Wall clock time and date at job start Tue Mar 9 2021 12:52:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35983 * 116.99549 * 2 1 4 4 C 1.38685 * 119.99781 * 180.02562 * 3 2 1 5 5 C 1.38143 * 120.00107 * 179.74125 * 4 3 2 6 6 C 1.50701 * 120.00140 * 180.24907 * 5 4 3 7 7 O 1.42899 * 109.47236 * 255.25396 * 6 5 4 8 8 Si 1.86296 * 109.47185 * 15.25550 * 6 5 4 9 9 C 1.38679 * 120.00105 * 0.50706 * 5 4 3 10 10 O 1.35977 * 120.00578 * 179.74506 * 9 5 4 11 11 C 1.42892 * 117.00538 * 179.72558 * 10 9 5 12 12 C 1.50702 * 109.47679 * 179.97438 * 11 10 9 13 13 O 1.21285 * 119.99565 * 0.02562 * 12 11 10 14 14 N 1.34776 * 120.00410 * 179.97438 * 12 11 10 15 15 C 1.46499 * 119.99606 * 0.02562 * 14 12 11 16 16 C 1.46497 * 119.99883 * 180.02562 * 14 12 11 17 17 H 1.08995 * 112.85336 * 354.91641 * 16 14 12 18 18 C 1.53784 * 113.61606 * 126.11722 * 16 14 12 19 19 C 1.53783 * 87.08351 * 140.06213 * 18 16 14 20 20 H 1.08993 * 113.61586 * 89.19717 * 19 18 16 21 21 C 1.50698 * 113.61413 * 220.02182 * 19 18 16 22 22 N 1.34772 * 120.00165 * 178.47390 * 21 19 18 23 23 O 1.21286 * 120.00054 * 358.46895 * 21 19 18 24 24 C 1.53782 * 87.17071 * 334.60886 * 19 18 16 25 25 C 1.38725 * 119.99709 * 359.46906 * 9 5 4 26 26 C 1.38107 * 120.00050 * 0.27802 * 25 9 5 27 27 H 1.09007 * 109.47581 * 300.00493 * 1 2 3 28 28 H 1.08994 * 109.47325 * 60.00691 * 1 2 3 29 29 H 1.09008 * 109.47357 * 180.02562 * 1 2 3 30 30 H 1.07999 * 119.99551 * 0.02562 * 4 3 2 31 31 H 1.09007 * 109.47129 * 135.25520 * 6 5 4 32 32 H 0.96703 * 114.00056 * 179.97438 * 7 6 5 33 33 H 1.48497 * 110.00183 * 300.00220 * 8 6 5 34 34 H 1.48511 * 109.99598 * 61.31775 * 8 6 5 35 35 H 1.09001 * 109.47381 * 59.99824 * 11 10 9 36 36 H 1.08998 * 109.47363 * 300.00020 * 11 10 9 37 37 H 1.08997 * 109.47425 * 274.32500 * 15 14 12 38 38 H 1.08996 * 109.47257 * 34.33224 * 15 14 12 39 39 H 1.09003 * 109.46766 * 154.32868 * 15 14 12 40 40 H 1.09002 * 113.61295 * 25.51256 * 18 16 14 41 41 H 1.08998 * 113.69019 * 254.62545 * 18 16 14 42 42 H 0.96994 * 120.00386 * 179.97438 * 22 21 19 43 43 H 0.97000 * 119.99685 * 359.71649 * 22 21 19 44 44 H 1.09005 * 113.61040 * 139.93998 * 24 19 18 45 45 H 1.09004 * 113.61937 * 270.83884 * 24 19 18 46 46 H 1.07998 * 120.00306 * 180.29980 * 25 9 5 47 47 H 1.07996 * 120.00200 * 179.97438 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2117 0.0000 4 6 3.4312 1.2843 -0.0005 5 6 4.0583 2.5152 -0.0059 6 6 5.5632 2.5941 -0.0122 7 8 6.0262 2.9645 1.2880 8 14 6.2703 0.9333 -0.4733 9 6 3.3031 3.6782 -0.0002 10 8 3.9203 4.8899 -0.0003 11 6 3.0804 6.0459 -0.0003 12 6 3.9345 7.2875 0.0003 13 8 5.1436 7.1917 0.0002 14 7 3.3549 8.5043 -0.0002 15 6 1.8945 8.6198 -0.0006 16 6 4.1853 9.7112 -0.0002 17 1 5.2494 9.4928 0.0891 18 6 3.8505 10.6892 -1.1388 19 6 4.0518 11.8224 -0.1188 20 1 5.0792 12.1821 -0.0629 21 6 3.0474 12.9381 -0.2500 22 7 3.0860 13.9831 0.6003 23 8 2.2042 12.8957 -1.1208 24 6 3.6971 10.7994 0.9733 25 6 1.9177 3.6056 -0.0002 26 6 1.2907 2.3751 0.0000 27 1 -0.3634 0.5139 0.8900 28 1 -0.3634 0.5137 -0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 4.0194 0.3785 -0.0014 31 1 5.8850 3.3404 -0.7387 32 1 6.9882 3.0342 1.3579 33 1 5.8390 -0.0929 0.5094 34 1 5.8218 0.5513 -1.8366 35 1 2.4511 6.0379 0.8897 36 1 2.4511 6.0378 -0.8902 37 1 1.5264 8.5710 -1.0254 38 1 1.4651 7.8027 0.5790 39 1 1.6052 9.5720 0.4443 40 1 2.8258 10.6041 -1.5003 41 1 4.5848 10.6913 -1.9444 42 1 2.4397 14.7014 0.5156 43 1 3.7578 14.0150 1.2992 44 1 4.3086 10.8896 1.8711 45 1 2.6303 10.7445 1.1903 46 1 1.3294 4.5113 -0.0006 47 1 0.2123 2.3185 0.0004 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12311536_4974302.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:22 Heat of formation + Delta-G solvation = -102.354061 kcal Electronic energy + Delta-G solvation = -31098.060037 eV Core-core repulsion = 26636.192954 eV Total energy + Delta-G solvation = -4461.867082 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.161 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -41.97793 -41.58792 -40.61769 -39.80479 -38.59728 -37.86431 -36.86574 -35.66019 -34.65533 -32.89084 -31.13195 -29.72989 -28.46512 -28.08212 -26.95600 -26.79089 -26.48700 -23.83617 -22.42131 -22.21190 -20.67193 -20.22669 -19.47528 -18.79766 -18.53995 -18.24975 -18.13236 -17.95137 -17.53372 -17.48660 -16.83564 -16.69908 -16.51901 -16.01048 -15.87867 -15.54591 -15.43351 -15.28026 -15.09680 -14.69201 -14.39564 -14.26647 -14.04056 -13.82506 -13.78472 -13.63871 -13.55525 -13.38267 -13.16801 -13.01838 -12.61655 -12.53366 -12.49259 -12.19200 -11.80827 -11.79172 -11.68850 -11.45935 -10.96690 -10.77245 -10.74822 -10.13736 -10.05966 -9.79916 -8.76537 -4.86905 0.07254 0.40282 1.35667 1.40402 1.43940 1.55966 1.75365 2.07466 2.24333 2.36444 2.53469 2.56684 3.15585 3.28209 3.34891 3.50718 3.57769 3.64753 3.68782 3.72256 3.82386 3.89875 3.92076 4.02838 4.06196 4.09273 4.17452 4.22437 4.26256 4.34075 4.39101 4.42618 4.47714 4.52311 4.54591 4.60941 4.64862 4.68692 4.87002 5.05292 5.06746 5.14310 5.20638 5.36036 5.44000 5.70945 6.09722 6.23264 6.25333 6.41677 6.83981 7.02430 7.19862 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.317 6.317 3 C 0.099 3.901 4 C -0.116 4.116 5 C -0.062 4.062 6 C -0.061 4.061 7 O -0.540 6.540 8 Si 0.682 3.318 9 C 0.120 3.880 10 O -0.277 6.277 11 C 0.040 3.960 12 C 0.520 3.480 13 O -0.508 6.508 14 N -0.603 5.603 15 C 0.066 3.934 16 C 0.124 3.876 17 H 0.129 0.871 18 C -0.128 4.128 19 C -0.138 4.138 20 H 0.121 0.879 21 C 0.528 3.472 22 N -0.854 5.854 23 O -0.541 6.541 24 C -0.136 4.136 25 C -0.169 4.169 26 C -0.160 4.160 27 H 0.056 0.944 28 H 0.056 0.944 29 H 0.103 0.897 30 H 0.138 0.862 31 H 0.078 0.922 32 H 0.381 0.619 33 H -0.249 1.249 34 H -0.254 1.254 35 H 0.093 0.907 36 H 0.093 0.907 37 H 0.065 0.935 38 H 0.072 0.928 39 H 0.082 0.918 40 H 0.101 0.899 41 H 0.082 0.918 42 H 0.402 0.598 43 H 0.403 0.597 44 H 0.086 0.914 45 H 0.094 0.906 46 H 0.135 0.865 47 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.428 3.241 2.318 4.233 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.231 6.231 3 C 0.054 3.946 4 C -0.134 4.134 5 C -0.063 4.063 6 C -0.172 4.172 7 O -0.346 6.346 8 Si 0.583 3.417 9 C 0.074 3.926 10 O -0.189 6.189 11 C -0.038 4.038 12 C 0.307 3.693 13 O -0.382 6.382 14 N -0.338 5.338 15 C -0.076 4.076 16 C 0.021 3.979 17 H 0.146 0.854 18 C -0.167 4.167 19 C -0.160 4.160 20 H 0.139 0.861 21 C 0.313 3.687 22 N -0.417 5.417 23 O -0.417 6.417 24 C -0.174 4.174 25 C -0.188 4.188 26 C -0.179 4.179 27 H 0.075 0.925 28 H 0.075 0.925 29 H 0.121 0.879 30 H 0.155 0.845 31 H 0.096 0.904 32 H 0.228 0.772 33 H -0.174 1.174 34 H -0.178 1.178 35 H 0.110 0.890 36 H 0.110 0.890 37 H 0.083 0.917 38 H 0.091 0.909 39 H 0.101 0.899 40 H 0.119 0.881 41 H 0.100 0.900 42 H 0.233 0.767 43 H 0.231 0.769 44 H 0.105 0.895 45 H 0.112 0.888 46 H 0.153 0.847 47 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -1.769 1.980 1.582 3.090 hybrid contribution -1.167 1.129 0.368 1.665 sum -2.936 3.109 1.950 4.700 Atomic orbital electron populations 1.23102 0.77996 1.04365 1.01392 1.86102 1.21635 1.26281 1.89039 1.18716 0.91706 0.84639 0.99505 1.20084 0.92019 0.96943 1.04356 1.18402 0.94060 0.89798 1.04025 1.24498 0.92374 1.10886 0.89431 1.86494 1.27061 1.92655 1.28369 0.95348 0.90601 0.75719 0.79996 1.18580 0.90467 0.84870 0.98694 1.86214 1.33320 1.10721 1.88674 1.22519 0.93234 0.84391 1.03684 1.20010 0.88637 0.83941 0.76713 1.90764 1.14059 1.86127 1.47256 1.47645 1.07156 1.05017 1.73983 1.21946 0.79112 1.03888 1.02686 1.22656 0.97181 0.81901 0.96161 0.85372 1.23352 1.04399 0.92099 0.96840 1.22560 1.00011 0.93283 1.00129 0.86108 1.20373 0.84893 0.82808 0.80651 1.43903 1.37765 1.24477 1.35564 1.90768 1.38174 1.78469 1.34269 1.23451 1.03006 0.93605 0.97369 1.21050 0.92873 0.98692 1.06211 1.21076 1.00312 0.91418 1.05099 0.92504 0.92519 0.87909 0.84516 0.90389 0.77154 1.17357 1.17821 0.88954 0.88960 0.91655 0.90905 0.89924 0.88063 0.89953 0.76687 0.76870 0.89493 0.88818 0.84735 0.84578 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.32 -1.05 10.50 -19.69 -0.21 -1.25 16 3 C 0.10 0.36 6.69 -39.24 -0.26 0.10 16 4 C -0.12 -0.53 8.59 -39.45 -0.34 -0.87 16 5 C -0.06 -0.28 5.30 -104.49 -0.55 -0.84 16 6 C -0.06 -0.18 2.36 36.01 0.09 -0.09 16 7 O -0.54 -1.74 12.86 -35.23 -0.45 -2.19 16 8 Si 0.68 0.63 30.21 -169.99 -5.13 -4.50 16 9 C 0.12 0.46 6.66 -39.24 -0.26 0.20 16 10 O -0.28 -1.16 9.00 -39.58 -0.36 -1.52 16 11 C 0.04 0.02 3.83 36.01 0.14 0.15 16 12 C 0.52 1.17 7.75 -10.98 -0.09 1.09 16 13 O -0.51 -3.27 15.95 -14.36 -0.23 -3.50 16 14 N -0.60 0.29 3.09 -172.90 -0.53 -0.24 16 15 C 0.07 -0.22 9.17 59.85 0.55 0.33 16 16 C 0.12 -0.11 4.23 -67.03 -0.28 -0.39 16 17 H 0.13 0.04 7.17 -51.93 -0.37 -0.33 16 18 C -0.13 0.10 6.99 -25.92 -0.18 -0.08 16 19 C -0.14 0.31 4.14 -90.96 -0.38 -0.06 16 20 H 0.12 -0.49 8.14 -51.93 -0.42 -0.91 16 21 C 0.53 -0.03 7.63 -10.99 -0.08 -0.11 16 22 N -0.85 2.73 8.87 31.22 0.28 3.01 16 23 O -0.54 -2.45 16.75 5.55 0.09 -2.35 16 24 C -0.14 0.38 7.14 -25.83 -0.18 0.20 16 25 C -0.17 -0.24 9.03 -39.45 -0.36 -0.60 16 26 C -0.16 -0.25 9.03 -39.45 -0.36 -0.61 16 27 H 0.06 -0.11 7.66 -51.92 -0.40 -0.50 16 28 H 0.06 -0.11 7.66 -51.93 -0.40 -0.51 16 29 H 0.10 -0.24 8.14 -51.92 -0.42 -0.67 16 30 H 0.14 0.60 4.90 -52.49 -0.26 0.35 16 31 H 0.08 0.20 7.82 -51.92 -0.41 -0.20 16 32 H 0.38 -0.66 8.74 45.56 0.40 -0.26 16 33 H -0.25 -0.87 6.74 56.52 0.38 -0.49 16 34 H -0.25 -0.84 7.11 56.52 0.40 -0.44 16 35 H 0.09 -0.17 6.93 -51.93 -0.36 -0.53 16 36 H 0.09 -0.19 7.62 -51.93 -0.40 -0.58 16 37 H 0.06 -0.24 8.14 -51.93 -0.42 -0.66 16 38 H 0.07 -0.36 6.62 -51.93 -0.34 -0.71 16 39 H 0.08 -0.30 5.80 -51.93 -0.30 -0.60 16 40 H 0.10 0.04 6.77 -51.93 -0.35 -0.31 16 41 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 42 H 0.40 -1.38 8.93 -40.82 -0.36 -1.74 16 43 H 0.40 -2.41 8.83 -40.82 -0.36 -2.77 16 44 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 45 H 0.09 -0.27 5.96 -51.93 -0.31 -0.57 16 46 H 0.13 -0.24 6.29 -52.49 -0.33 -0.57 16 47 H 0.14 -0.15 6.29 -52.49 -0.33 -0.48 16 LS Contribution 384.14 15.07 5.79 5.79 Total: 0.00 -13.59 384.14 -8.53 -22.12 By element: Atomic # 1 Polarization: -8.52 SS G_CDS: -6.21 Total: -14.73 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: -1.56 Total: -0.61 kcal Atomic # 7 Polarization: 3.02 SS G_CDS: -0.26 Total: 2.76 kcal Atomic # 8 Polarization: -9.66 SS G_CDS: -1.15 Total: -10.81 kcal Atomic # 14 Polarization: 0.63 SS G_CDS: -5.13 Total: -4.50 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -13.59 -8.53 -22.12 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12311536_4974302.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.239 kcal (2) G-P(sol) polarization free energy of solvation -13.588 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.826 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.528 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.116 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.354 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds