Wall clock time and date at job start Tue Mar 9 2021 12:52:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.34773 * 120.00180 * 2 1 4 4 O 1.21286 * 119.99861 * 179.97438 * 3 2 1 5 5 C 1.50694 * 120.00002 * 359.97438 * 3 2 1 6 6 N 1.46500 * 109.47035 * 179.97438 * 5 3 2 7 7 C 1.36837 * 125.06232 * 265.02438 * 6 5 3 8 8 C 1.34236 * 109.93632 * 179.97438 * 7 6 5 9 9 C 1.50696 * 126.49925 * 179.97438 * 8 7 6 10 10 O 1.42901 * 109.47398 * 105.02932 * 9 8 7 11 11 Si 1.86303 * 109.47349 * 345.02634 * 9 8 7 12 12 C 1.46487 * 107.00134 * 0.02562 * 8 7 6 13 13 C 1.39593 * 134.03997 * 179.97438 * 12 8 7 14 14 C 1.36666 * 119.76486 * 180.02562 * 13 12 8 15 15 C 1.38788 * 120.52758 * 0.02562 * 14 13 12 16 16 C 1.37787 * 120.66670 * 0.02562 * 15 14 13 17 17 C 1.37692 * 125.06641 * 84.99983 * 6 5 3 18 18 C 1.46506 * 119.99568 * 180.02562 * 2 1 3 19 19 H 1.08993 * 112.84753 * 168.80822 * 18 2 1 20 20 C 1.53780 * 113.61265 * 299.99965 * 18 2 1 21 21 C 1.53780 * 87.08073 * 139.98353 * 20 18 2 22 22 H 1.09003 * 113.61133 * 89.20068 * 21 20 18 23 23 C 1.50702 * 113.61201 * 220.01576 * 21 20 18 24 24 N 1.34780 * 119.99575 * 179.97438 * 23 21 20 25 25 O 1.21276 * 120.00117 * 359.97438 * 23 21 20 26 26 C 1.53772 * 113.61729 * 37.49615 * 18 2 1 27 27 H 1.08996 * 109.46885 * 89.99874 * 1 2 3 28 28 H 1.09002 * 109.47148 * 209.99998 * 1 2 3 29 29 H 1.09001 * 109.46909 * 330.00028 * 1 2 3 30 30 H 1.09002 * 109.47069 * 60.00029 * 5 3 2 31 31 H 1.08998 * 109.47186 * 299.99891 * 5 3 2 32 32 H 1.07995 * 125.03264 * 359.96047 * 7 6 5 33 33 H 1.09004 * 109.47636 * 225.02864 * 9 8 7 34 34 H 0.96704 * 114.00455 * 180.02562 * 10 9 8 35 35 H 1.48500 * 109.99766 * 298.68136 * 11 9 8 36 36 H 1.48503 * 109.99810 * 59.99806 * 11 9 8 37 37 H 1.08004 * 120.11888 * 0.04978 * 13 12 8 38 38 H 1.08004 * 119.73539 * 180.02562 * 14 13 12 39 39 H 1.08004 * 119.66483 * 180.02562 * 15 14 13 40 40 H 1.08001 * 120.10902 * 180.27772 * 16 15 14 41 41 H 1.09009 * 113.61419 * 254.53267 * 20 18 2 42 42 H 1.09002 * 113.61761 * 25.43083 * 20 18 2 43 43 H 0.96997 * 120.00294 * 359.97438 * 24 23 21 44 44 H 0.96996 * 119.99977 * 180.02562 * 24 23 21 45 45 H 1.09005 * 113.61637 * 334.56557 * 26 18 2 46 46 H 1.09003 * 113.61804 * 105.46984 * 26 18 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1671 0.0000 4 8 3.3518 1.1671 0.0005 5 6 1.3855 2.4722 -0.0006 6 7 2.3376 3.5857 0.0002 7 6 2.7737 4.2463 1.1163 8 6 3.6396 5.2111 0.7681 9 6 4.3447 6.1620 1.7006 10 8 5.7119 5.7692 1.8372 11 14 3.5177 6.1229 3.3695 12 6 3.7683 5.1652 -0.6904 13 6 4.5031 5.8988 -1.6234 14 6 4.4008 5.6010 -2.9532 15 6 3.5715 4.5750 -3.3842 16 6 2.8366 3.8389 -2.4806 17 6 2.9272 4.1231 -1.1221 18 6 2.1975 -1.2688 -0.0006 19 1 3.2624 -1.1427 -0.1955 20 6 1.8953 -2.1551 1.2193 21 6 1.9128 -3.3527 0.2549 22 1 2.8997 -3.7983 0.1300 23 6 0.8416 -4.3735 0.5406 24 7 0.7395 -5.4762 -0.2277 25 8 0.0715 -4.2028 1.4617 26 6 1.5374 -2.3608 -0.8587 27 1 -0.3633 0.0000 -1.0276 28 1 -0.3633 -0.8900 0.5138 29 1 -0.3633 0.8900 0.5138 30 1 0.7585 2.5302 0.8892 31 1 0.7592 2.5298 -0.8908 32 1 2.4666 4.0245 2.1276 33 1 4.2959 7.1724 1.2946 34 1 6.2278 6.3380 2.4251 35 1 2.1038 6.5600 3.2460 36 1 3.5776 4.7506 3.9340 37 1 5.1504 6.6987 -1.2953 38 1 4.9699 6.1687 -3.6746 39 1 3.5016 4.3512 -4.4385 40 1 2.1975 3.0394 -2.8254 41 1 2.6997 -2.1748 1.9547 42 1 0.9182 -1.9670 1.6644 43 1 1.3553 -5.6125 -0.9647 44 1 0.0499 -6.1331 -0.0441 45 1 0.4623 -2.2291 -0.9818 46 1 2.0527 -2.5468 -1.8010 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12311536_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:58 Heat of formation + Delta-G solvation = -1.165167 kcal Electronic energy + Delta-G solvation = -30082.590901 eV Core-core repulsion = 25940.597890 eV Total energy + Delta-G solvation = -4141.993011 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.157 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -42.68954 -41.80769 -40.55970 -38.74926 -38.08604 -37.59573 -35.77473 -34.65481 -34.19211 -31.56043 -30.37888 -29.36737 -28.35455 -27.09547 -26.81568 -25.64189 -23.89536 -23.04632 -22.18868 -20.79996 -20.56548 -20.20161 -18.98506 -18.35672 -18.23188 -18.15141 -17.86730 -17.78961 -16.89217 -16.77156 -16.51703 -16.46573 -15.74533 -15.55570 -15.31810 -15.11645 -14.98953 -14.82743 -14.66567 -14.38647 -14.28717 -14.18122 -13.70324 -13.64573 -13.42833 -13.36409 -13.11027 -12.77449 -12.65130 -12.53604 -12.45975 -12.24143 -12.05982 -11.81117 -11.75037 -11.25022 -10.97812 -10.72155 -10.63319 -10.18144 -9.84459 -9.26437 -8.74352 -4.97320 0.03671 0.56632 1.20995 1.25420 1.32863 1.50776 1.55257 1.68850 1.89034 1.97886 2.58540 2.86769 3.16214 3.30350 3.37840 3.44553 3.51576 3.62027 3.65592 3.76020 3.77524 3.90267 3.98050 4.08700 4.17913 4.19878 4.22068 4.33248 4.44163 4.49246 4.51781 4.55116 4.59242 4.61203 4.70325 4.73332 4.81383 4.83599 4.86572 5.06907 5.08028 5.36922 5.44225 5.58364 5.65184 5.65987 5.82664 5.99760 6.12276 6.19870 6.40333 6.86302 6.99247 7.27567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.059 3.941 2 N -0.596 5.596 3 C 0.491 3.509 4 O -0.570 6.570 5 C 0.089 3.911 6 N -0.469 5.469 7 C 0.050 3.950 8 C -0.178 4.178 9 C -0.050 4.050 10 O -0.570 6.570 11 Si 0.787 3.213 12 C -0.119 4.119 13 C -0.081 4.081 14 C -0.151 4.151 15 C -0.100 4.100 16 C -0.136 4.136 17 C 0.090 3.910 18 C 0.116 3.884 19 H 0.106 0.894 20 C -0.133 4.133 21 C -0.129 4.129 22 H 0.141 0.859 23 C 0.526 3.474 24 N -0.837 5.837 25 O -0.593 6.593 26 C -0.114 4.114 27 H 0.084 0.916 28 H 0.079 0.921 29 H 0.094 0.906 30 H 0.150 0.850 31 H 0.148 0.852 32 H 0.172 0.828 33 H 0.081 0.919 34 H 0.399 0.601 35 H -0.282 1.282 36 H -0.297 1.297 37 H 0.129 0.871 38 H 0.145 0.855 39 H 0.151 0.849 40 H 0.133 0.867 41 H 0.070 0.930 42 H 0.090 0.910 43 H 0.419 0.581 44 H 0.406 0.594 45 H 0.099 0.901 46 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.416 -0.764 -2.987 4.602 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.328 5.328 3 C 0.278 3.722 4 O -0.449 6.449 5 C -0.036 4.036 6 N -0.151 5.151 7 C -0.075 4.075 8 C -0.185 4.185 9 C -0.159 4.159 10 O -0.380 6.380 11 Si 0.692 3.308 12 C -0.123 4.123 13 C -0.100 4.100 14 C -0.169 4.169 15 C -0.119 4.119 16 C -0.157 4.157 17 C -0.015 4.015 18 C 0.012 3.988 19 H 0.124 0.876 20 C -0.172 4.172 21 C -0.151 4.151 22 H 0.158 0.842 23 C 0.312 3.688 24 N -0.400 5.400 25 O -0.473 6.473 26 C -0.152 4.152 27 H 0.102 0.898 28 H 0.098 0.902 29 H 0.113 0.887 30 H 0.167 0.833 31 H 0.166 0.834 32 H 0.189 0.811 33 H 0.099 0.901 34 H 0.249 0.751 35 H -0.209 1.209 36 H -0.224 1.224 37 H 0.147 0.853 38 H 0.163 0.837 39 H 0.169 0.831 40 H 0.151 0.849 41 H 0.088 0.912 42 H 0.108 0.892 43 H 0.250 0.750 44 H 0.237 0.763 45 H 0.117 0.883 46 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges -4.242 -1.555 -2.297 5.069 hybrid contribution 0.097 -0.880 -0.523 1.029 sum -4.146 -2.436 -2.820 5.574 Atomic orbital electron populations 1.22195 0.76887 1.05015 1.04096 1.47882 1.08292 1.04651 1.71984 1.21395 0.88047 0.86688 0.76054 1.90787 1.15846 1.87586 1.50638 1.22013 0.90504 0.81627 1.09427 1.43406 1.39009 1.28319 1.04400 1.21691 0.99816 0.94613 0.91415 1.20044 1.03725 1.02318 0.92463 1.24305 0.86917 0.97182 1.07496 1.86513 1.21063 1.58349 1.72035 0.94197 0.78654 0.81327 0.76672 1.19351 1.00844 0.99003 0.93149 1.20508 0.97827 0.99040 0.92595 1.20992 1.00990 0.99500 0.95463 1.21201 0.95525 0.95008 1.00208 1.20261 1.03951 1.02692 0.88776 1.18502 0.97619 0.96254 0.89122 1.22586 0.97610 0.81408 0.97150 0.87618 1.23320 1.03241 0.93666 0.96975 1.22573 0.99685 0.93415 0.99439 0.84152 1.20651 0.84553 0.82791 0.80832 1.43799 1.38081 1.23143 1.34939 1.90743 1.45832 1.78126 1.32618 1.23283 1.02632 0.91784 0.97547 0.89798 0.90190 0.88726 0.83250 0.83444 0.81122 0.90066 0.75095 1.20876 1.22429 0.85323 0.83723 0.83089 0.84929 0.91164 0.89194 0.75013 0.76295 0.88297 0.87862 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.48 8.84 127.77 1.13 0.65 16 2 N -0.60 0.51 3.08 -819.65 -2.53 -2.01 16 3 C 0.49 2.47 7.74 87.66 0.68 3.15 16 4 O -0.57 -9.25 15.90 -3.05 -0.05 -9.30 16 5 C 0.09 -0.04 5.03 85.63 0.43 0.39 16 6 N -0.47 -3.89 2.27 -520.01 -1.18 -5.07 16 7 C 0.05 0.50 9.89 83.00 0.82 1.32 16 8 C -0.18 -2.09 5.61 -18.63 -0.10 -2.19 16 9 C -0.05 -0.26 3.05 71.23 0.22 -0.04 16 10 O -0.57 -3.67 12.86 -148.98 -1.92 -5.59 16 11 Si 0.79 0.31 30.79 68.60 2.11 2.42 16 12 C -0.12 -1.60 6.35 -20.20 -0.13 -1.73 16 13 C -0.08 -0.83 10.05 22.23 0.22 -0.60 16 14 C -0.15 -0.98 9.97 22.03 0.22 -0.76 16 15 C -0.10 -0.54 10.01 22.29 0.22 -0.32 16 16 C -0.14 -1.00 10.00 22.37 0.22 -0.78 16 17 C 0.09 1.02 6.80 39.03 0.27 1.29 16 18 C 0.12 -0.03 4.21 45.51 0.19 0.16 16 19 H 0.11 0.43 7.23 -2.39 -0.02 0.41 16 20 C -0.13 -0.08 6.94 31.12 0.22 0.13 16 21 C -0.13 0.51 4.15 -11.02 -0.05 0.47 16 22 H 0.14 -1.13 8.14 -2.39 -0.02 -1.15 16 23 C 0.53 0.18 7.63 87.66 0.67 0.85 16 24 N -0.84 5.70 8.87 -173.53 -1.54 4.16 16 25 O -0.59 -6.20 16.74 -3.02 -0.05 -6.25 16 26 C -0.11 0.69 7.05 31.12 0.22 0.91 16 27 H 0.08 -0.95 8.14 -2.39 -0.02 -0.97 16 28 H 0.08 -0.53 6.34 -2.39 -0.02 -0.54 16 29 H 0.09 -1.13 6.44 -2.39 -0.02 -1.15 16 30 H 0.15 -1.04 7.37 -2.39 -0.02 -1.06 16 31 H 0.15 -0.99 8.11 -2.39 -0.02 -1.01 16 32 H 0.17 1.08 6.30 -2.91 -0.02 1.06 16 33 H 0.08 0.14 7.96 -2.38 -0.02 0.12 16 34 H 0.40 -2.10 8.74 -74.05 -0.65 -2.75 16 35 H -0.28 -1.27 7.11 99.48 0.71 -0.56 16 36 H -0.30 -2.15 7.04 99.48 0.70 -1.45 16 37 H 0.13 0.94 8.06 -2.91 -0.02 0.92 16 38 H 0.14 0.18 8.06 -2.91 -0.02 0.16 16 39 H 0.15 -0.10 8.06 -2.91 -0.02 -0.12 16 40 H 0.13 0.33 8.06 -2.91 -0.02 0.30 16 41 H 0.07 0.17 8.14 -2.38 -0.02 0.15 16 42 H 0.09 0.29 6.21 -2.39 -0.01 0.27 16 43 H 0.42 -5.47 8.83 -92.71 -0.82 -6.29 16 44 H 0.41 -2.90 8.93 -92.71 -0.83 -3.73 16 45 H 0.10 -0.66 6.67 -2.38 -0.02 -0.67 16 46 H 0.10 -0.92 8.14 -2.39 -0.02 -0.94 16 Total: 0.00 -36.83 381.93 -0.91 -37.74 By element: Atomic # 1 Polarization: -17.79 SS G_CDS: -1.21 Total: -19.00 kcal Atomic # 6 Polarization: -2.56 SS G_CDS: 5.45 Total: 2.89 kcal Atomic # 7 Polarization: 2.32 SS G_CDS: -5.25 Total: -2.92 kcal Atomic # 8 Polarization: -19.12 SS G_CDS: -2.01 Total: -21.13 kcal Atomic # 14 Polarization: 0.31 SS G_CDS: 2.11 Total: 2.42 kcal Total: -36.83 -0.91 -37.74 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12311536_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.571 kcal (2) G-P(sol) polarization free energy of solvation -36.828 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -0.256 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.909 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.737 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.165 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds