Wall clock time and date at job start Tue Mar 9 2021 12:52:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.34779 * 120.00374 * 2 1 4 4 O 1.21275 * 120.00245 * 179.97438 * 3 2 1 5 5 C 1.50706 * 119.99562 * 359.97438 * 3 2 1 6 6 O 1.42902 * 109.46620 * 180.02562 * 5 3 2 7 7 C 1.35905 * 116.99329 * 180.02562 * 6 5 3 8 8 C 1.38718 * 120.04895 * 179.97438 * 7 6 5 9 9 N 1.48000 * 120.03208 * 0.02562 * 8 7 6 10 10 O 1.21796 * 119.99969 * 179.97438 * 9 8 7 11 11 O 1.21801 * 119.99623 * 359.97438 * 9 8 7 12 12 C 1.38168 * 119.94011 * 180.02562 * 8 7 6 13 13 C 1.38247 * 120.05694 * 359.97438 * 12 8 7 14 14 C 1.50692 * 119.94402 * 179.97438 * 13 12 8 15 15 O 1.42894 * 109.47628 * 300.00750 * 14 13 12 16 16 Si 1.86304 * 109.47316 * 180.02562 * 14 13 12 17 17 C 1.38295 * 120.10750 * 359.75206 * 13 12 8 18 18 C 1.38113 * 120.05697 * 0.50062 * 17 13 12 19 19 C 1.46505 * 119.99944 * 179.97438 * 2 1 3 20 20 H 1.09000 * 112.84580 * 185.47489 * 19 2 1 21 21 C 1.53774 * 113.61736 * 316.67822 * 19 2 1 22 22 C 1.53947 * 87.02204 * 139.94573 * 21 19 2 23 23 H 1.09005 * 113.53418 * 89.18777 * 22 21 19 24 24 C 1.50696 * 113.74469 * 220.05153 * 22 21 19 25 25 N 1.34772 * 120.00672 * 277.60104 * 24 22 21 26 26 O 1.21289 * 119.99742 * 97.60245 * 24 22 21 27 27 C 1.53780 * 87.11329 * 334.63559 * 22 21 19 28 28 H 1.09006 * 109.47116 * 94.98403 * 1 2 3 29 29 H 1.08997 * 109.47486 * 214.98327 * 1 2 3 30 30 H 1.09001 * 109.47351 * 334.99195 * 1 2 3 31 31 H 1.08998 * 109.46695 * 60.01056 * 5 3 2 32 32 H 1.08991 * 109.47357 * 300.00491 * 5 3 2 33 33 H 1.08002 * 119.97234 * 180.02562 * 12 8 7 34 34 H 1.09006 * 109.46840 * 60.00602 * 14 13 12 35 35 H 0.96698 * 113.99923 * 299.99841 * 15 14 13 36 36 H 1.48490 * 110.00331 * 180.02562 * 16 14 13 37 37 H 1.48499 * 109.99847 * 301.32672 * 16 14 13 38 38 H 1.08005 * 119.96377 * 180.25241 * 17 13 12 39 39 H 1.08000 * 120.03079 * 179.77388 * 18 17 13 40 40 H 1.08997 * 113.61293 * 254.52836 * 21 19 2 41 41 H 1.09008 * 113.61504 * 25.42403 * 21 19 2 42 42 H 0.97010 * 119.99606 * 359.97438 * 25 24 22 43 43 H 0.97000 * 120.00408 * 180.02562 * 25 24 22 44 44 H 1.09000 * 113.61516 * 270.81225 * 27 22 21 45 45 H 1.09000 * 113.68754 * 139.91382 * 27 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3517 1.1671 0.0005 5 6 1.3854 2.4723 -0.0006 6 8 2.3141 3.5584 -0.0011 7 6 1.7946 4.8143 -0.0011 8 6 2.6386 5.9151 -0.0010 9 7 4.1061 5.7233 -0.0015 10 8 4.8466 6.6903 -0.0019 11 8 4.5732 4.5984 -0.0015 12 6 2.1080 7.1909 -0.0005 13 6 0.7373 7.3707 -0.0006 14 6 0.1614 8.7632 0.0006 15 8 0.6016 9.4599 1.1679 16 14 -1.6991 8.6658 0.0009 17 6 -0.1062 6.2747 -0.0064 18 6 0.4192 4.9975 -0.0016 19 6 2.1975 -1.2688 0.0006 20 1 3.2750 -1.1353 0.0963 21 6 1.6178 -2.3144 0.9677 22 6 1.8962 -3.3621 -0.1253 23 1 2.8915 -3.8022 -0.0630 24 6 0.8078 -4.3946 -0.2675 25 7 0.7751 -5.4578 0.5601 26 8 -0.0389 -4.2688 -1.1268 27 6 1.7930 -2.2140 -1.1431 28 1 -0.3634 -0.0893 -1.0238 29 1 -0.3634 -0.8419 0.5892 30 1 -0.3634 0.9313 0.4344 31 1 0.7585 2.5303 0.8892 32 1 0.7590 2.5299 -0.8907 33 1 2.7647 8.0483 -0.0009 34 1 0.4974 9.2961 -0.8890 35 1 0.3377 9.0414 1.9987 36 1 -2.2793 10.0327 0.0014 37 1 -2.1686 7.9156 -1.1916 38 1 -1.1767 6.4179 -0.0106 39 1 -0.2399 4.1419 -0.0025 40 1 2.2144 -2.4534 1.8692 41 1 0.5574 -2.1741 1.1781 42 1 1.4525 -5.5586 1.2472 43 1 0.0747 -6.1226 0.4683 44 1 0.7807 -2.0462 -1.5109 45 1 2.5303 -2.2710 -1.9438 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12311536_4549638.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:09 Heat of formation + Delta-G solvation = -65.467858 kcal Electronic energy + Delta-G solvation = -32894.390143 eV Core-core repulsion = 28077.325942 eV Total energy + Delta-G solvation = -4817.064201 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.140 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -43.02452 -42.04025 -41.55755 -40.57925 -39.58782 -38.50749 -37.52568 -37.12008 -35.74936 -34.67877 -33.50682 -32.38949 -30.34750 -28.54367 -27.60453 -27.16973 -26.92206 -26.55880 -24.19499 -22.89717 -22.47963 -20.79471 -20.50341 -20.28228 -19.45950 -19.21865 -18.73027 -18.35778 -18.32381 -18.12994 -17.96692 -17.76156 -17.33480 -16.83326 -16.58397 -16.48446 -16.27589 -16.14325 -15.73491 -15.34807 -15.24763 -14.93369 -14.62988 -14.46508 -14.18507 -14.02352 -13.93638 -13.70835 -13.51860 -13.27138 -13.16631 -12.58125 -12.52668 -12.41486 -12.22981 -12.19697 -12.12030 -11.84776 -11.83824 -11.73249 -11.02687 -10.93874 -10.85843 -10.77400 -10.77067 -9.91114 -9.86592 -5.31037 -1.13300 -0.38485 0.38078 0.53315 0.99238 1.04084 1.33219 1.35802 1.51932 1.75111 1.93174 1.98056 2.47716 2.93123 2.98120 3.12066 3.19308 3.22497 3.26871 3.31135 3.47654 3.52066 3.54625 3.60199 3.65759 3.70268 3.78220 4.02181 4.12909 4.14843 4.15659 4.30011 4.35082 4.38354 4.42685 4.49357 4.55937 4.63308 4.67284 4.84680 4.91987 5.01746 5.27033 5.45637 5.68862 5.70727 6.06422 6.23259 6.32386 6.92435 6.94093 7.17730 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.065 3.935 2 N -0.603 5.603 3 C 0.517 3.483 4 O -0.495 6.495 5 C 0.032 3.968 6 O -0.254 6.254 7 C 0.200 3.800 8 C -0.075 4.075 9 N 0.029 4.971 10 O -0.177 6.177 11 O -0.118 6.118 12 C 0.009 3.991 13 C -0.158 4.158 14 C -0.066 4.066 15 O -0.535 6.535 16 Si 0.692 3.308 17 C -0.025 4.025 18 C -0.209 4.209 19 C 0.125 3.875 20 H 0.130 0.870 21 C -0.135 4.135 22 C -0.138 4.138 23 H 0.121 0.879 24 C 0.529 3.471 25 N -0.854 5.854 26 O -0.541 6.541 27 C -0.128 4.128 28 H 0.066 0.934 29 H 0.080 0.920 30 H 0.074 0.926 31 H 0.102 0.898 32 H 0.102 0.898 33 H 0.164 0.836 34 H 0.121 0.879 35 H 0.381 0.619 36 H -0.248 1.248 37 H -0.254 1.254 38 H 0.149 0.851 39 H 0.156 0.844 40 H 0.087 0.913 41 H 0.094 0.906 42 H 0.403 0.597 43 H 0.402 0.598 44 H 0.101 0.899 45 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.111 -4.102 4.907 11.132 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.338 5.338 3 C 0.302 3.698 4 O -0.367 6.367 5 C -0.046 4.046 6 O -0.163 6.163 7 C 0.150 3.850 8 C -0.160 4.160 9 N 0.548 4.452 10 O -0.386 6.386 11 O -0.342 6.342 12 C -0.010 4.010 13 C -0.159 4.159 14 C -0.176 4.176 15 O -0.341 6.341 16 Si 0.593 3.407 17 C -0.043 4.043 18 C -0.228 4.228 19 C 0.021 3.979 20 H 0.148 0.852 21 C -0.173 4.173 22 C -0.160 4.160 23 H 0.139 0.861 24 C 0.313 3.687 25 N -0.417 5.417 26 O -0.417 6.417 27 C -0.167 4.167 28 H 0.085 0.915 29 H 0.099 0.901 30 H 0.092 0.908 31 H 0.120 0.880 32 H 0.120 0.880 33 H 0.182 0.818 34 H 0.138 0.862 35 H 0.229 0.771 36 H -0.173 1.173 37 H -0.179 1.179 38 H 0.166 0.834 39 H 0.173 0.827 40 H 0.105 0.895 41 H 0.112 0.888 42 H 0.231 0.769 43 H 0.233 0.767 44 H 0.120 0.880 45 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -9.869 -3.142 3.419 10.907 hybrid contribution 0.613 -0.603 -0.021 0.860 sum -9.257 -3.744 3.398 10.548 Atomic orbital electron populations 1.21963 0.79077 1.03633 1.03051 1.47642 1.07016 1.05089 1.74051 1.19825 0.88134 0.84315 0.77497 1.90849 1.13045 1.86466 1.46343 1.22811 0.92091 0.85259 1.04472 1.86503 1.33457 1.10501 1.85865 1.18697 0.91505 0.84150 0.90606 1.20587 0.80451 0.94083 1.20875 1.43335 1.02559 1.00977 0.98282 1.94556 1.56474 1.32736 1.54790 1.94698 1.78802 1.09421 1.51258 1.20836 0.95816 0.94761 0.89541 1.20316 0.92471 0.96933 1.06212 1.25095 1.11145 0.89452 0.91916 1.86560 1.80355 1.51882 1.15286 0.94909 0.74228 0.83507 0.88020 1.21267 1.00375 0.91322 0.91292 1.21260 0.92138 0.99613 1.09832 1.22655 0.98527 0.80408 0.96273 0.85242 1.23432 1.02906 0.93616 0.97388 1.22583 0.99300 0.94029 1.00085 0.86122 1.20359 0.85849 0.82016 0.80464 1.43908 1.34063 1.26452 1.37269 1.90767 1.40076 1.76458 1.34413 1.23347 1.04257 0.92265 0.96855 0.91502 0.90109 0.90759 0.87991 0.88041 0.81802 0.86159 0.77132 1.17287 1.17912 0.83406 0.82659 0.89462 0.88783 0.76853 0.76676 0.88029 0.89916 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.32 9.40 59.84 0.56 0.24 16 2 N -0.60 1.03 3.09 -173.00 -0.53 0.49 16 3 C 0.52 0.48 7.75 -10.98 -0.09 0.40 16 4 O -0.49 -2.97 15.95 -14.35 -0.23 -3.20 16 5 C 0.03 -0.07 3.70 36.01 0.13 0.07 16 6 O -0.25 -0.57 7.68 -49.80 -0.38 -0.95 16 7 C 0.20 0.13 6.67 -39.22 -0.26 -0.13 16 8 C -0.08 -0.20 6.87 -79.81 -0.55 -0.75 16 9 N 0.03 0.19 4.45 34.03 0.15 0.34 16 10 O -0.18 -1.28 18.45 -29.46 -0.54 -1.82 16 11 O -0.12 -1.01 17.24 -36.49 -0.63 -1.64 16 12 C 0.01 0.00 9.11 -39.60 -0.36 -0.36 16 13 C -0.16 0.34 5.39 -104.60 -0.56 -0.22 16 14 C -0.07 0.17 2.82 36.00 0.10 0.27 16 15 O -0.54 0.91 12.77 -35.23 -0.45 0.46 16 16 Si 0.69 -2.66 29.78 -169.99 -5.06 -7.72 16 17 C -0.02 0.10 8.66 -39.61 -0.34 -0.25 16 18 C -0.21 0.71 9.04 -39.44 -0.36 0.35 16 19 C 0.12 -0.19 4.23 -67.12 -0.28 -0.48 16 20 H 0.13 -0.02 7.18 -51.93 -0.37 -0.39 16 21 C -0.13 0.47 7.17 -25.83 -0.19 0.29 16 22 C -0.14 0.37 4.14 -90.87 -0.38 0.00 16 23 H 0.12 -0.53 8.14 -51.93 -0.42 -0.95 16 24 C 0.53 -0.26 7.64 -10.99 -0.08 -0.35 16 25 N -0.85 3.05 8.87 31.22 0.28 3.33 16 26 O -0.54 -2.18 16.74 5.55 0.09 -2.09 16 27 C -0.13 0.17 7.00 -25.92 -0.18 -0.01 16 28 H 0.07 -0.33 7.99 -51.93 -0.41 -0.75 16 29 H 0.08 -0.41 5.84 -51.93 -0.30 -0.72 16 30 H 0.07 -0.54 6.26 -51.93 -0.33 -0.87 16 31 H 0.10 -0.57 6.94 -51.93 -0.36 -0.93 16 32 H 0.10 -0.51 7.63 -51.93 -0.40 -0.90 16 33 H 0.16 0.09 7.61 -52.49 -0.40 -0.31 16 34 H 0.12 -0.26 7.96 -51.93 -0.41 -0.67 16 35 H 0.38 -2.17 8.70 45.56 0.40 -1.78 16 36 H -0.25 0.01 7.11 56.52 0.40 0.41 16 37 H -0.25 0.50 7.11 56.52 0.40 0.91 16 38 H 0.15 -0.98 4.87 -52.48 -0.26 -1.24 16 39 H 0.16 -1.08 6.30 -52.49 -0.33 -1.41 16 40 H 0.09 -0.38 8.14 -51.93 -0.42 -0.80 16 41 H 0.09 -0.35 5.91 -51.92 -0.31 -0.65 16 42 H 0.40 -2.55 8.83 -40.82 -0.36 -2.91 16 43 H 0.40 -1.53 8.93 -40.82 -0.36 -1.89 16 44 H 0.10 -0.02 6.65 -51.93 -0.35 -0.37 16 45 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 LS Contribution 380.85 15.07 5.74 5.74 Total: 0.00 -15.29 380.85 -9.42 -24.71 By element: Atomic # 1 Polarization: -11.71 SS G_CDS: -5.02 Total: -16.72 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: -2.83 Total: -0.93 kcal Atomic # 7 Polarization: 4.27 SS G_CDS: -0.11 Total: 4.16 kcal Atomic # 8 Polarization: -7.09 SS G_CDS: -2.14 Total: -9.23 kcal Atomic # 14 Polarization: -2.66 SS G_CDS: -5.06 Total: -7.72 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -15.29 -9.42 -24.71 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12311536_4549638.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.759 kcal (2) G-P(sol) polarization free energy of solvation -15.288 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.047 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.421 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.709 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.468 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds