Wall clock time and date at job start Tue Mar 9 2021 12:52:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35983 * 116.99549 * 2 1 4 4 C 1.38685 * 119.99781 * 180.02562 * 3 2 1 5 5 C 1.38143 * 120.00107 * 179.74125 * 4 3 2 6 6 C 1.50701 * 120.00140 * 180.24907 * 5 4 3 7 7 O 1.42899 * 109.47236 * 255.25396 * 6 5 4 8 8 Si 1.86296 * 109.47185 * 15.25550 * 6 5 4 9 9 C 1.38679 * 120.00105 * 0.50706 * 5 4 3 10 10 O 1.35977 * 120.00578 * 179.74506 * 9 5 4 11 11 C 1.42892 * 117.00538 * 179.72558 * 10 9 5 12 12 C 1.50702 * 109.47679 * 179.97438 * 11 10 9 13 13 O 1.21285 * 119.99565 * 0.02562 * 12 11 10 14 14 N 1.34776 * 120.00410 * 179.97438 * 12 11 10 15 15 C 1.46499 * 119.99606 * 0.02562 * 14 12 11 16 16 C 1.46497 * 119.99883 * 180.02562 * 14 12 11 17 17 H 1.08995 * 112.85336 * 354.91641 * 16 14 12 18 18 C 1.53784 * 113.61606 * 126.11722 * 16 14 12 19 19 C 1.53783 * 87.08351 * 140.06213 * 18 16 14 20 20 H 1.08993 * 113.61586 * 89.19717 * 19 18 16 21 21 C 1.50698 * 113.61413 * 220.02182 * 19 18 16 22 22 N 1.34772 * 120.00165 * 178.47390 * 21 19 18 23 23 O 1.21286 * 120.00054 * 358.46895 * 21 19 18 24 24 C 1.53782 * 87.17071 * 334.60886 * 19 18 16 25 25 C 1.38725 * 119.99709 * 359.46906 * 9 5 4 26 26 C 1.38107 * 120.00050 * 0.27802 * 25 9 5 27 27 H 1.09007 * 109.47581 * 300.00493 * 1 2 3 28 28 H 1.08994 * 109.47325 * 60.00691 * 1 2 3 29 29 H 1.09008 * 109.47357 * 180.02562 * 1 2 3 30 30 H 1.07999 * 119.99551 * 0.02562 * 4 3 2 31 31 H 1.09007 * 109.47129 * 135.25520 * 6 5 4 32 32 H 0.96703 * 114.00056 * 179.97438 * 7 6 5 33 33 H 1.48497 * 110.00183 * 300.00220 * 8 6 5 34 34 H 1.48511 * 109.99598 * 61.31775 * 8 6 5 35 35 H 1.09001 * 109.47381 * 59.99824 * 11 10 9 36 36 H 1.08998 * 109.47363 * 300.00020 * 11 10 9 37 37 H 1.08997 * 109.47425 * 274.32500 * 15 14 12 38 38 H 1.08996 * 109.47257 * 34.33224 * 15 14 12 39 39 H 1.09003 * 109.46766 * 154.32868 * 15 14 12 40 40 H 1.09002 * 113.61295 * 25.51256 * 18 16 14 41 41 H 1.08998 * 113.69019 * 254.62545 * 18 16 14 42 42 H 0.96994 * 120.00386 * 179.97438 * 22 21 19 43 43 H 0.97000 * 119.99685 * 359.71649 * 22 21 19 44 44 H 1.09005 * 113.61040 * 139.93998 * 24 19 18 45 45 H 1.09004 * 113.61937 * 270.83884 * 24 19 18 46 46 H 1.07998 * 120.00306 * 180.29980 * 25 9 5 47 47 H 1.07996 * 120.00200 * 179.97438 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2117 0.0000 4 6 3.4312 1.2843 -0.0005 5 6 4.0583 2.5152 -0.0059 6 6 5.5632 2.5941 -0.0122 7 8 6.0262 2.9645 1.2880 8 14 6.2703 0.9333 -0.4733 9 6 3.3031 3.6782 -0.0002 10 8 3.9203 4.8899 -0.0003 11 6 3.0804 6.0459 -0.0003 12 6 3.9345 7.2875 0.0003 13 8 5.1436 7.1917 0.0002 14 7 3.3549 8.5043 -0.0002 15 6 1.8945 8.6198 -0.0006 16 6 4.1853 9.7112 -0.0002 17 1 5.2494 9.4928 0.0891 18 6 3.8505 10.6892 -1.1388 19 6 4.0518 11.8224 -0.1188 20 1 5.0792 12.1821 -0.0629 21 6 3.0474 12.9381 -0.2500 22 7 3.0860 13.9831 0.6003 23 8 2.2042 12.8957 -1.1208 24 6 3.6971 10.7994 0.9733 25 6 1.9177 3.6056 -0.0002 26 6 1.2907 2.3751 0.0000 27 1 -0.3634 0.5139 0.8900 28 1 -0.3634 0.5137 -0.8900 29 1 -0.3634 -1.0277 0.0005 30 1 4.0194 0.3785 -0.0014 31 1 5.8850 3.3404 -0.7387 32 1 6.9882 3.0342 1.3579 33 1 5.8390 -0.0929 0.5094 34 1 5.8218 0.5513 -1.8366 35 1 2.4511 6.0379 0.8897 36 1 2.4511 6.0378 -0.8902 37 1 1.5264 8.5710 -1.0254 38 1 1.4651 7.8027 0.5790 39 1 1.6052 9.5720 0.4443 40 1 2.8258 10.6041 -1.5003 41 1 4.5848 10.6913 -1.9444 42 1 2.4397 14.7014 0.5156 43 1 3.7578 14.0150 1.2992 44 1 4.3086 10.8896 1.8711 45 1 2.6303 10.7445 1.1903 46 1 1.3294 4.5113 -0.0006 47 1 0.2123 2.3185 0.0004 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12311536_4974302.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:21 Heat of formation + Delta-G solvation = -109.798344 kcal Electronic energy + Delta-G solvation = -31098.382845 eV Core-core repulsion = 26636.192954 eV Total energy + Delta-G solvation = -4462.189891 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.161 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -42.01548 -41.64620 -40.69509 -39.90926 -38.64742 -38.02960 -37.02751 -35.66536 -34.58077 -33.03364 -31.22167 -29.75926 -28.31668 -28.07044 -26.83856 -26.71135 -26.63757 -23.94921 -22.45789 -22.31076 -20.63510 -20.13481 -19.57515 -18.85306 -18.52755 -18.43838 -18.22147 -17.86507 -17.58983 -17.54137 -16.82048 -16.75279 -16.45759 -16.10393 -15.89297 -15.61663 -15.52491 -15.36310 -15.21719 -14.77907 -14.36866 -14.28415 -14.08612 -13.97913 -13.78344 -13.60487 -13.57041 -13.30384 -13.14705 -13.00205 -12.62550 -12.57889 -12.37761 -12.13340 -12.05175 -11.80538 -11.68655 -11.52575 -11.03531 -10.84821 -10.66430 -10.31145 -10.23807 -9.76972 -8.92700 -4.99463 -0.08953 0.22227 1.25887 1.34868 1.35890 1.58782 1.60081 1.91327 2.19594 2.36798 2.41059 2.66479 3.22273 3.34823 3.41500 3.45518 3.56809 3.69687 3.74780 3.84381 3.86498 3.95322 3.98179 4.03730 4.12388 4.14451 4.27001 4.30216 4.32731 4.33359 4.51466 4.54308 4.55869 4.62267 4.66242 4.67341 4.82371 4.87740 4.91547 4.95254 5.01086 5.06882 5.15990 5.28983 5.45606 5.87862 6.06236 6.20839 6.33055 6.46032 6.87846 6.96086 7.33248 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.341 6.341 3 C 0.086 3.914 4 C -0.142 4.142 5 C -0.090 4.090 6 C -0.074 4.074 7 O -0.560 6.560 8 Si 0.781 3.219 9 C 0.104 3.896 10 O -0.303 6.303 11 C 0.036 3.964 12 C 0.514 3.486 13 O -0.563 6.563 14 N -0.596 5.596 15 C 0.058 3.942 16 C 0.117 3.883 17 H 0.113 0.887 18 C -0.131 4.131 19 C -0.129 4.129 20 H 0.143 0.857 21 C 0.525 3.475 22 N -0.837 5.837 23 O -0.593 6.593 24 C -0.121 4.121 25 C -0.160 4.160 26 C -0.156 4.156 27 H 0.069 0.931 28 H 0.070 0.930 29 H 0.115 0.885 30 H 0.126 0.874 31 H 0.075 0.925 32 H 0.399 0.601 33 H -0.287 1.287 34 H -0.288 1.288 35 H 0.121 0.879 36 H 0.120 0.880 37 H 0.071 0.929 38 H 0.097 0.903 39 H 0.088 0.912 40 H 0.089 0.911 41 H 0.075 0.925 42 H 0.405 0.595 43 H 0.418 0.582 44 H 0.103 0.897 45 H 0.098 0.902 46 H 0.172 0.828 47 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.998 4.380 3.181 6.188 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.255 6.255 3 C 0.041 3.959 4 C -0.160 4.160 5 C -0.091 4.091 6 C -0.183 4.183 7 O -0.369 6.369 8 Si 0.686 3.314 9 C 0.059 3.941 10 O -0.216 6.216 11 C -0.042 4.042 12 C 0.302 3.698 13 O -0.441 6.441 14 N -0.329 5.329 15 C -0.083 4.083 16 C 0.013 3.987 17 H 0.131 0.869 18 C -0.170 4.170 19 C -0.151 4.151 20 H 0.160 0.840 21 C 0.311 3.689 22 N -0.400 5.400 23 O -0.473 6.473 24 C -0.159 4.159 25 C -0.179 4.179 26 C -0.174 4.174 27 H 0.088 0.912 28 H 0.089 0.911 29 H 0.133 0.867 30 H 0.143 0.857 31 H 0.093 0.907 32 H 0.250 0.750 33 H -0.215 1.215 34 H -0.215 1.215 35 H 0.138 0.862 36 H 0.138 0.862 37 H 0.090 0.910 38 H 0.115 0.885 39 H 0.106 0.894 40 H 0.108 0.892 41 H 0.093 0.907 42 H 0.236 0.764 43 H 0.250 0.750 44 H 0.121 0.879 45 H 0.116 0.884 46 H 0.189 0.811 47 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges -3.338 3.192 2.493 5.248 hybrid contribution -0.775 0.839 0.112 1.148 sum -4.114 4.031 2.604 6.321 Atomic orbital electron populations 1.23393 0.75968 1.05738 1.02644 1.86072 1.23866 1.26517 1.89085 1.18924 0.91637 0.85626 0.99704 1.20137 0.92969 0.96689 1.06232 1.18700 0.95045 0.90384 1.04923 1.24740 0.92219 1.12098 0.89222 1.86437 1.29005 1.92783 1.28653 0.94379 0.88744 0.72361 0.75946 1.18766 0.91514 0.84582 0.99262 1.86175 1.35020 1.11559 1.88893 1.22788 0.92852 0.82356 1.06193 1.20444 0.88214 0.85138 0.75969 1.90736 1.16296 1.86941 1.50172 1.47740 1.08430 1.04320 1.72435 1.22207 0.77190 1.05246 1.03696 1.22671 0.96665 0.82221 0.97116 0.86920 1.23308 1.03444 0.93160 0.97058 1.22571 1.00536 0.92351 0.99595 0.83974 1.20695 0.84474 0.83554 0.80189 1.43808 1.37752 1.23496 1.34982 1.90747 1.40323 1.79696 1.36557 1.23384 1.03438 0.91776 0.97295 1.21460 0.92096 1.00104 1.04219 1.21424 1.01705 0.90578 1.03695 0.91220 0.91148 0.86676 0.85704 0.90725 0.75046 1.21453 1.21517 0.86183 0.86233 0.91029 0.88497 0.89371 0.89234 0.90654 0.76373 0.75028 0.87895 0.88411 0.81063 0.81532 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.34 -2.46 10.50 -93.36 -0.98 -3.44 16 3 C 0.09 0.69 6.69 22.49 0.15 0.84 16 4 C -0.14 -1.59 8.59 22.35 0.19 -1.39 16 5 C -0.09 -0.97 5.30 -19.78 -0.10 -1.08 16 6 C -0.07 -0.57 2.36 71.24 0.17 -0.40 16 7 O -0.56 -4.56 12.86 -148.98 -1.92 -6.47 16 8 Si 0.78 2.94 30.21 68.60 2.07 5.01 16 9 C 0.10 0.83 6.66 22.49 0.15 0.98 16 10 O -0.30 -2.70 9.00 -74.26 -0.67 -3.37 16 11 C 0.04 -0.01 3.83 71.24 0.27 0.27 16 12 C 0.51 2.50 7.75 87.66 0.68 3.18 16 13 O -0.56 -8.31 15.95 15.99 0.26 -8.06 16 14 N -0.60 0.72 3.09 -819.32 -2.53 -1.81 16 15 C 0.06 -0.47 9.17 127.77 1.17 0.70 16 16 C 0.12 -0.17 4.23 45.58 0.19 0.03 16 17 H 0.11 0.23 7.17 -2.39 -0.02 0.21 16 18 C -0.13 0.13 6.99 31.12 0.22 0.34 16 19 C -0.13 0.65 4.14 -11.01 -0.05 0.61 16 20 H 0.14 -1.33 8.14 -2.39 -0.02 -1.35 16 21 C 0.53 -0.24 7.63 87.66 0.67 0.43 16 22 N -0.84 6.22 8.87 -173.53 -1.54 4.68 16 23 O -0.59 -5.74 16.75 -3.05 -0.05 -5.80 16 24 C -0.12 0.80 7.14 31.18 0.22 1.03 16 25 C -0.16 -0.22 9.03 22.36 0.20 -0.02 16 26 C -0.16 -0.29 9.03 22.35 0.20 -0.09 16 27 H 0.07 -0.37 7.66 -2.38 -0.02 -0.39 16 28 H 0.07 -0.38 7.66 -2.39 -0.02 -0.40 16 29 H 0.11 -0.64 8.14 -2.38 -0.02 -0.65 16 30 H 0.13 1.50 4.90 -2.91 -0.01 1.49 16 31 H 0.07 0.56 7.82 -2.38 -0.02 0.54 16 32 H 0.40 -0.85 8.74 -74.06 -0.65 -1.50 16 33 H -0.29 -2.79 6.74 99.48 0.67 -2.12 16 34 H -0.29 -2.60 7.11 99.48 0.71 -1.89 16 35 H 0.12 -0.75 6.93 -2.39 -0.02 -0.76 16 36 H 0.12 -0.73 7.62 -2.39 -0.02 -0.75 16 37 H 0.07 -0.62 8.14 -2.39 -0.02 -0.64 16 38 H 0.10 -1.24 6.62 -2.39 -0.02 -1.25 16 39 H 0.09 -0.77 5.80 -2.39 -0.01 -0.78 16 40 H 0.09 0.16 6.77 -2.39 -0.02 0.14 16 41 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 42 H 0.41 -3.10 8.93 -92.71 -0.83 -3.92 16 43 H 0.42 -5.72 8.83 -92.71 -0.82 -6.53 16 44 H 0.10 -0.96 8.14 -2.38 -0.02 -0.98 16 45 H 0.10 -0.69 5.96 -2.39 -0.01 -0.71 16 46 H 0.17 -1.21 6.29 -2.91 -0.02 -1.23 16 47 H 0.17 -0.83 6.29 -2.91 -0.02 -0.85 16 Total: 0.00 -35.98 384.14 -1.14 -37.12 By element: Atomic # 1 Polarization: -23.13 SS G_CDS: -1.23 Total: -24.37 kcal Atomic # 6 Polarization: 1.04 SS G_CDS: 5.45 Total: 6.50 kcal Atomic # 7 Polarization: 6.94 SS G_CDS: -4.07 Total: 2.87 kcal Atomic # 8 Polarization: -23.77 SS G_CDS: -3.36 Total: -27.13 kcal Atomic # 14 Polarization: 2.94 SS G_CDS: 2.07 Total: 5.01 kcal Total: -35.98 -1.14 -37.12 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12311536_4974302.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.681 kcal (2) G-P(sol) polarization free energy of solvation -35.979 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.660 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.138 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.117 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.798 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds