Wall clock time and date at job start Tue Mar 9 2021 12:52:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35996 * 116.99936 * 2 1 4 4 C 1.39154 * 120.07410 * 179.97438 * 3 2 1 5 5 O 1.35993 * 120.07187 * 0.04929 * 4 3 2 6 6 C 1.42900 * 116.99644 * 179.97438 * 5 4 3 7 7 C 1.50701 * 109.46721 * 179.97438 * 6 5 4 8 8 O 1.21276 * 120.00200 * 0.02562 * 7 6 5 9 9 N 1.34780 * 120.00044 * 179.97438 * 7 6 5 10 10 C 1.46504 * 119.99660 * 0.02562 * 9 7 6 11 11 C 1.46493 * 120.00090 * 179.97438 * 9 7 6 12 12 H 1.08998 * 112.85332 * 348.80792 * 11 9 7 13 13 C 1.53784 * 113.61280 * 120.00941 * 11 9 7 14 14 C 1.53779 * 87.08183 * 139.98175 * 13 11 9 15 15 H 1.08993 * 113.61724 * 89.11938 * 14 13 11 16 16 C 1.50705 * 113.60948 * 219.92890 * 14 13 11 17 17 N 1.34778 * 119.99975 * 179.97438 * 16 14 13 18 18 O 1.21280 * 120.00296 * 0.02562 * 16 14 13 19 19 C 1.53774 * 87.08216 * 334.56312 * 14 13 11 20 20 C 1.38566 * 119.85128 * 180.02562 * 4 3 2 21 21 C 1.38236 * 120.00196 * 0.02562 * 20 4 3 22 22 N 1.48004 * 119.92915 * 180.02562 * 21 20 4 23 23 O 1.21800 * 119.99783 * 359.97438 * 22 21 20 24 24 O 1.21800 * 120.00594 * 180.02562 * 22 21 20 25 25 C 1.38249 * 120.14650 * 359.97438 * 21 20 4 26 26 C 1.50709 * 119.92868 * 180.02562 * 25 21 20 27 27 O 1.42902 * 109.46840 * 74.99992 * 26 25 21 28 28 Si 1.86299 * 109.47201 * 195.00355 * 26 25 21 29 29 C 1.38243 * 120.14768 * 0.02562 * 25 21 20 30 30 H 1.08999 * 109.46682 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.47532 * 299.99717 * 1 2 3 32 32 H 1.09004 * 109.46858 * 60.00214 * 1 2 3 33 33 H 1.09003 * 109.47330 * 299.99734 * 6 5 4 34 34 H 1.08997 * 109.47218 * 60.00351 * 6 5 4 35 35 H 1.08999 * 109.47311 * 89.99739 * 10 9 7 36 36 H 1.08998 * 109.46712 * 209.99726 * 10 9 7 37 37 H 1.09001 * 109.47340 * 329.99512 * 10 9 7 38 38 H 1.09005 * 113.61125 * 254.52698 * 13 11 9 39 39 H 1.09004 * 113.61667 * 25.34169 * 13 11 9 40 40 H 0.97003 * 119.99614 * 0.02562 * 17 16 14 41 41 H 0.97001 * 119.99902 * 180.02562 * 17 16 14 42 42 H 1.08996 * 113.61952 * 270.88767 * 19 14 13 43 43 H 1.09003 * 113.61333 * 139.98554 * 19 14 13 44 44 H 1.08002 * 119.99820 * 179.97438 * 20 4 3 45 45 H 1.08997 * 109.47032 * 315.00408 * 26 25 21 46 46 H 0.96695 * 114.00228 * 60.00506 * 27 26 25 47 47 H 1.48496 * 109.99761 * 180.02562 * 28 26 25 48 48 H 1.48501 * 109.99648 * 301.31644 * 28 26 25 49 49 H 1.08000 * 119.99728 * 180.26931 * 29 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2864 0.0005 5 8 4.1795 0.1477 0.0001 6 6 5.6003 0.3008 0.0001 7 6 6.2519 -1.0580 0.0001 8 8 5.5670 -2.0589 -0.0003 9 7 7.5957 -1.1610 -0.0003 10 6 8.4230 0.0481 -0.0004 11 6 8.2291 -2.4820 0.0003 12 1 7.5238 -3.2895 0.1961 13 6 9.1304 -2.7335 -1.2201 14 6 10.1095 -3.4240 -0.2560 15 1 9.9192 -4.4897 -0.1296 16 6 11.5568 -3.1182 -0.5441 17 7 12.5251 -3.6565 0.2235 18 8 11.8503 -2.3869 -1.4661 19 6 9.5039 -2.5535 0.8576 20 6 4.0602 2.5235 0.0011 21 6 3.3028 3.6799 0.0016 22 7 3.9713 5.0004 0.0016 23 8 5.1874 5.0673 0.0016 24 8 3.3053 6.0202 0.0025 25 6 1.9223 3.6057 0.0011 26 6 1.1014 4.8696 0.0011 27 8 1.1349 5.4593 -1.3002 28 14 -0.6598 4.4662 0.4550 29 6 1.2932 2.3748 0.0005 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 5.9065 0.8510 -0.8897 34 1 5.9065 0.8502 0.8903 35 1 8.6285 0.3478 1.0273 36 1 9.3625 -0.1546 -0.5145 37 1 7.8935 0.8506 -0.5139 38 1 8.6920 -3.4088 -1.9549 39 1 9.5256 -1.8210 -1.6666 40 1 12.2903 -4.2411 0.9612 41 1 13.4566 -3.4594 0.0383 42 1 10.0022 -1.5920 0.9801 43 1 9.3669 -3.0835 1.8002 44 1 5.1385 2.5842 0.0019 45 1 1.5127 5.5700 0.7280 46 1 0.7833 4.8908 -1.9988 47 1 -1.4798 5.7043 0.4579 48 1 -1.2217 3.4877 -0.5104 49 1 0.2146 2.3197 -0.0043 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12311536_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:04 Heat of formation + Delta-G solvation = -100.139324 kcal Electronic energy + Delta-G solvation = -37814.698319 eV Core-core repulsion = 32521.910839 eV Total energy + Delta-G solvation = -5292.787480 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.155 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -43.39046 -42.18458 -41.77940 -40.74922 -39.72672 -39.27123 -38.52022 -37.72179 -37.23383 -35.70366 -34.58418 -32.70268 -32.55767 -30.17571 -28.84104 -28.30596 -27.92266 -26.91877 -26.72814 -25.76988 -23.97153 -23.25334 -22.46488 -20.81985 -20.71778 -20.16665 -19.77889 -19.54457 -18.95933 -18.66542 -18.47485 -18.19799 -17.89713 -17.82592 -17.61810 -17.36705 -16.98554 -16.74446 -16.49567 -16.45429 -16.20012 -15.89076 -15.64501 -15.29696 -15.13863 -14.87000 -14.52039 -14.36966 -14.28648 -13.90730 -13.79188 -13.56121 -13.47986 -13.29656 -13.11272 -13.05956 -12.70030 -12.50579 -12.48435 -12.39737 -12.37862 -12.24671 -12.16638 -12.11042 -11.70699 -11.67284 -11.09133 -10.88303 -10.66364 -10.64985 -10.49280 -9.79851 -9.50788 -5.00330 -1.35412 -0.44866 0.17187 0.31334 1.13162 1.17478 1.30124 1.46539 1.58087 1.86602 1.87703 1.93625 2.14724 2.65144 2.96928 3.08575 3.21762 3.27762 3.36277 3.41198 3.45104 3.47670 3.68216 3.78467 3.83737 3.87873 3.91745 4.03897 4.09052 4.14200 4.24566 4.26515 4.32028 4.37528 4.51477 4.55492 4.59276 4.61437 4.66798 4.71221 4.76351 4.80424 4.89247 4.93846 5.14291 5.27168 5.39026 5.58609 5.87914 6.02741 6.15897 6.42758 6.46396 6.49273 6.90410 7.33513 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.001 4.001 2 O -0.306 6.306 3 C 0.170 3.830 4 C 0.101 3.899 5 O -0.290 6.290 6 C 0.029 3.971 7 C 0.516 3.484 8 O -0.563 6.563 9 N -0.595 5.595 10 C 0.057 3.943 11 C 0.118 3.882 12 H 0.115 0.885 13 C -0.134 4.134 14 C -0.129 4.129 15 H 0.143 0.857 16 C 0.525 3.475 17 N -0.837 5.837 18 O -0.594 6.594 19 C -0.116 4.116 20 C -0.110 4.110 21 C -0.042 4.042 22 N 0.036 4.964 23 O -0.188 6.188 24 O -0.161 6.161 25 C -0.034 4.034 26 C -0.103 4.103 27 O -0.529 6.529 28 Si 0.776 3.224 29 C -0.172 4.172 30 H 0.123 0.877 31 H 0.090 0.910 32 H 0.074 0.926 33 H 0.122 0.878 34 H 0.129 0.871 35 H 0.084 0.916 36 H 0.080 0.920 37 H 0.092 0.908 38 H 0.073 0.927 39 H 0.088 0.912 40 H 0.419 0.581 41 H 0.405 0.595 42 H 0.097 0.903 43 H 0.105 0.895 44 H 0.182 0.818 45 H 0.129 0.871 46 H 0.383 0.617 47 H -0.295 1.295 48 H -0.250 1.250 49 H 0.188 0.812 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.076 -5.941 6.190 8.647 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 O -0.218 6.218 3 C 0.121 3.879 4 C 0.054 3.946 5 O -0.203 6.203 6 C -0.049 4.049 7 C 0.304 3.696 8 O -0.441 6.441 9 N -0.328 5.328 10 C -0.085 4.085 11 C 0.015 3.985 12 H 0.133 0.867 13 C -0.173 4.173 14 C -0.151 4.151 15 H 0.161 0.839 16 C 0.310 3.690 17 N -0.400 5.400 18 O -0.474 6.474 19 C -0.155 4.155 20 C -0.129 4.129 21 C -0.126 4.126 22 N 0.549 4.451 23 O -0.398 6.398 24 O -0.376 6.376 25 C -0.036 4.036 26 C -0.210 4.210 27 O -0.336 6.336 28 Si 0.677 3.323 29 C -0.190 4.190 30 H 0.141 0.859 31 H 0.108 0.892 32 H 0.093 0.907 33 H 0.140 0.860 34 H 0.146 0.854 35 H 0.103 0.897 36 H 0.099 0.901 37 H 0.111 0.889 38 H 0.092 0.908 39 H 0.106 0.894 40 H 0.250 0.750 41 H 0.236 0.764 42 H 0.115 0.885 43 H 0.124 0.876 44 H 0.199 0.801 45 H 0.146 0.854 46 H 0.232 0.768 47 H -0.222 1.222 48 H -0.175 1.175 49 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges -2.251 -6.535 5.661 8.934 hybrid contribution 1.146 0.543 -1.230 1.767 sum -1.105 -5.992 4.430 7.533 Atomic orbital electron populations 1.23753 0.74925 1.06986 1.03753 1.86329 1.24584 1.24612 1.86271 1.18658 0.89124 0.86326 0.93759 1.17963 0.88762 0.85136 1.02761 1.86299 1.18361 1.26907 1.88703 1.22957 0.78792 0.96268 1.06837 1.20312 0.82677 0.90470 0.76159 1.90755 1.63429 1.39660 1.50261 1.47766 1.04457 1.08361 1.72228 1.22217 0.96563 0.85503 1.04175 1.22653 0.93502 0.85292 0.97078 0.86749 1.23337 0.95356 1.01590 0.97064 1.22577 0.89709 1.03328 0.99452 0.83900 1.20713 0.88932 0.78497 0.80836 1.43809 1.09682 1.51602 1.34912 1.90748 1.84615 1.39421 1.32628 1.23307 0.93706 1.00771 0.97679 1.20887 1.02945 0.88191 1.00902 1.20522 0.92677 0.81943 1.17502 1.43690 1.00825 1.03375 0.97215 1.94508 0.96496 1.94101 1.54725 1.94575 1.64444 1.25338 1.53230 1.20101 0.90969 0.97398 0.95108 1.25798 1.11764 0.93763 0.89633 1.86773 1.85393 1.45018 1.16435 0.94242 0.70079 0.79734 0.88259 1.21222 1.02228 0.88373 1.07211 0.85902 0.89189 0.90750 0.86012 0.85388 0.89720 0.90084 0.88900 0.90783 0.89392 0.74996 0.76391 0.88507 0.87626 0.80096 0.85361 0.76809 1.22203 1.17490 0.79550 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.01 9.81 113.37 1.11 1.12 16 2 O -0.31 -0.17 10.28 -79.64 -0.82 -0.99 16 3 C 0.17 -0.06 6.70 22.57 0.15 0.09 16 4 C 0.10 0.11 6.70 22.57 0.15 0.27 16 5 O -0.29 -1.19 9.45 -67.05 -0.63 -1.83 16 6 C 0.03 -0.08 3.77 71.24 0.27 0.19 16 7 C 0.52 1.61 7.75 87.66 0.68 2.29 16 8 O -0.56 -7.30 15.98 16.02 0.26 -7.04 16 9 N -0.60 1.25 3.08 -819.63 -2.53 -1.28 16 10 C 0.06 -0.47 8.84 127.77 1.13 0.66 16 11 C 0.12 -0.26 4.21 45.52 0.19 -0.07 16 12 H 0.11 0.08 7.23 -2.39 -0.02 0.07 16 13 C -0.13 0.12 6.94 31.12 0.22 0.34 16 14 C -0.13 0.69 4.15 -11.02 -0.05 0.64 16 15 H 0.14 -1.41 8.14 -2.39 -0.02 -1.43 16 16 C 0.52 -0.20 7.63 87.66 0.67 0.47 16 17 N -0.84 6.23 8.87 -173.53 -1.54 4.69 16 18 O -0.59 -5.94 16.74 -3.03 -0.05 -6.00 16 19 C -0.12 0.85 7.06 31.12 0.22 1.07 16 20 C -0.11 0.03 8.54 22.35 0.19 0.22 16 21 C -0.04 -0.13 6.84 36.38 0.25 0.11 16 22 N 0.04 0.32 4.45 -46.47 -0.21 0.12 16 23 O -0.19 -1.96 18.44 18.89 0.35 -1.61 16 24 O -0.16 -1.95 14.62 25.10 0.37 -1.59 16 25 C -0.03 0.02 5.26 -19.86 -0.10 -0.09 16 26 C -0.10 0.01 1.74 71.24 0.12 0.13 16 27 O -0.53 -1.83 11.80 -129.63 -1.53 -3.36 16 28 Si 0.78 -4.34 30.25 68.60 2.07 -2.27 16 29 C -0.17 0.73 7.64 22.35 0.17 0.90 16 30 H 0.12 -1.28 8.14 -2.39 -0.02 -1.30 16 31 H 0.09 -1.17 7.67 -2.39 -0.02 -1.19 16 32 H 0.07 -0.81 7.66 -2.38 -0.02 -0.83 16 33 H 0.12 -0.93 6.92 -2.39 -0.02 -0.95 16 34 H 0.13 -1.12 7.63 -2.39 -0.02 -1.14 16 35 H 0.08 -0.96 8.14 -2.39 -0.02 -0.98 16 36 H 0.08 -0.54 6.34 -2.39 -0.02 -0.56 16 37 H 0.09 -1.07 6.44 -2.39 -0.02 -1.09 16 38 H 0.07 0.02 8.14 -2.38 -0.02 0.00 16 39 H 0.09 0.20 6.22 -2.39 -0.01 0.18 16 40 H 0.42 -5.81 8.83 -92.71 -0.82 -6.63 16 41 H 0.41 -3.04 8.93 -92.71 -0.83 -3.87 16 42 H 0.10 -0.71 6.67 -2.39 -0.02 -0.73 16 43 H 0.11 -1.12 8.14 -2.39 -0.02 -1.14 16 44 H 0.18 -0.83 5.85 -2.91 -0.02 -0.85 16 45 H 0.13 0.31 6.07 -2.39 -0.01 0.30 16 46 H 0.38 -1.57 8.70 -74.06 -0.64 -2.22 16 47 H -0.29 -0.85 7.11 99.48 0.71 -0.14 16 48 H -0.25 1.65 6.68 99.48 0.66 2.32 16 49 H 0.19 -1.83 3.09 -2.91 -0.01 -1.84 16 Total: 0.00 -36.70 406.31 -0.09 -36.79 By element: Atomic # 1 Polarization: -22.80 SS G_CDS: -1.21 Total: -24.00 kcal Atomic # 6 Polarization: 2.99 SS G_CDS: 5.37 Total: 8.36 kcal Atomic # 7 Polarization: 7.80 SS G_CDS: -4.27 Total: 3.52 kcal Atomic # 8 Polarization: -20.34 SS G_CDS: -2.06 Total: -22.41 kcal Atomic # 14 Polarization: -4.34 SS G_CDS: 2.07 Total: -2.27 kcal Total: -36.70 -0.09 -36.79 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12311536_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.350 kcal (2) G-P(sol) polarization free energy of solvation -36.695 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.046 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.094 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.789 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.139 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds