Wall clock time and date at job start Tue Mar 9 2021 12:51:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.34777 * 120.00075 * 2 1 4 4 O 1.21283 * 120.00277 * 180.02562 * 3 2 1 5 5 C 1.50703 * 120.00182 * 359.97438 * 3 2 1 6 6 C 1.52992 * 109.47449 * 179.97438 * 5 3 2 7 7 O 1.42904 * 109.47095 * 180.02562 * 6 5 3 8 8 C 1.35900 * 116.99834 * 180.02562 * 7 6 5 9 9 C 1.38713 * 120.05754 * 179.97438 * 8 7 6 10 10 C 1.38159 * 119.94601 * 180.02562 * 9 8 7 11 11 C 1.50707 * 119.97004 * 180.02562 * 10 9 8 12 12 O 1.42894 * 109.47159 * 64.99818 * 11 10 9 13 13 Si 1.86304 * 109.46894 * 184.99743 * 11 10 9 14 14 C 1.38240 * 120.05700 * 359.97438 * 10 9 8 15 15 C 1.38289 * 120.11050 * 359.97438 * 14 10 9 16 16 C 1.38116 * 120.05427 * 359.76976 * 15 14 10 17 17 C 1.46501 * 120.00340 * 180.02562 * 2 1 3 18 18 H 1.08997 * 112.90949 * 174.85851 * 17 2 1 19 19 C 1.53783 * 113.60979 * 306.10715 * 17 2 1 20 20 C 1.53785 * 87.17198 * 140.02322 * 19 17 2 21 21 H 1.08994 * 113.61431 * 89.07078 * 20 19 17 22 22 C 1.50703 * 113.61345 * 219.89263 * 20 19 17 23 23 N 1.34777 * 119.99992 * 179.97438 * 22 20 19 24 24 O 1.21275 * 119.99955 * 0.02562 * 22 20 19 25 25 C 1.53786 * 87.07983 * 334.52367 * 20 19 17 26 26 H 1.08998 * 109.47045 * 274.16986 * 1 2 3 27 27 H 1.09003 * 109.47258 * 34.16814 * 1 2 3 28 28 H 1.09000 * 109.47147 * 154.16722 * 1 2 3 29 29 H 1.09001 * 109.47213 * 300.00758 * 5 3 2 30 30 H 1.09003 * 109.46733 * 59.99901 * 5 3 2 31 31 H 1.09001 * 109.47609 * 300.00610 * 6 5 3 32 32 H 1.09008 * 109.46862 * 60.00645 * 6 5 3 33 33 H 1.08000 * 120.02065 * 0.02836 * 9 8 7 34 34 H 1.09002 * 109.46826 * 304.99400 * 11 10 9 35 35 H 0.96694 * 114.00305 * 60.00443 * 12 11 10 36 36 H 1.48498 * 109.99894 * 58.68019 * 13 11 10 37 37 H 1.48498 * 109.99898 * 179.97438 * 13 11 10 38 38 H 1.07999 * 119.94589 * 179.97438 * 14 10 9 39 39 H 1.08007 * 119.97145 * 180.02562 * 15 14 10 40 40 H 1.08003 * 120.02671 * 180.27795 * 16 15 14 41 41 H 1.08999 * 113.61858 * 25.43328 * 19 17 2 42 42 H 1.09000 * 113.61403 * 254.60873 * 19 17 2 43 43 H 0.97000 * 119.99812 * 0.02562 * 23 22 20 44 44 H 0.97001 * 119.99925 * 180.02562 * 23 22 20 45 45 H 1.09001 * 113.61452 * 139.98170 * 25 20 19 46 46 H 1.08996 * 113.61576 * 270.80309 * 25 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1388 1.1672 0.0000 4 8 3.3517 1.1672 -0.0005 5 6 1.3854 2.4724 -0.0006 6 6 2.3795 3.6352 0.0002 7 8 1.6650 4.8728 0.0002 8 6 2.4052 6.0125 0.0003 9 6 1.7767 7.2491 -0.0001 10 6 2.5314 8.4064 -0.0006 11 6 1.8492 9.7501 -0.0005 12 8 1.1263 9.9172 1.2207 13 14 3.1283 11.0960 -0.1541 14 6 3.9119 8.3327 0.0000 15 6 4.5409 7.1011 0.0016 16 6 3.7909 5.9414 0.0074 17 6 2.1975 -1.2687 -0.0006 18 1 3.2756 -1.1361 -0.0905 19 6 1.7864 -2.2178 1.1374 20 6 1.8961 -3.3643 0.1184 21 1 2.8920 -3.8035 0.0609 22 6 0.8075 -4.3978 0.2529 23 7 0.7799 -5.4594 -0.5770 24 8 -0.0442 -4.2737 1.1072 25 6 1.6213 -2.3158 -0.9726 26 1 -0.3633 0.0747 1.0249 27 1 -0.3634 0.8503 -0.5772 28 1 -0.3633 -0.9250 -0.4478 29 1 0.7589 2.5299 -0.8908 30 1 0.7584 2.5303 0.8892 31 1 3.0056 3.5775 0.8906 32 1 3.0068 3.5775 -0.8894 33 1 0.6983 7.3071 -0.0001 34 1 1.1589 9.8071 -0.8422 35 1 1.6786 9.8778 2.0133 36 1 3.9083 10.9149 -1.4047 37 1 2.4682 12.4262 -0.1559 38 1 4.5001 9.2384 -0.0007 39 1 5.6195 7.0462 0.0025 40 1 4.2826 4.9798 0.0131 41 1 0.7720 -2.0514 1.4999 42 1 2.5190 -2.2775 1.9423 43 1 1.4610 -5.5584 -1.2606 44 1 0.0790 -6.1244 -0.4907 45 1 2.2216 -2.4538 -1.8719 46 1 0.5619 -2.1771 -1.1880 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12311536_4549614.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:51:45 Heat of formation + Delta-G solvation = -87.544910 kcal Electronic energy + Delta-G solvation = -27869.541098 eV Core-core repulsion = 23726.998381 eV Total energy + Delta-G solvation = -4142.542717 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.161 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.86780 -41.31132 -40.57147 -39.19324 -38.58524 -37.26181 -35.63395 -34.59687 -33.22836 -32.47032 -30.85754 -28.36427 -27.47541 -26.87641 -26.75838 -25.20525 -23.68597 -22.50088 -21.80831 -20.52929 -20.06833 -19.34748 -18.71964 -18.04815 -17.87925 -17.68283 -17.58050 -17.10431 -16.90124 -16.73047 -16.49961 -16.31800 -16.06563 -15.43232 -15.32789 -14.98588 -14.84846 -14.58034 -14.42419 -14.25696 -14.18824 -13.92079 -13.60836 -13.38667 -13.18688 -12.99586 -12.89402 -12.82628 -12.42543 -12.29082 -12.13584 -12.04175 -11.82600 -11.67557 -11.63367 -11.08873 -10.87856 -10.67432 -10.48352 -9.95344 -9.74165 -9.28252 -4.97877 0.19018 0.38201 1.30007 1.41274 1.54383 1.62772 1.66633 1.96997 2.28260 2.65421 2.65824 3.29548 3.42004 3.48453 3.50768 3.66272 3.69556 3.76736 3.83688 3.85314 3.88415 4.08573 4.12831 4.22641 4.25164 4.26610 4.34477 4.48279 4.51249 4.53435 4.60351 4.62892 4.65240 4.68088 4.73165 4.83072 4.91959 4.95399 4.96826 5.17444 5.25026 5.37149 5.43074 5.47092 5.69738 5.86987 6.22839 6.32419 6.45273 6.75999 6.97420 7.32491 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.063 3.937 2 N -0.600 5.600 3 C 0.520 3.480 4 O -0.579 6.579 5 C -0.133 4.133 6 C 0.076 3.924 7 O -0.325 6.325 8 C 0.116 3.884 9 C -0.143 4.143 10 C -0.085 4.085 11 C -0.079 4.079 12 O -0.555 6.555 13 Si 0.785 3.215 14 C -0.155 4.155 15 C -0.075 4.075 16 C -0.211 4.211 17 C 0.116 3.884 18 H 0.117 0.883 19 C -0.132 4.132 20 C -0.129 4.129 21 H 0.143 0.857 22 C 0.524 3.476 23 N -0.837 5.837 24 O -0.593 6.593 25 C -0.121 4.121 26 H 0.066 0.934 27 H 0.095 0.905 28 H 0.084 0.916 29 H 0.126 0.874 30 H 0.121 0.879 31 H 0.066 0.934 32 H 0.066 0.934 33 H 0.126 0.874 34 H 0.106 0.894 35 H 0.396 0.604 36 H -0.285 1.285 37 H -0.298 1.298 38 H 0.151 0.849 39 H 0.155 0.845 40 H 0.137 0.863 41 H 0.086 0.914 42 H 0.075 0.925 43 H 0.419 0.581 44 H 0.405 0.595 45 H 0.103 0.897 46 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.433 -3.368 -2.491 4.844 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 N -0.331 5.331 3 C 0.310 3.690 4 O -0.459 6.459 5 C -0.172 4.172 6 C 0.001 3.999 7 O -0.239 6.239 8 C 0.071 3.929 9 C -0.161 4.161 10 C -0.086 4.086 11 C -0.188 4.188 12 O -0.363 6.363 13 Si 0.691 3.309 14 C -0.172 4.172 15 C -0.092 4.092 16 C -0.229 4.229 17 C 0.012 3.988 18 H 0.134 0.866 19 C -0.171 4.171 20 C -0.150 4.150 21 H 0.161 0.839 22 C 0.310 3.690 23 N -0.400 5.400 24 O -0.474 6.474 25 C -0.160 4.160 26 H 0.084 0.916 27 H 0.113 0.887 28 H 0.102 0.898 29 H 0.144 0.856 30 H 0.139 0.861 31 H 0.084 0.916 32 H 0.085 0.915 33 H 0.144 0.856 34 H 0.123 0.877 35 H 0.246 0.754 36 H -0.212 1.212 37 H -0.227 1.227 38 H 0.168 0.832 39 H 0.172 0.828 40 H 0.155 0.845 41 H 0.105 0.895 42 H 0.094 0.906 43 H 0.250 0.750 44 H 0.236 0.764 45 H 0.121 0.879 46 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges 2.182 -2.472 -2.791 4.320 hybrid contribution -0.466 -1.146 -0.483 1.328 sum 1.715 -3.618 -3.273 5.172 Atomic orbital electron populations 1.22107 0.77461 1.04943 1.03331 1.47825 1.08109 1.05098 1.72060 1.20625 0.87392 0.86021 0.75002 1.90711 1.15517 1.87986 1.51721 1.21486 0.99021 0.88975 1.07749 1.22428 0.94272 0.80670 1.02567 1.85953 1.36218 1.12975 1.88788 1.19154 0.90562 0.86286 0.96920 1.20326 1.00602 0.89296 1.05907 1.20247 0.94014 0.95076 0.99233 1.25313 1.03562 0.99755 0.90151 1.86470 1.38848 1.95182 1.15837 0.93571 0.78510 0.73213 0.85608 1.21174 0.93268 0.98807 1.03992 1.21267 1.01358 0.91016 0.95605 1.21557 0.92517 1.00954 1.07916 1.22678 0.98014 0.81213 0.96852 0.86552 1.23308 1.03144 0.93530 0.97151 1.22578 0.99588 0.93243 0.99638 0.83881 1.20725 0.85656 0.82702 0.79944 1.43810 1.33950 1.25478 1.36796 1.90745 1.41843 1.77713 1.37063 1.23385 1.03116 0.92148 0.97342 0.91567 0.88685 0.89791 0.85650 0.86056 0.91604 0.91527 0.85636 0.87681 0.75435 1.21171 1.22664 0.83199 0.82768 0.84524 0.89535 0.90601 0.75017 0.76387 0.87885 0.88744 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.39 9.17 127.77 1.17 0.78 16 2 N -0.60 0.81 3.09 -819.13 -2.53 -1.72 16 3 C 0.52 1.22 7.67 87.66 0.67 1.89 16 4 O -0.58 -5.71 15.44 -3.04 -0.05 -5.75 16 5 C -0.13 0.28 4.68 29.85 0.14 0.42 16 6 C 0.08 0.17 4.03 71.98 0.29 0.46 16 7 O -0.33 -1.75 10.14 -92.42 -0.94 -2.68 16 8 C 0.12 0.68 6.69 22.51 0.15 0.83 16 9 C -0.14 -0.80 9.62 22.36 0.22 -0.59 16 10 C -0.09 -0.21 5.35 -19.88 -0.11 -0.31 16 11 C -0.08 -0.08 2.80 71.24 0.20 0.12 16 12 O -0.56 -1.05 12.83 -148.98 -1.91 -2.96 16 13 Si 0.79 -1.35 29.80 68.60 2.04 0.69 16 14 C -0.15 0.05 8.67 22.28 0.19 0.24 16 15 C -0.07 -0.01 10.04 22.25 0.22 0.21 16 16 C -0.21 -0.69 9.04 22.36 0.20 -0.48 16 17 C 0.12 -0.21 4.25 45.61 0.19 -0.02 16 18 H 0.12 0.08 7.18 -2.39 -0.02 0.06 16 19 C -0.13 0.10 6.99 31.12 0.22 0.32 16 20 C -0.13 0.63 4.15 -11.01 -0.05 0.58 16 21 H 0.14 -1.37 8.14 -2.39 -0.02 -1.39 16 22 C 0.52 0.01 7.63 87.66 0.67 0.68 16 23 N -0.84 5.92 8.87 -173.53 -1.54 4.38 16 24 O -0.59 -6.14 16.74 -3.02 -0.05 -6.19 16 25 C -0.12 0.78 7.13 31.21 0.22 1.00 16 26 H 0.07 -0.40 8.14 -2.39 -0.02 -0.42 16 27 H 0.09 -0.94 6.61 -2.39 -0.02 -0.95 16 28 H 0.08 -0.57 5.79 -2.39 -0.01 -0.58 16 29 H 0.13 -0.73 7.41 -2.39 -0.02 -0.75 16 30 H 0.12 -0.58 8.11 -2.39 -0.02 -0.60 16 31 H 0.07 0.22 7.61 -2.39 -0.02 0.20 16 32 H 0.07 0.20 7.63 -2.38 -0.02 0.18 16 33 H 0.13 0.78 8.06 -2.91 -0.02 0.76 16 34 H 0.11 0.26 7.96 -2.39 -0.02 0.24 16 35 H 0.40 -2.51 8.70 -74.06 -0.64 -3.15 16 36 H -0.28 -0.82 7.11 99.48 0.71 -0.11 16 37 H -0.30 -1.67 7.11 99.48 0.71 -0.97 16 38 H 0.15 -0.82 4.90 -2.91 -0.01 -0.83 16 39 H 0.15 -0.78 8.06 -2.91 -0.02 -0.81 16 40 H 0.14 0.23 6.30 -2.91 -0.02 0.21 16 41 H 0.09 0.23 6.75 -2.39 -0.02 0.22 16 42 H 0.08 0.00 8.14 -2.39 -0.02 -0.02 16 43 H 0.42 -5.63 8.83 -92.71 -0.82 -6.45 16 44 H 0.41 -2.93 8.93 -92.71 -0.83 -3.76 16 45 H 0.10 -0.97 8.14 -2.39 -0.02 -0.99 16 46 H 0.09 -0.57 5.95 -2.39 -0.01 -0.59 16 Total: 0.00 -27.03 376.37 -1.57 -28.60 By element: Atomic # 1 Polarization: -19.30 SS G_CDS: -1.20 Total: -20.51 kcal Atomic # 6 Polarization: 1.53 SS G_CDS: 4.61 Total: 6.14 kcal Atomic # 7 Polarization: 6.74 SS G_CDS: -4.07 Total: 2.67 kcal Atomic # 8 Polarization: -14.64 SS G_CDS: -2.95 Total: -17.59 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: 2.04 Total: 0.69 kcal Total: -27.03 -1.57 -28.60 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12311536_4549614.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.948 kcal (2) G-P(sol) polarization free energy of solvation -27.030 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.978 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.567 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.597 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.545 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds