Wall clock time and date at job start Tue Mar 9 2021 12:52:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.34775 * 120.00136 * 2 1 4 4 O 1.21614 * 119.99756 * 185.47558 * 3 2 1 5 5 C 1.47376 * 120.00081 * 5.46582 * 3 2 1 6 6 C 1.36420 * 127.19021 * 174.20602 * 5 3 2 7 7 C 1.50695 * 125.80006 * 0.04543 * 6 5 3 8 8 O 1.42898 * 109.47495 * 89.99896 * 7 6 5 9 9 C 1.35896 * 117.00092 * 180.02562 * 8 7 6 10 10 C 1.38734 * 120.05784 * 179.97438 * 9 8 7 11 11 C 1.38143 * 119.94670 * 180.02562 * 10 9 8 12 12 C 1.38268 * 120.05514 * 0.02562 * 11 10 9 13 13 C 1.50700 * 119.94388 * 179.97438 * 12 11 10 14 14 O 1.42899 * 109.46925 * 299.99789 * 13 12 11 15 15 Si 1.86300 * 109.47113 * 180.02562 * 13 12 11 16 16 C 1.38270 * 120.11116 * 0.25583 * 12 11 10 17 17 C 1.38143 * 120.05541 * 359.45082 * 16 12 11 18 18 O 1.33651 * 108.39558 * 180.30243 * 6 5 3 19 19 C 1.34218 * 110.90714 * 359.55362 * 18 6 5 20 20 C 1.34176 * 109.12302 * 0.45358 * 19 18 6 21 21 C 1.46501 * 119.99367 * 179.97438 * 2 1 3 22 22 H 1.09003 * 112.84299 * 185.72140 * 21 2 1 23 23 C 1.53774 * 113.61850 * 317.03171 * 21 2 1 24 24 C 1.53780 * 87.08287 * 139.98111 * 23 21 2 25 25 H 1.09007 * 113.69109 * 89.12432 * 24 23 21 26 26 C 1.50696 * 113.61609 * 220.01915 * 24 23 21 27 27 N 1.34783 * 119.99816 * 277.49353 * 26 24 23 28 28 O 1.21281 * 120.00167 * 97.49713 * 26 24 23 29 29 C 1.53780 * 87.08214 * 334.56828 * 24 23 21 30 30 H 1.09004 * 109.47025 * 58.27544 * 1 2 3 31 31 H 1.09002 * 109.47621 * 178.27824 * 1 2 3 32 32 H 1.09000 * 109.47063 * 298.28228 * 1 2 3 33 33 H 1.08995 * 109.47175 * 329.99166 * 7 6 5 34 34 H 1.09001 * 109.46918 * 209.99656 * 7 6 5 35 35 H 1.07996 * 120.02766 * 0.03805 * 10 9 8 36 36 H 1.08002 * 119.97330 * 179.97438 * 11 10 9 37 37 H 1.08997 * 109.47514 * 60.00147 * 13 12 11 38 38 H 0.96699 * 114.00831 * 300.00355 * 14 13 12 39 39 H 1.48504 * 109.99914 * 58.68064 * 15 13 12 40 40 H 1.48497 * 110.00125 * 180.02562 * 15 13 12 41 41 H 1.07998 * 119.97087 * 179.70398 * 16 12 11 42 42 H 1.07997 * 120.02853 * 180.24309 * 17 16 12 43 43 H 1.07999 * 125.43889 * 180.16450 * 19 18 6 44 44 H 1.08004 * 127.01817 * 179.75232 * 20 19 18 45 45 H 1.08999 * 113.61344 * 254.53034 * 23 21 2 46 46 H 1.08994 * 113.61774 * 25.43228 * 23 21 2 47 47 H 0.97001 * 119.99808 * 0.02562 * 27 26 24 48 48 H 0.97003 * 119.99415 * 180.02562 * 27 26 24 49 49 H 1.09003 * 113.61549 * 270.88865 * 29 24 23 50 50 H 1.08999 * 113.61791 * 139.97764 * 29 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3509 1.1695 -0.1005 5 6 1.4071 2.4406 0.1216 6 6 1.9410 3.6897 0.2473 7 6 3.4107 4.0204 0.2865 8 8 3.8813 4.2573 -1.0418 9 6 5.1961 4.5699 -1.1839 10 6 5.7204 4.8119 -2.4454 11 6 7.0575 5.1290 -2.5872 12 6 7.8732 5.2047 -1.4734 13 6 9.3315 5.5502 -1.6311 14 8 9.9658 4.5729 -2.4586 15 14 10.1494 5.5708 0.0426 16 6 7.3544 4.9582 -0.2156 17 6 6.0167 4.6467 -0.0678 18 8 0.9389 4.5697 0.3355 19 6 -0.2498 3.9508 0.2631 20 6 -0.0507 2.6302 0.1337 21 6 2.1974 -1.2688 0.0006 22 1 3.2746 -1.1356 0.1007 23 6 1.6125 -2.3174 0.9614 24 6 1.8966 -3.3619 -0.1309 25 1 2.8914 -3.8031 -0.0668 26 6 0.8075 -4.3930 -0.2781 27 7 0.7717 -5.4579 0.5473 28 8 -0.0367 -4.2646 -1.1393 29 6 1.7973 -2.2116 -1.1466 30 1 -0.3633 0.5404 -0.8741 31 1 -0.3634 -1.0272 -0.0309 32 1 -0.3633 0.4869 0.9050 33 1 3.9593 3.1858 0.7230 34 1 3.5661 4.9135 0.8917 35 1 5.0838 4.7527 -3.3157 36 1 7.4662 5.3170 -3.5691 37 1 9.4242 6.5330 -2.0933 38 1 9.9221 3.6727 -2.1083 39 1 10.0023 4.2455 0.6962 40 1 11.5879 5.9109 -0.0991 41 1 7.9947 5.0133 0.6524 42 1 5.6111 4.4581 0.9152 43 1 -1.2130 4.4375 0.3070 44 1 -0.8070 1.8633 0.0543 45 1 2.2043 -2.4592 1.8657 46 1 0.5512 -2.1778 1.1665 47 1 1.4467 -5.5604 1.2363 48 1 0.0708 -6.1218 0.4523 49 1 0.7863 -2.0429 -1.5178 50 1 2.5382 -2.2679 -1.9441 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12311536_4549634.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:00 Heat of formation + Delta-G solvation = -46.956908 kcal Electronic energy + Delta-G solvation = -35502.586328 eV Core-core repulsion = 30658.443025 eV Total energy + Delta-G solvation = -4844.143303 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 387.161 amu Computer time = 1.30 seconds Orbital eigenvalues (eV) -43.75290 -41.77508 -41.30460 -40.42110 -39.28213 -38.58727 -37.31428 -35.89444 -34.62288 -33.83882 -32.84684 -31.99065 -31.41276 -28.56911 -28.30214 -27.06259 -26.78889 -26.15333 -24.55974 -23.78652 -22.82546 -22.36185 -21.57031 -20.39147 -20.09665 -19.51653 -18.86213 -18.57819 -18.29356 -17.86894 -17.59358 -17.27206 -17.02451 -16.98307 -16.66916 -16.58367 -16.26757 -16.17340 -16.12816 -15.69542 -15.44612 -15.29231 -14.86187 -14.70189 -14.56014 -14.40700 -14.25520 -14.19807 -14.01256 -13.59976 -13.57341 -13.51912 -13.22069 -13.12213 -12.54944 -12.35576 -12.31228 -12.13013 -12.12471 -12.08662 -11.70608 -11.64832 -11.16603 -10.93465 -10.90809 -10.67690 -10.60213 -10.06037 -9.98164 -9.63708 -9.25106 -4.91917 -0.05834 0.25897 0.28719 1.02944 1.32860 1.50651 1.55215 1.61250 1.84669 1.96214 2.03291 2.44423 2.63158 2.63410 3.26935 3.34440 3.39638 3.42765 3.48888 3.68361 3.68887 3.70758 3.78775 3.82712 3.90315 3.93820 4.06790 4.11500 4.24753 4.28456 4.41004 4.42956 4.45480 4.49611 4.54612 4.55266 4.62649 4.65329 4.68251 4.74165 4.80737 4.88811 4.90940 4.94708 5.13546 5.14753 5.24419 5.25819 5.46114 5.47547 5.68181 5.86705 5.89243 6.21935 6.25681 6.44848 6.48797 6.96673 7.32076 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.593 5.593 3 C 0.581 3.419 4 O -0.570 6.570 5 C -0.223 4.223 6 C 0.041 3.959 7 C 0.137 3.863 8 O -0.323 6.323 9 C 0.125 3.875 10 C -0.164 4.164 11 C -0.058 4.058 12 C -0.158 4.158 13 C -0.079 4.079 14 O -0.550 6.550 15 Si 0.767 3.233 16 C -0.075 4.075 17 C -0.204 4.204 18 O -0.176 6.176 19 C -0.012 4.012 20 C -0.214 4.214 21 C 0.117 3.883 22 H 0.115 0.885 23 C -0.117 4.117 24 C -0.128 4.128 25 H 0.144 0.856 26 C 0.525 3.475 27 N -0.837 5.837 28 O -0.593 6.593 29 C -0.134 4.134 30 H 0.076 0.924 31 H 0.086 0.914 32 H 0.089 0.911 33 H 0.105 0.895 34 H 0.104 0.896 35 H 0.131 0.869 36 H 0.139 0.861 37 H 0.126 0.874 38 H 0.385 0.615 39 H -0.284 1.284 40 H -0.302 1.302 41 H 0.151 0.849 42 H 0.149 0.851 43 H 0.253 0.747 44 H 0.201 0.799 45 H 0.105 0.895 46 H 0.095 0.905 47 H 0.419 0.581 48 H 0.405 0.595 49 H 0.087 0.913 50 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.176 -1.207 8.186 9.268 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.323 5.323 3 C 0.372 3.628 4 O -0.451 6.451 5 C -0.227 4.227 6 C -0.012 4.012 7 C 0.063 3.937 8 O -0.238 6.238 9 C 0.080 3.920 10 C -0.183 4.183 11 C -0.076 4.076 12 C -0.159 4.159 13 C -0.187 4.187 14 O -0.358 6.358 15 Si 0.673 3.327 16 C -0.092 4.092 17 C -0.223 4.223 18 O -0.071 6.071 19 C -0.077 4.077 20 C -0.232 4.232 21 C 0.014 3.986 22 H 0.133 0.867 23 C -0.156 4.156 24 C -0.149 4.149 25 H 0.161 0.839 26 C 0.311 3.689 27 N -0.400 5.400 28 O -0.473 6.473 29 C -0.173 4.173 30 H 0.094 0.906 31 H 0.105 0.895 32 H 0.108 0.892 33 H 0.123 0.877 34 H 0.122 0.878 35 H 0.149 0.851 36 H 0.156 0.844 37 H 0.143 0.857 38 H 0.234 0.766 39 H -0.210 1.210 40 H -0.231 1.231 41 H 0.168 0.832 42 H 0.167 0.833 43 H 0.268 0.732 44 H 0.217 0.783 45 H 0.124 0.876 46 H 0.114 0.886 47 H 0.250 0.750 48 H 0.237 0.763 49 H 0.105 0.895 50 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -3.406 -0.527 7.589 8.335 hybrid contribution -0.118 -1.786 -0.591 1.885 sum -3.524 -2.313 6.998 8.169 Atomic orbital electron populations 1.22534 0.77917 1.04454 1.03166 1.47597 1.07966 1.04754 1.71963 1.17530 0.86103 0.83524 0.75661 1.90761 1.14923 1.87593 1.51837 1.21336 0.95450 0.93078 1.12860 1.22032 0.89670 0.87006 1.02472 1.21108 0.85169 1.03879 0.83533 1.86055 1.23321 1.84366 1.30013 1.19187 0.82431 0.95344 0.95038 1.20620 0.96291 1.05951 0.95416 1.20932 0.91466 0.95728 0.99445 1.20287 0.96801 1.05130 0.93644 1.25198 0.90850 0.95039 1.07642 1.86557 1.78627 1.20975 1.49634 0.94136 0.77862 0.84695 0.76021 1.21021 0.94748 0.96448 0.97016 1.21413 0.94919 1.07471 0.98495 1.83784 1.15063 1.38131 1.70138 1.24997 0.87957 0.92616 1.02173 1.23989 0.93573 0.98272 1.07396 1.22677 0.97948 0.80894 0.97092 0.86676 1.23339 1.03130 0.91788 0.97333 1.22572 0.99669 0.93232 0.99446 0.83862 1.20686 0.85533 0.82686 0.80032 1.43798 1.34301 1.25277 1.36581 1.90747 1.42258 1.77721 1.36603 1.23345 1.03108 0.93692 0.97172 0.90586 0.89520 0.89237 0.87699 0.87819 0.85137 0.84352 0.85671 0.76582 1.21018 1.23083 0.83200 0.83325 0.73157 0.78270 0.87646 0.88629 0.75002 0.76345 0.89469 0.90858 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.25 7.45 127.77 0.95 0.70 16 2 N -0.59 -1.14 3.09 -823.56 -2.54 -3.68 16 3 C 0.58 4.51 7.66 86.65 0.66 5.18 16 4 O -0.57 -7.94 14.40 -4.08 -0.06 -8.00 16 5 C -0.22 -1.12 6.19 -18.99 -0.12 -1.23 16 6 C 0.04 0.24 7.00 25.26 0.18 0.41 16 7 C 0.14 0.69 4.69 71.23 0.33 1.03 16 8 O -0.32 -3.21 10.12 -92.38 -0.93 -4.15 16 9 C 0.12 0.98 6.69 22.51 0.15 1.13 16 10 C -0.16 -1.19 9.99 22.37 0.22 -0.97 16 11 C -0.06 -0.28 9.60 22.25 0.21 -0.07 16 12 C -0.16 -0.44 5.39 -19.85 -0.11 -0.55 16 13 C -0.08 -0.09 2.82 71.24 0.20 0.11 16 14 O -0.55 -2.46 12.76 -148.98 -1.90 -4.37 16 15 Si 0.77 -0.67 29.78 68.60 2.04 1.37 16 16 C -0.07 -0.11 8.66 22.25 0.19 0.08 16 17 C -0.20 -0.73 9.04 22.37 0.20 -0.52 16 18 O -0.18 -0.52 10.52 4.44 0.05 -0.48 16 19 C -0.01 0.04 12.03 66.89 0.80 0.85 16 20 C -0.21 0.48 8.89 23.65 0.21 0.69 16 21 C 0.12 0.01 4.23 45.52 0.19 0.20 16 22 H 0.12 0.30 7.21 -2.39 -0.02 0.29 16 23 C -0.12 0.68 7.03 31.12 0.22 0.90 16 24 C -0.13 0.53 4.15 -11.02 -0.05 0.49 16 25 H 0.14 -1.27 8.14 -2.38 -0.02 -1.29 16 26 C 0.53 0.16 7.63 87.65 0.67 0.83 16 27 N -0.84 5.85 8.87 -173.53 -1.54 4.31 16 28 O -0.59 -6.27 16.74 -3.03 -0.05 -6.32 16 29 C -0.13 -0.12 6.88 31.12 0.21 0.09 16 30 H 0.08 -0.36 6.56 -2.39 -0.02 -0.38 16 31 H 0.09 -0.42 5.67 -2.39 -0.01 -0.43 16 32 H 0.09 -0.68 6.44 -2.39 -0.02 -0.70 16 33 H 0.11 0.61 6.14 -2.39 -0.01 0.60 16 34 H 0.10 -0.03 7.66 -2.39 -0.02 -0.05 16 35 H 0.13 0.84 8.06 -2.91 -0.02 0.82 16 36 H 0.14 0.41 8.06 -2.91 -0.02 0.39 16 37 H 0.13 -0.09 7.96 -2.39 -0.02 -0.11 16 38 H 0.39 -0.24 8.70 -74.06 -0.64 -0.89 16 39 H -0.28 -0.85 7.11 99.48 0.71 -0.14 16 40 H -0.30 -2.03 7.11 99.48 0.71 -1.32 16 41 H 0.15 -0.52 4.87 -2.91 -0.01 -0.53 16 42 H 0.15 -0.12 6.30 -2.91 -0.02 -0.14 16 43 H 0.25 -3.25 8.06 -2.91 -0.02 -3.27 16 44 H 0.20 -1.64 4.57 -2.91 -0.01 -1.65 16 45 H 0.11 -0.97 8.14 -2.39 -0.02 -0.99 16 46 H 0.10 -0.55 6.35 -2.39 -0.02 -0.56 16 47 H 0.42 -5.60 8.83 -92.71 -0.82 -6.42 16 48 H 0.41 -2.94 8.93 -92.71 -0.83 -3.77 16 49 H 0.09 0.36 6.37 -2.39 -0.02 0.34 16 50 H 0.07 0.16 8.14 -2.39 -0.02 0.14 16 Total: 0.00 -31.23 407.67 -0.79 -32.02 By element: Atomic # 1 Polarization: -18.86 SS G_CDS: -1.20 Total: -20.05 kcal Atomic # 6 Polarization: 3.99 SS G_CDS: 5.35 Total: 9.34 kcal Atomic # 7 Polarization: 4.71 SS G_CDS: -4.08 Total: 0.63 kcal Atomic # 8 Polarization: -20.41 SS G_CDS: -2.90 Total: -23.30 kcal Atomic # 14 Polarization: -0.67 SS G_CDS: 2.04 Total: 1.37 kcal Total: -31.23 -0.79 -32.02 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12311536_4549634.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.937 kcal (2) G-P(sol) polarization free energy of solvation -31.234 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.171 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.786 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.020 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.957 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds