Wall clock time and date at job start Tue Mar 9 2021 12:52:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35996 * 116.99936 * 2 1 4 4 C 1.39154 * 120.07410 * 179.97438 * 3 2 1 5 5 O 1.35993 * 120.07187 * 0.04929 * 4 3 2 6 6 C 1.42900 * 116.99644 * 179.97438 * 5 4 3 7 7 C 1.50701 * 109.46721 * 179.97438 * 6 5 4 8 8 O 1.21276 * 120.00200 * 0.02562 * 7 6 5 9 9 N 1.34780 * 120.00044 * 179.97438 * 7 6 5 10 10 C 1.46504 * 119.99660 * 0.02562 * 9 7 6 11 11 C 1.46493 * 120.00090 * 179.97438 * 9 7 6 12 12 H 1.08998 * 112.85332 * 348.80792 * 11 9 7 13 13 C 1.53784 * 113.61280 * 120.00941 * 11 9 7 14 14 C 1.53779 * 87.08183 * 139.98175 * 13 11 9 15 15 H 1.08993 * 113.61724 * 89.11938 * 14 13 11 16 16 C 1.50705 * 113.60948 * 219.92890 * 14 13 11 17 17 N 1.34778 * 119.99975 * 179.97438 * 16 14 13 18 18 O 1.21280 * 120.00296 * 0.02562 * 16 14 13 19 19 C 1.53774 * 87.08216 * 334.56312 * 14 13 11 20 20 C 1.38566 * 119.85128 * 180.02562 * 4 3 2 21 21 C 1.38236 * 120.00196 * 0.02562 * 20 4 3 22 22 N 1.48004 * 119.92915 * 180.02562 * 21 20 4 23 23 O 1.21800 * 119.99783 * 359.97438 * 22 21 20 24 24 O 1.21800 * 120.00594 * 180.02562 * 22 21 20 25 25 C 1.38249 * 120.14650 * 359.97438 * 21 20 4 26 26 C 1.50709 * 119.92868 * 180.02562 * 25 21 20 27 27 O 1.42902 * 109.46840 * 74.99992 * 26 25 21 28 28 Si 1.86299 * 109.47201 * 195.00355 * 26 25 21 29 29 C 1.38243 * 120.14768 * 0.02562 * 25 21 20 30 30 H 1.08999 * 109.46682 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.47532 * 299.99717 * 1 2 3 32 32 H 1.09004 * 109.46858 * 60.00214 * 1 2 3 33 33 H 1.09003 * 109.47330 * 299.99734 * 6 5 4 34 34 H 1.08997 * 109.47218 * 60.00351 * 6 5 4 35 35 H 1.08999 * 109.47311 * 89.99739 * 10 9 7 36 36 H 1.08998 * 109.46712 * 209.99726 * 10 9 7 37 37 H 1.09001 * 109.47340 * 329.99512 * 10 9 7 38 38 H 1.09005 * 113.61125 * 254.52698 * 13 11 9 39 39 H 1.09004 * 113.61667 * 25.34169 * 13 11 9 40 40 H 0.97003 * 119.99614 * 0.02562 * 17 16 14 41 41 H 0.97001 * 119.99902 * 180.02562 * 17 16 14 42 42 H 1.08996 * 113.61952 * 270.88767 * 19 14 13 43 43 H 1.09003 * 113.61333 * 139.98554 * 19 14 13 44 44 H 1.08002 * 119.99820 * 179.97438 * 20 4 3 45 45 H 1.08997 * 109.47032 * 315.00408 * 26 25 21 46 46 H 0.96695 * 114.00228 * 60.00506 * 27 26 25 47 47 H 1.48496 * 109.99761 * 180.02562 * 28 26 25 48 48 H 1.48501 * 109.99648 * 301.31644 * 28 26 25 49 49 H 1.08000 * 119.99728 * 180.26931 * 29 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2864 0.0005 5 8 4.1795 0.1477 0.0001 6 6 5.6003 0.3008 0.0001 7 6 6.2519 -1.0580 0.0001 8 8 5.5670 -2.0589 -0.0003 9 7 7.5957 -1.1610 -0.0003 10 6 8.4230 0.0481 -0.0004 11 6 8.2291 -2.4820 0.0003 12 1 7.5238 -3.2895 0.1961 13 6 9.1304 -2.7335 -1.2201 14 6 10.1095 -3.4240 -0.2560 15 1 9.9192 -4.4897 -0.1296 16 6 11.5568 -3.1182 -0.5441 17 7 12.5251 -3.6565 0.2235 18 8 11.8503 -2.3869 -1.4661 19 6 9.5039 -2.5535 0.8576 20 6 4.0602 2.5235 0.0011 21 6 3.3028 3.6799 0.0016 22 7 3.9713 5.0004 0.0016 23 8 5.1874 5.0673 0.0016 24 8 3.3053 6.0202 0.0025 25 6 1.9223 3.6057 0.0011 26 6 1.1014 4.8696 0.0011 27 8 1.1349 5.4593 -1.3002 28 14 -0.6598 4.4662 0.4550 29 6 1.2932 2.3748 0.0005 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 5.9065 0.8510 -0.8897 34 1 5.9065 0.8502 0.8903 35 1 8.6285 0.3478 1.0273 36 1 9.3625 -0.1546 -0.5145 37 1 7.8935 0.8506 -0.5139 38 1 8.6920 -3.4088 -1.9549 39 1 9.5256 -1.8210 -1.6666 40 1 12.2903 -4.2411 0.9612 41 1 13.4566 -3.4594 0.0383 42 1 10.0022 -1.5920 0.9801 43 1 9.3669 -3.0835 1.8002 44 1 5.1385 2.5842 0.0019 45 1 1.5127 5.5700 0.7280 46 1 0.7833 4.8908 -1.9988 47 1 -1.4798 5.7043 0.4579 48 1 -1.2217 3.4877 -0.5104 49 1 0.2146 2.3197 -0.0043 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12311536_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:05 Heat of formation + Delta-G solvation = -93.966048 kcal Electronic energy + Delta-G solvation = -37814.430626 eV Core-core repulsion = 32521.910839 eV Total energy + Delta-G solvation = -5292.519786 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.155 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -43.22426 -42.17907 -41.83494 -40.75426 -39.75669 -39.27921 -38.50453 -37.55759 -37.12599 -35.74204 -34.66557 -32.71498 -32.56986 -30.23597 -29.03787 -28.49842 -27.86410 -27.05019 -26.85956 -25.75962 -23.99516 -23.22465 -22.53164 -20.79465 -20.74696 -20.28948 -19.65861 -19.53493 -18.97230 -18.55773 -18.45825 -18.19078 -17.98473 -17.88746 -17.65733 -17.41592 -17.10469 -16.80144 -16.59977 -16.54786 -16.21625 -15.98366 -15.70314 -15.31830 -15.16920 -14.96460 -14.57972 -14.47581 -14.37568 -13.98841 -13.86173 -13.65405 -13.58943 -13.43059 -13.27718 -13.16124 -12.72650 -12.59135 -12.54146 -12.52926 -12.25540 -12.24408 -12.16034 -11.92274 -11.81927 -11.62901 -11.03685 -10.86256 -10.75917 -10.67699 -10.54859 -9.87188 -9.52813 -5.18308 -1.21034 -0.50465 0.33648 0.44627 1.01501 1.09022 1.31259 1.32147 1.53446 1.71645 1.78259 1.87840 2.04382 2.48903 2.91004 2.99291 3.12563 3.19480 3.26530 3.29426 3.33128 3.42366 3.53437 3.60650 3.65169 3.67608 3.80314 3.85626 3.88983 3.92932 3.98370 4.04183 4.17329 4.24083 4.26460 4.34961 4.38160 4.40372 4.50177 4.54780 4.58376 4.62663 4.68414 4.85530 5.01028 5.27699 5.46785 5.49436 5.70451 5.92203 6.07697 6.24537 6.26785 6.80378 6.90385 7.19173 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.284 6.284 3 C 0.170 3.830 4 C 0.110 3.890 5 O -0.265 6.265 6 C 0.033 3.967 7 C 0.521 3.479 8 O -0.508 6.508 9 N -0.601 5.601 10 C 0.064 3.936 11 C 0.124 3.876 12 H 0.128 0.872 13 C -0.130 4.130 14 C -0.138 4.138 15 H 0.121 0.879 16 C 0.528 3.472 17 N -0.854 5.854 18 O -0.540 6.540 19 C -0.132 4.132 20 C -0.118 4.118 21 C -0.024 4.024 22 N 0.032 4.968 23 O -0.175 6.175 24 O -0.129 6.129 25 C -0.040 4.040 26 C -0.083 4.083 27 O -0.504 6.504 28 Si 0.686 3.314 29 C -0.185 4.185 30 H 0.114 0.886 31 H 0.067 0.933 32 H 0.061 0.939 33 H 0.100 0.900 34 H 0.100 0.900 35 H 0.066 0.934 36 H 0.084 0.916 37 H 0.075 0.925 38 H 0.082 0.918 39 H 0.102 0.898 40 H 0.403 0.597 41 H 0.403 0.597 42 H 0.094 0.906 43 H 0.086 0.914 44 H 0.166 0.834 45 H 0.143 0.857 46 H 0.370 0.630 47 H -0.245 1.245 48 H -0.257 1.257 49 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.602 -5.056 5.108 7.212 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.195 6.195 3 C 0.122 3.878 4 C 0.063 3.937 5 O -0.177 6.177 6 C -0.046 4.046 7 C 0.307 3.693 8 O -0.382 6.382 9 N -0.336 5.336 10 C -0.079 4.079 11 C 0.021 3.979 12 H 0.145 0.855 13 C -0.169 4.169 14 C -0.160 4.160 15 H 0.138 0.862 16 C 0.313 3.687 17 N -0.417 5.417 18 O -0.416 6.416 19 C -0.171 4.171 20 C -0.138 4.138 21 C -0.107 4.107 22 N 0.551 4.449 23 O -0.385 6.385 24 O -0.349 6.349 25 C -0.042 4.042 26 C -0.192 4.192 27 O -0.309 6.309 28 Si 0.586 3.414 29 C -0.204 4.204 30 H 0.132 0.868 31 H 0.085 0.915 32 H 0.080 0.920 33 H 0.117 0.883 34 H 0.118 0.882 35 H 0.084 0.916 36 H 0.103 0.897 37 H 0.094 0.906 38 H 0.101 0.899 39 H 0.120 0.880 40 H 0.231 0.769 41 H 0.233 0.767 42 H 0.113 0.887 43 H 0.105 0.895 44 H 0.183 0.817 45 H 0.160 0.840 46 H 0.217 0.783 47 H -0.169 1.169 48 H -0.182 1.182 49 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -1.836 -5.655 4.549 7.486 hybrid contribution 0.964 0.330 -0.891 1.354 sum -0.872 -5.324 3.657 6.518 Atomic orbital electron populations 1.23392 0.76896 1.05679 1.02037 1.86341 1.22372 1.24291 1.86530 1.18443 0.89017 0.85877 0.94508 1.17857 0.88404 0.85347 1.02098 1.86331 1.16932 1.26079 1.88376 1.22735 0.80027 0.97338 1.04463 1.19848 0.82227 0.90160 0.77029 1.90788 1.62172 1.37876 1.47342 1.47661 1.04809 1.07429 1.73680 1.21986 0.96947 0.86168 1.02764 1.22648 0.93220 0.85439 0.96585 0.85452 1.23373 0.94625 1.02057 0.96796 1.22559 0.91485 1.02046 0.99913 0.86152 1.20357 0.87768 0.79198 0.81403 1.43904 1.09974 1.52506 1.35304 1.90770 1.83788 1.36856 1.30213 1.23379 0.95558 1.00623 0.97501 1.20794 1.02167 0.88982 1.01873 1.20388 0.91945 0.83141 1.15272 1.43373 1.00982 1.02595 0.97936 1.94543 0.95798 1.93713 1.54434 1.94576 1.64501 1.24076 1.51777 1.20000 0.91518 0.96874 0.95799 1.25420 1.09403 0.94079 0.90326 1.86813 1.84757 1.43902 1.15392 0.95261 0.74250 0.82157 0.89774 1.21107 1.01299 0.89710 1.08319 0.86762 0.91456 0.91997 0.88261 0.88186 0.91557 0.89704 0.90609 0.89949 0.87977 0.76881 0.76654 0.88733 0.89507 0.81690 0.84007 0.78294 1.16857 1.18224 0.81970 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.28 -0.17 10.28 -34.23 -0.35 -0.52 16 3 C 0.17 0.03 6.70 -39.12 -0.26 -0.23 16 4 C 0.11 0.08 6.70 -39.12 -0.26 -0.19 16 5 O -0.27 -0.52 9.45 -47.34 -0.45 -0.96 16 6 C 0.03 -0.04 3.77 36.01 0.14 0.10 16 7 C 0.52 0.63 7.75 -10.98 -0.09 0.55 16 8 O -0.51 -2.83 15.98 -14.35 -0.23 -3.06 16 9 N -0.60 0.71 3.08 -173.00 -0.53 0.18 16 10 C 0.06 -0.24 8.84 59.85 0.53 0.29 16 11 C 0.12 -0.17 4.21 -67.12 -0.28 -0.46 16 12 H 0.13 -0.04 7.23 -51.93 -0.38 -0.41 16 13 C -0.13 0.13 6.94 -25.92 -0.18 -0.05 16 14 C -0.14 0.35 4.15 -90.96 -0.38 -0.02 16 15 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 16 C 0.53 -0.13 7.63 -10.98 -0.08 -0.21 16 17 N -0.85 2.87 8.87 31.22 0.28 3.15 16 18 O -0.54 -2.37 16.74 5.56 0.09 -2.28 16 19 C -0.13 0.44 7.06 -25.92 -0.18 0.25 16 20 C -0.12 0.00 8.54 -39.46 -0.34 -0.34 16 21 C -0.02 -0.03 6.84 -79.95 -0.55 -0.58 16 22 N 0.03 0.13 4.45 33.96 0.15 0.28 16 23 O -0.17 -0.83 18.44 -29.46 -0.54 -1.37 16 24 O -0.13 -0.66 14.62 -35.96 -0.53 -1.19 16 25 C -0.04 0.00 5.26 -104.61 -0.55 -0.55 16 26 C -0.08 0.01 1.74 36.01 0.06 0.08 16 27 O -0.50 -0.69 11.80 -55.46 -0.65 -1.34 16 28 Si 0.69 -1.55 30.25 -169.99 -5.14 -6.69 16 29 C -0.19 0.27 7.64 -39.46 -0.30 -0.03 16 30 H 0.11 -0.52 8.14 -51.93 -0.42 -0.94 16 31 H 0.07 -0.35 7.67 -51.93 -0.40 -0.75 16 32 H 0.06 -0.27 7.66 -51.93 -0.40 -0.67 16 33 H 0.10 -0.34 6.92 -51.93 -0.36 -0.70 16 34 H 0.10 -0.37 7.63 -51.93 -0.40 -0.77 16 35 H 0.07 -0.33 8.14 -51.93 -0.42 -0.75 16 36 H 0.08 -0.29 6.34 -51.93 -0.33 -0.62 16 37 H 0.08 -0.39 6.44 -51.93 -0.33 -0.73 16 38 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 39 H 0.10 0.03 6.22 -51.93 -0.32 -0.30 16 40 H 0.40 -2.49 8.83 -40.82 -0.36 -2.85 16 41 H 0.40 -1.42 8.93 -40.82 -0.36 -1.79 16 42 H 0.09 -0.30 6.67 -51.93 -0.35 -0.65 16 43 H 0.09 -0.38 8.14 -51.93 -0.42 -0.80 16 44 H 0.17 -0.32 5.85 -52.49 -0.31 -0.62 16 45 H 0.14 0.07 6.07 -51.93 -0.32 -0.24 16 46 H 0.37 -0.78 8.70 45.56 0.40 -0.38 16 47 H -0.24 -0.27 7.11 56.52 0.40 0.13 16 48 H -0.26 0.46 6.68 56.52 0.38 0.83 16 49 H 0.16 -0.59 3.09 -52.49 -0.16 -0.75 16 LS Contribution 406.31 15.07 6.12 6.12 Total: 0.00 -14.11 406.31 -9.22 -23.33 By element: Atomic # 1 Polarization: -9.49 SS G_CDS: -5.71 Total: -15.20 kcal Atomic # 6 Polarization: 1.29 SS G_CDS: -1.73 Total: -0.44 kcal Atomic # 7 Polarization: 3.71 SS G_CDS: -0.11 Total: 3.61 kcal Atomic # 8 Polarization: -8.07 SS G_CDS: -2.66 Total: -10.73 kcal Atomic # 14 Polarization: -1.55 SS G_CDS: -5.14 Total: -6.69 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -14.11 -9.22 -23.33 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12311536_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.635 kcal (2) G-P(sol) polarization free energy of solvation -14.108 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.743 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.223 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.331 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.966 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds