 -0.14 7.92 -51.93 -0.41 -0.55 16 39 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 40 H 0.11 0.08 8.06 -52.48 -0.42 -0.34 16 41 H 0.12 0.01 8.06 -52.48 -0.42 -0.41 16 42 H 0.12 0.10 8.06 -52.48 -0.42 -0.33 16 43 H 0.12 0.34 8.06 -52.49 -0.42 -0.08 16 LS Contribution 364.84 15.07 5.50 5.50 Total: 0.00 -11.57 364.84 -11.01 -22.57 By element: Atomic # 1 Polarization: -6.82 SS G_CDS: -5.37 Total: -12.19 kcal Atomic # 6 Polarization: -0.97 SS G_CDS: -4.45 Total: -5.42 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -0.60 Total: 0.62 kcal Atomic # 8 Polarization: -4.81 SS G_CDS: -0.84 Total: -5.66 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: -5.24 Total: -5.43 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -11.57 -11.01 -22.57 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12309068_9818708.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.586 kcal (2) G-P(sol) polarization free energy of solvation -11.566 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.980 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.007 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.573 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.987 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds