Wall clock time and date at job start Tue Mar 9 2021 12:52:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35996 * 116.99904 * 2 1 4 4 C 1.39150 * 120.07400 * 180.02562 * 3 2 1 5 5 O 1.36000 * 120.07464 * 0.02562 * 4 3 2 6 6 C 1.42894 * 117.00215 * 179.97438 * 5 4 3 7 7 C 1.50700 * 109.47001 * 180.02562 * 6 5 4 8 8 O 1.21285 * 120.00156 * 0.02562 * 7 6 5 9 9 N 1.34775 * 120.00121 * 180.02562 * 7 6 5 10 10 C 1.46498 * 119.99736 * 359.97438 * 9 7 6 11 11 C 1.46504 * 120.00202 * 180.02562 * 9 7 6 12 12 H 1.09001 * 112.84781 * 5.05766 * 11 9 7 13 13 C 1.53778 * 113.61551 * 136.25912 * 11 9 7 14 14 C 1.53952 * 87.02005 * 139.95080 * 13 11 9 15 15 H 1.09002 * 113.53546 * 89.18359 * 14 13 11 16 16 C 1.50700 * 113.66533 * 220.06571 * 14 13 11 17 17 N 1.34779 * 120.00064 * 277.56013 * 16 14 13 18 18 O 1.21280 * 120.00162 * 97.55717 * 16 14 13 19 19 C 1.53780 * 87.11208 * 334.63661 * 14 13 11 20 20 C 1.38570 * 119.85607 * 180.02562 * 4 3 2 21 21 C 1.38241 * 119.99827 * 359.97438 * 20 4 3 22 22 C 1.38250 * 120.14596 * 359.97438 * 21 20 4 23 23 C 1.50704 * 119.92738 * 179.97438 * 22 21 20 24 24 O 1.42900 * 109.46936 * 119.99826 * 23 22 21 25 25 Si 1.86298 * 109.46698 * 0.02562 * 23 22 21 26 26 C 1.38244 * 120.14969 * 0.27359 * 22 21 20 27 27 H 1.09004 * 109.46664 * 299.99845 * 1 2 3 28 28 H 1.08999 * 109.47345 * 59.99358 * 1 2 3 29 29 H 1.08997 * 109.47385 * 179.97438 * 1 2 3 30 30 H 1.08990 * 109.47752 * 300.00164 * 6 5 4 31 31 H 1.09006 * 109.46991 * 60.00733 * 6 5 4 32 32 H 1.09000 * 109.47405 * 85.70156 * 10 9 7 33 33 H 1.09006 * 109.46880 * 205.69483 * 10 9 7 34 34 H 1.08996 * 109.47470 * 325.69101 * 10 9 7 35 35 H 1.09006 * 113.60722 * 254.52890 * 13 11 9 36 36 H 1.08997 * 113.61768 * 25.42831 * 13 11 9 37 37 H 0.97004 * 119.99787 * 359.97438 * 17 16 14 38 38 H 0.96995 * 120.00463 * 179.97438 * 17 16 14 39 39 H 1.09004 * 113.60982 * 270.81159 * 19 14 13 40 40 H 1.08995 * 113.68948 * 139.92284 * 19 14 13 41 41 H 1.08001 * 119.99934 * 179.97438 * 20 4 3 42 42 H 1.07996 * 119.92172 * 180.02562 * 21 20 4 43 43 H 1.08995 * 109.47253 * 240.00325 * 23 22 21 44 44 H 0.96707 * 114.00042 * 300.00438 * 24 23 22 45 45 H 1.48502 * 109.99725 * 179.97438 * 25 23 22 46 46 H 1.48500 * 110.00104 * 301.31672 * 25 23 22 47 47 H 1.07997 * 120.00370 * 179.74753 * 26 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2864 -0.0005 5 8 4.1796 0.1477 -0.0016 6 6 5.6003 0.3008 -0.0027 7 6 6.2519 -1.0581 -0.0044 8 8 5.5670 -2.0591 -0.0051 9 7 7.5957 -1.1611 -0.0051 10 6 8.4230 0.0479 -0.0047 11 6 8.2291 -2.4821 -0.0073 12 1 7.5099 -3.2963 -0.0968 13 6 9.4130 -2.5960 -0.9821 14 6 10.1276 -3.4155 0.1077 15 1 9.9283 -4.4855 0.0488 16 6 11.5951 -3.0985 0.2384 17 7 12.4855 -3.6733 -0.5943 18 8 11.9749 -2.3260 1.0927 19 6 9.2451 -2.6800 1.1300 20 6 4.0603 2.5234 0.0000 21 6 3.3029 3.6799 0.0005 22 6 1.9224 3.6058 0.0000 23 6 1.1016 4.8697 0.0012 24 8 0.2776 4.9035 -1.1659 25 14 2.2365 6.3470 0.0024 26 6 1.2932 2.3748 0.0046 27 1 -0.3633 0.5138 0.8901 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3634 -1.0276 -0.0005 30 1 5.9059 0.8509 -0.8925 31 1 5.9072 0.8501 0.8874 32 1 8.5651 0.3907 1.0201 33 1 9.3922 -0.1749 -0.4509 34 1 7.9274 0.8275 -0.5833 35 1 9.1847 -3.1687 -1.8811 36 1 9.8946 -1.6422 -1.1975 37 1 12.1817 -4.2915 -1.2774 38 1 13.4299 -3.4690 -0.5105 39 1 9.6809 -1.7492 1.4932 40 1 8.8812 -3.3191 1.9344 41 1 5.1386 2.5841 0.0000 42 1 3.7908 4.6434 0.0005 43 1 0.4725 4.8935 0.8910 44 1 0.7717 4.8849 -1.9969 45 1 1.4392 7.5999 0.0030 46 1 3.1211 6.3069 1.1945 47 1 0.2146 2.3197 0.0083 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12311536_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:31 Heat of formation + Delta-G solvation = -104.489714 kcal Electronic energy + Delta-G solvation = -30840.126061 eV Core-core repulsion = 26378.166369 eV Total energy + Delta-G solvation = -4461.959691 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.161 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -41.97747 -41.61025 -40.55642 -39.36686 -38.88070 -38.36721 -36.91041 -35.64244 -34.64706 -32.03275 -31.45207 -29.88866 -28.49502 -28.37893 -26.98755 -26.81732 -26.13012 -23.68589 -22.69274 -22.21205 -20.66978 -20.20775 -19.82535 -18.74540 -18.43784 -18.18117 -17.93586 -17.76802 -17.61375 -17.17441 -16.77245 -16.67999 -16.45602 -16.09497 -15.89848 -15.79508 -15.65434 -15.39460 -15.21404 -14.80280 -14.44017 -14.28664 -14.22388 -13.85589 -13.70407 -13.59208 -13.52435 -13.32419 -13.13892 -12.64162 -12.50672 -12.46235 -12.18793 -12.16463 -12.05337 -12.00451 -11.78886 -11.72897 -10.96072 -10.76313 -10.73907 -10.47143 -9.78409 -9.77546 -8.83801 -5.06541 0.18638 0.30730 1.26781 1.35622 1.45358 1.56659 1.60564 1.94697 2.31999 2.33952 2.53785 2.58440 3.16809 3.29577 3.35853 3.41574 3.59240 3.63292 3.69249 3.70109 3.80225 3.85504 3.92600 3.95296 4.07067 4.13266 4.25796 4.28146 4.30135 4.35538 4.40189 4.44286 4.49166 4.53719 4.57854 4.62689 4.66022 4.69610 4.88440 5.00712 5.08140 5.11002 5.37395 5.37784 5.56842 5.71830 5.97387 6.18377 6.26142 6.54330 6.55818 7.04352 7.20757 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.104 3.896 5 O -0.278 6.278 6 C 0.040 3.960 7 C 0.519 3.481 8 O -0.509 6.509 9 N -0.604 5.604 10 C 0.066 3.934 11 C 0.124 3.876 12 H 0.128 0.872 13 C -0.135 4.135 14 C -0.138 4.138 15 H 0.120 0.880 16 C 0.529 3.471 17 N -0.854 5.854 18 O -0.540 6.540 19 C -0.128 4.128 20 C -0.169 4.169 21 C -0.114 4.114 22 C -0.115 4.115 23 C -0.066 4.066 24 O -0.541 6.541 25 Si 0.691 3.309 26 C -0.146 4.146 27 H 0.055 0.945 28 H 0.057 0.943 29 H 0.103 0.897 30 H 0.095 0.905 31 H 0.094 0.906 32 H 0.065 0.935 33 H 0.082 0.918 34 H 0.073 0.927 35 H 0.086 0.914 36 H 0.094 0.906 37 H 0.403 0.597 38 H 0.402 0.598 39 H 0.102 0.898 40 H 0.081 0.919 41 H 0.139 0.861 42 H 0.132 0.868 43 H 0.113 0.887 44 H 0.379 0.621 45 H -0.255 1.255 46 H -0.257 1.257 47 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.169 1.067 -4.911 6.530 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.190 6.190 6 C -0.038 4.038 7 C 0.306 3.694 8 O -0.382 6.382 9 N -0.338 5.338 10 C -0.077 4.077 11 C 0.021 3.979 12 H 0.146 0.854 13 C -0.174 4.174 14 C -0.160 4.160 15 H 0.138 0.862 16 C 0.313 3.687 17 N -0.417 5.417 18 O -0.417 6.417 19 C -0.167 4.167 20 C -0.188 4.188 21 C -0.132 4.132 22 C -0.116 4.116 23 C -0.177 4.177 24 O -0.346 6.346 25 Si 0.593 3.407 26 C -0.165 4.165 27 H 0.074 0.926 28 H 0.076 0.924 29 H 0.121 0.879 30 H 0.112 0.888 31 H 0.112 0.888 32 H 0.084 0.916 33 H 0.101 0.899 34 H 0.092 0.908 35 H 0.105 0.895 36 H 0.112 0.888 37 H 0.231 0.769 38 H 0.233 0.767 39 H 0.120 0.880 40 H 0.100 0.900 41 H 0.156 0.844 42 H 0.149 0.851 43 H 0.131 0.869 44 H 0.227 0.773 45 H -0.180 1.180 46 H -0.182 1.182 47 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 3.620 1.398 -3.420 5.173 hybrid contribution 0.070 -0.401 0.028 0.408 sum 3.690 0.996 -3.393 5.111 Atomic orbital electron populations 1.23130 0.78129 1.04390 1.01366 1.86250 1.21321 1.25340 1.88542 1.18282 0.89008 0.85565 1.01040 1.18280 0.88309 0.85772 1.01777 1.86273 1.16120 1.27778 1.88828 1.22540 0.81101 0.96354 1.03832 1.20038 0.82058 0.90581 0.76772 1.90781 1.62167 1.38073 1.47190 1.47658 1.04943 1.07231 1.73999 1.21954 0.96678 0.86292 1.02731 1.22630 0.93337 0.85782 0.96186 0.85409 1.23448 0.95794 1.00774 0.97347 1.22590 0.91145 1.02120 1.00156 0.86172 1.20365 0.88259 0.79668 0.80407 1.43906 1.10999 1.49436 1.37373 1.90765 1.80651 1.35488 1.34756 1.23355 0.94611 1.01926 0.96832 1.20988 1.00438 0.90701 1.06687 1.20683 0.92778 0.97845 1.01850 1.20038 0.93685 0.95204 1.02691 1.25034 0.99547 1.01849 0.91248 1.86498 1.35753 1.96937 1.15415 0.94694 0.80870 0.76539 0.88618 1.20932 1.00403 0.90395 1.04761 0.92629 0.92425 0.87879 0.88764 0.88794 0.91643 0.89922 0.90810 0.89517 0.88758 0.76875 0.76690 0.88000 0.89982 0.84350 0.85064 0.86928 0.77318 1.18012 1.18226 0.84168 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.35 10.28 -34.23 -0.35 -1.70 16 3 C 0.11 0.37 6.70 -39.12 -0.26 0.11 16 4 C 0.10 0.30 6.70 -39.12 -0.26 0.03 16 5 O -0.28 -1.16 9.45 -47.36 -0.45 -1.61 16 6 C 0.04 0.00 3.83 36.01 0.14 0.14 16 7 C 0.52 1.20 7.75 -10.99 -0.09 1.11 16 8 O -0.51 -3.56 15.95 -14.36 -0.23 -3.79 16 9 N -0.60 0.33 3.09 -173.00 -0.53 -0.20 16 10 C 0.07 -0.24 9.17 59.85 0.55 0.31 16 11 C 0.12 -0.10 4.23 -67.12 -0.28 -0.38 16 12 H 0.13 0.07 7.17 -51.93 -0.37 -0.30 16 13 C -0.14 0.39 7.14 -25.83 -0.18 0.20 16 14 C -0.14 0.31 4.15 -90.87 -0.38 -0.07 16 15 H 0.12 -0.48 8.14 -51.93 -0.42 -0.91 16 16 C 0.53 -0.04 7.63 -10.98 -0.08 -0.13 16 17 N -0.85 2.76 8.87 31.22 0.28 3.04 16 18 O -0.54 -2.41 16.74 5.56 0.09 -2.32 16 19 C -0.13 0.09 7.00 -25.92 -0.18 -0.09 16 20 C -0.17 0.03 9.04 -39.46 -0.36 -0.33 16 21 C -0.11 0.06 8.66 -39.58 -0.34 -0.28 16 22 C -0.12 -0.05 5.39 -104.61 -0.56 -0.61 16 23 C -0.07 0.02 2.82 36.01 0.10 0.12 16 24 O -0.54 -0.03 12.77 -35.23 -0.45 -0.48 16 25 Si 0.69 -0.96 29.78 -169.99 -5.06 -6.02 16 26 C -0.15 -0.24 8.60 -39.46 -0.34 -0.58 16 27 H 0.06 -0.03 7.65 -51.93 -0.40 -0.43 16 28 H 0.06 -0.04 7.67 -51.93 -0.40 -0.44 16 29 H 0.10 -0.09 8.14 -51.93 -0.42 -0.52 16 30 H 0.09 -0.28 6.93 -51.93 -0.36 -0.64 16 31 H 0.09 -0.23 7.63 -51.93 -0.40 -0.62 16 32 H 0.06 -0.25 8.14 -51.93 -0.42 -0.68 16 33 H 0.08 -0.32 5.79 -51.93 -0.30 -0.62 16 34 H 0.07 -0.41 6.62 -51.93 -0.34 -0.75 16 35 H 0.09 -0.33 8.14 -51.93 -0.42 -0.75 16 36 H 0.09 -0.28 5.94 -51.93 -0.31 -0.59 16 37 H 0.40 -2.42 8.83 -40.82 -0.36 -2.78 16 38 H 0.40 -1.40 8.93 -40.82 -0.36 -1.76 16 39 H 0.10 0.05 6.75 -51.93 -0.35 -0.30 16 40 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.14 -0.45 6.30 -52.49 -0.33 -0.78 16 42 H 0.13 -0.36 4.87 -52.49 -0.26 -0.62 16 43 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 44 H 0.38 -1.42 8.70 45.56 0.40 -1.03 16 45 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 46 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 47 H 0.14 0.09 6.30 -52.49 -0.33 -0.24 16 LS Contribution 384.52 15.07 5.79 5.79 Total: 0.00 -13.60 384.52 -8.65 -22.25 By element: Atomic # 1 Polarization: -9.32 SS G_CDS: -6.20 Total: -15.52 kcal Atomic # 6 Polarization: 2.11 SS G_CDS: -1.54 Total: 0.57 kcal Atomic # 7 Polarization: 3.09 SS G_CDS: -0.26 Total: 2.83 kcal Atomic # 8 Polarization: -8.51 SS G_CDS: -1.39 Total: -9.90 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.06 Total: -6.02 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -13.60 -8.65 -22.25 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12311536_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.243 kcal (2) G-P(sol) polarization free energy of solvation -13.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.839 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.650 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.246 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.490 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds