Wall clock time and date at job start Tue Mar 9 2021 12:52:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.34775 * 120.00136 * 2 1 4 4 O 1.21614 * 119.99756 * 185.47558 * 3 2 1 5 5 C 1.47376 * 120.00081 * 5.46582 * 3 2 1 6 6 C 1.36420 * 127.19021 * 174.20602 * 5 3 2 7 7 C 1.50695 * 125.80006 * 0.04543 * 6 5 3 8 8 O 1.42898 * 109.47495 * 89.99896 * 7 6 5 9 9 C 1.35896 * 117.00092 * 180.02562 * 8 7 6 10 10 C 1.38734 * 120.05784 * 179.97438 * 9 8 7 11 11 C 1.38143 * 119.94670 * 180.02562 * 10 9 8 12 12 C 1.38268 * 120.05514 * 0.02562 * 11 10 9 13 13 C 1.50700 * 119.94388 * 179.97438 * 12 11 10 14 14 O 1.42899 * 109.46925 * 299.99789 * 13 12 11 15 15 Si 1.86300 * 109.47113 * 180.02562 * 13 12 11 16 16 C 1.38270 * 120.11116 * 0.25583 * 12 11 10 17 17 C 1.38143 * 120.05541 * 359.45082 * 16 12 11 18 18 O 1.33651 * 108.39558 * 180.30243 * 6 5 3 19 19 C 1.34218 * 110.90714 * 359.55362 * 18 6 5 20 20 C 1.34176 * 109.12302 * 0.45358 * 19 18 6 21 21 C 1.46501 * 119.99367 * 179.97438 * 2 1 3 22 22 H 1.09003 * 112.84299 * 185.72140 * 21 2 1 23 23 C 1.53774 * 113.61850 * 317.03171 * 21 2 1 24 24 C 1.53780 * 87.08287 * 139.98111 * 23 21 2 25 25 H 1.09007 * 113.69109 * 89.12432 * 24 23 21 26 26 C 1.50696 * 113.61609 * 220.01915 * 24 23 21 27 27 N 1.34783 * 119.99816 * 277.49353 * 26 24 23 28 28 O 1.21281 * 120.00167 * 97.49713 * 26 24 23 29 29 C 1.53780 * 87.08214 * 334.56828 * 24 23 21 30 30 H 1.09004 * 109.47025 * 58.27544 * 1 2 3 31 31 H 1.09002 * 109.47621 * 178.27824 * 1 2 3 32 32 H 1.09000 * 109.47063 * 298.28228 * 1 2 3 33 33 H 1.08995 * 109.47175 * 329.99166 * 7 6 5 34 34 H 1.09001 * 109.46918 * 209.99656 * 7 6 5 35 35 H 1.07996 * 120.02766 * 0.03805 * 10 9 8 36 36 H 1.08002 * 119.97330 * 179.97438 * 11 10 9 37 37 H 1.08997 * 109.47514 * 60.00147 * 13 12 11 38 38 H 0.96699 * 114.00831 * 300.00355 * 14 13 12 39 39 H 1.48504 * 109.99914 * 58.68064 * 15 13 12 40 40 H 1.48497 * 110.00125 * 180.02562 * 15 13 12 41 41 H 1.07998 * 119.97087 * 179.70398 * 16 12 11 42 42 H 1.07997 * 120.02853 * 180.24309 * 17 16 12 43 43 H 1.07999 * 125.43889 * 180.16450 * 19 18 6 44 44 H 1.08004 * 127.01817 * 179.75232 * 20 19 18 45 45 H 1.08999 * 113.61344 * 254.53034 * 23 21 2 46 46 H 1.08994 * 113.61774 * 25.43228 * 23 21 2 47 47 H 0.97001 * 119.99808 * 0.02562 * 27 26 24 48 48 H 0.97003 * 119.99415 * 180.02562 * 27 26 24 49 49 H 1.09003 * 113.61549 * 270.88865 * 29 24 23 50 50 H 1.08999 * 113.61791 * 139.97764 * 29 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3509 1.1695 -0.1005 5 6 1.4071 2.4406 0.1216 6 6 1.9410 3.6897 0.2473 7 6 3.4107 4.0204 0.2865 8 8 3.8813 4.2573 -1.0418 9 6 5.1961 4.5699 -1.1839 10 6 5.7204 4.8119 -2.4454 11 6 7.0575 5.1290 -2.5872 12 6 7.8732 5.2047 -1.4734 13 6 9.3315 5.5502 -1.6311 14 8 9.9658 4.5729 -2.4586 15 14 10.1494 5.5708 0.0426 16 6 7.3544 4.9582 -0.2156 17 6 6.0167 4.6467 -0.0678 18 8 0.9389 4.5697 0.3355 19 6 -0.2498 3.9508 0.2631 20 6 -0.0507 2.6302 0.1337 21 6 2.1974 -1.2688 0.0006 22 1 3.2746 -1.1356 0.1007 23 6 1.6125 -2.3174 0.9614 24 6 1.8966 -3.3619 -0.1309 25 1 2.8914 -3.8031 -0.0668 26 6 0.8075 -4.3930 -0.2781 27 7 0.7717 -5.4579 0.5473 28 8 -0.0367 -4.2646 -1.1393 29 6 1.7973 -2.2116 -1.1466 30 1 -0.3633 0.5404 -0.8741 31 1 -0.3634 -1.0272 -0.0309 32 1 -0.3633 0.4869 0.9050 33 1 3.9593 3.1858 0.7230 34 1 3.5661 4.9135 0.8917 35 1 5.0838 4.7527 -3.3157 36 1 7.4662 5.3170 -3.5691 37 1 9.4242 6.5330 -2.0933 38 1 9.9221 3.6727 -2.1083 39 1 10.0023 4.2455 0.6962 40 1 11.5879 5.9109 -0.0991 41 1 7.9947 5.0133 0.6524 42 1 5.6111 4.4581 0.9152 43 1 -1.2130 4.4375 0.3070 44 1 -0.8070 1.8633 0.0543 45 1 2.2043 -2.4592 1.8657 46 1 0.5512 -2.1778 1.1665 47 1 1.4467 -5.5604 1.2363 48 1 0.0708 -6.1218 0.4523 49 1 0.7863 -2.0429 -1.5178 50 1 2.5382 -2.2679 -1.9441 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12311536_4549634.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:01 Heat of formation + Delta-G solvation = -42.376822 kcal Electronic energy + Delta-G solvation = -35502.387720 eV Core-core repulsion = 30658.443025 eV Total energy + Delta-G solvation = -4843.944696 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.161 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -43.75257 -41.77779 -41.18053 -40.32045 -39.16320 -38.51551 -37.19549 -35.83889 -34.66693 -33.82776 -32.79945 -31.90122 -31.32349 -28.64314 -28.26725 -27.06640 -26.86190 -26.07420 -24.51102 -23.70366 -22.84617 -22.25554 -21.59094 -20.44344 -20.09081 -19.39415 -18.88185 -18.53077 -18.23939 -17.93789 -17.53110 -17.23562 -16.95416 -16.90179 -16.63609 -16.56706 -16.21902 -16.14380 -16.05027 -15.64538 -15.40072 -15.25905 -14.82163 -14.67736 -14.52854 -14.27181 -14.19694 -14.17990 -13.99032 -13.62362 -13.49293 -13.40495 -13.31087 -13.06543 -12.62715 -12.42958 -12.17348 -12.15202 -12.03915 -11.99485 -11.78431 -11.54725 -11.01914 -10.91697 -10.83777 -10.74534 -10.51784 -9.95954 -9.94225 -9.63633 -9.11134 -4.91591 0.03890 0.38938 0.40555 0.95333 1.35286 1.50397 1.54269 1.64797 1.85153 2.01397 2.13078 2.51079 2.52830 2.75523 3.20466 3.31263 3.32705 3.45221 3.48700 3.61300 3.68109 3.70892 3.74897 3.85009 3.93497 3.97263 3.97971 4.07835 4.12849 4.33283 4.33472 4.36020 4.37441 4.43417 4.52754 4.53773 4.56848 4.61128 4.61746 4.71860 4.75419 4.76753 4.90920 5.03925 5.10711 5.12600 5.24994 5.35990 5.46190 5.58073 5.71847 5.78246 5.87710 6.25675 6.27939 6.38485 6.48162 7.10207 7.20855 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.596 5.596 3 C 0.591 3.409 4 O -0.532 6.532 5 C -0.207 4.207 6 C 0.063 3.937 7 C 0.138 3.862 8 O -0.302 6.302 9 C 0.144 3.856 10 C -0.148 4.148 11 C -0.052 4.052 12 C -0.157 4.157 13 C -0.069 4.069 14 O -0.531 6.531 15 Si 0.681 3.319 16 C -0.074 4.074 17 C -0.203 4.203 18 O -0.165 6.165 19 C -0.018 4.018 20 C -0.211 4.211 21 C 0.124 3.876 22 H 0.127 0.873 23 C -0.134 4.134 24 C -0.138 4.138 25 H 0.120 0.880 26 C 0.528 3.472 27 N -0.854 5.854 28 O -0.540 6.540 29 C -0.129 4.129 30 H 0.072 0.928 31 H 0.081 0.919 32 H 0.071 0.929 33 H 0.113 0.887 34 H 0.084 0.916 35 H 0.133 0.867 36 H 0.133 0.867 37 H 0.117 0.883 38 H 0.376 0.624 39 H -0.261 1.261 40 H -0.258 1.258 41 H 0.129 0.871 42 H 0.132 0.868 43 H 0.214 0.786 44 H 0.177 0.823 45 H 0.085 0.915 46 H 0.093 0.907 47 H 0.403 0.597 48 H 0.402 0.598 49 H 0.101 0.899 50 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.387 -1.011 6.475 7.378 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.328 5.328 3 C 0.381 3.619 4 O -0.410 6.410 5 C -0.212 4.212 6 C 0.010 3.990 7 C 0.063 3.937 8 O -0.216 6.216 9 C 0.098 3.902 10 C -0.167 4.167 11 C -0.070 4.070 12 C -0.158 4.158 13 C -0.179 4.179 14 O -0.337 6.337 15 Si 0.582 3.418 16 C -0.092 4.092 17 C -0.221 4.221 18 O -0.060 6.060 19 C -0.084 4.084 20 C -0.229 4.229 21 C 0.021 3.979 22 H 0.145 0.855 23 C -0.173 4.173 24 C -0.160 4.160 25 H 0.138 0.862 26 C 0.313 3.687 27 N -0.417 5.417 28 O -0.416 6.416 29 C -0.168 4.168 30 H 0.090 0.910 31 H 0.100 0.900 32 H 0.090 0.910 33 H 0.130 0.870 34 H 0.102 0.898 35 H 0.151 0.849 36 H 0.151 0.849 37 H 0.135 0.865 38 H 0.223 0.777 39 H -0.186 1.186 40 H -0.183 1.183 41 H 0.147 0.853 42 H 0.149 0.851 43 H 0.230 0.770 44 H 0.194 0.806 45 H 0.104 0.896 46 H 0.112 0.888 47 H 0.231 0.769 48 H 0.233 0.767 49 H 0.120 0.880 50 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -2.589 -0.291 5.846 6.400 hybrid contribution -0.347 -1.786 -0.035 1.819 sum -2.936 -2.077 5.811 6.834 Atomic orbital electron populations 1.22357 0.79480 1.03771 1.02100 1.47484 1.06912 1.05150 1.73231 1.17237 0.86326 0.82536 0.75850 1.90795 1.13397 1.86995 1.49826 1.21159 0.93839 0.93570 1.12612 1.21907 0.89238 0.86585 1.01241 1.21047 0.85167 1.03303 0.84149 1.86097 1.22799 1.84105 1.28601 1.18965 0.82302 0.94549 0.94357 1.20493 0.95756 1.05166 0.95278 1.20820 0.91699 0.95644 0.98802 1.20167 0.96559 1.05473 0.93601 1.24939 0.91275 0.94907 1.06755 1.86586 1.78449 1.20046 1.48668 0.95120 0.81438 0.87162 0.78044 1.20770 0.94733 0.97224 0.96456 1.21170 0.94747 1.08087 0.98112 1.83786 1.14373 1.37819 1.70037 1.24154 0.87637 0.92525 1.04088 1.23697 0.94633 0.97269 1.07322 1.22624 0.98337 0.80830 0.96148 0.85490 1.23420 1.02868 0.93685 0.97285 1.22570 0.99202 0.94054 1.00209 0.86198 1.20377 0.85867 0.81996 0.80488 1.43906 1.34174 1.26409 1.37230 1.90767 1.40214 1.76402 1.34255 1.23380 1.04261 0.92278 0.96865 0.90978 0.90028 0.91036 0.86978 0.89814 0.84907 0.84872 0.86496 0.77653 1.18551 1.18309 0.85325 0.85065 0.76968 0.80626 0.89621 0.88849 0.76896 0.76692 0.88026 0.89994 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.13 7.45 59.85 0.45 0.32 16 2 N -0.60 -0.33 3.09 -174.28 -0.54 -0.87 16 3 C 0.59 1.83 7.66 -12.54 -0.10 1.73 16 4 O -0.53 -3.05 14.40 5.27 0.08 -2.97 16 5 C -0.21 -0.42 6.19 -103.28 -0.64 -1.06 16 6 C 0.06 0.14 7.00 -34.97 -0.24 -0.10 16 7 C 0.14 0.24 4.69 36.00 0.17 0.41 16 8 O -0.30 -1.18 10.12 -19.41 -0.20 -1.38 16 9 C 0.14 0.44 6.69 -39.21 -0.26 0.18 16 10 C -0.15 -0.40 9.99 -39.43 -0.39 -0.79 16 11 C -0.05 -0.10 9.60 -39.61 -0.38 -0.48 16 12 C -0.16 -0.20 5.39 -104.60 -0.56 -0.76 16 13 C -0.07 -0.04 2.82 36.01 0.10 0.06 16 14 O -0.53 -1.10 12.76 -35.23 -0.45 -1.55 16 15 Si 0.68 -0.19 29.78 -169.99 -5.06 -5.25 16 16 C -0.07 -0.06 8.66 -39.60 -0.34 -0.40 16 17 C -0.20 -0.30 9.04 -39.43 -0.36 -0.65 16 18 O -0.17 -0.23 10.52 7.65 0.08 -0.15 16 19 C -0.02 0.02 12.03 29.30 0.35 0.37 16 20 C -0.21 0.17 8.89 -37.46 -0.33 -0.16 16 21 C 0.12 -0.04 4.23 -67.12 -0.28 -0.33 16 22 H 0.13 0.07 7.21 -51.93 -0.37 -0.30 16 23 C -0.13 0.34 7.03 -25.92 -0.18 0.15 16 24 C -0.14 0.27 4.15 -90.96 -0.38 -0.11 16 25 H 0.12 -0.45 8.14 -51.93 -0.42 -0.88 16 26 C 0.53 0.12 7.63 -10.98 -0.08 0.03 16 27 N -0.85 2.57 8.87 31.22 0.28 2.85 16 28 O -0.54 -2.59 16.74 5.56 0.09 -2.50 16 29 C -0.13 0.02 6.88 -25.92 -0.18 -0.16 16 30 H 0.07 -0.17 6.56 -51.93 -0.34 -0.51 16 31 H 0.08 -0.19 5.67 -51.93 -0.29 -0.49 16 32 H 0.07 -0.23 6.44 -51.93 -0.33 -0.57 16 33 H 0.11 0.21 6.14 -51.93 -0.32 -0.11 16 34 H 0.08 -0.05 7.66 -51.93 -0.40 -0.45 16 35 H 0.13 0.25 8.06 -52.49 -0.42 -0.17 16 36 H 0.13 0.12 8.06 -52.49 -0.42 -0.30 16 37 H 0.12 -0.03 7.96 -51.93 -0.41 -0.44 16 38 H 0.38 -0.20 8.70 45.56 0.40 0.20 16 39 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 40 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 41 H 0.13 -0.16 4.87 -52.49 -0.26 -0.41 16 42 H 0.13 -0.07 6.30 -52.49 -0.33 -0.40 16 43 H 0.21 -1.11 8.06 -52.49 -0.42 -1.53 16 44 H 0.18 -0.60 4.57 -52.48 -0.24 -0.84 16 45 H 0.09 -0.31 8.14 -51.93 -0.42 -0.74 16 46 H 0.09 -0.22 6.35 -51.93 -0.33 -0.55 16 47 H 0.40 -2.34 8.83 -40.82 -0.36 -2.70 16 48 H 0.40 -1.31 8.93 -40.82 -0.36 -1.68 16 49 H 0.10 0.12 6.37 -51.93 -0.33 -0.21 16 50 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 LS Contribution 407.67 15.07 6.14 6.14 Total: 0.00 -12.08 407.67 -9.25 -21.33 By element: Atomic # 1 Polarization: -7.88 SS G_CDS: -6.02 Total: -13.91 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -3.65 Total: -1.75 kcal Atomic # 7 Polarization: 2.24 SS G_CDS: -0.26 Total: 1.98 kcal Atomic # 8 Polarization: -8.15 SS G_CDS: -0.40 Total: -8.55 kcal Atomic # 14 Polarization: -0.19 SS G_CDS: -5.06 Total: -5.25 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -12.08 -9.25 -21.33 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12311536_4549634.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.044 kcal (2) G-P(sol) polarization free energy of solvation -12.083 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.127 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.250 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.333 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.377 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds