Wall clock time and date at job start Tue Mar 9 2021 12:55:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.46498 * 120.00057 * 2 1 4 4 C 1.52997 * 109.47113 * 89.99751 * 3 2 1 5 5 H 1.09005 * 112.85079 * 316.19469 * 4 3 2 6 6 C 1.54052 * 113.61963 * 87.50548 * 4 3 2 7 7 C 1.53781 * 86.98687 * 139.97823 * 6 4 3 8 8 H 1.09002 * 113.61445 * 89.16393 * 7 6 4 9 9 O 1.42905 * 113.61505 * 219.98264 * 7 6 4 10 10 C 1.53783 * 113.61545 * 185.00271 * 4 3 2 11 11 C 1.34773 * 119.99817 * 179.97438 * 2 1 3 12 12 O 1.21286 * 119.99936 * 179.97438 * 11 2 1 13 13 C 1.50702 * 120.00096 * 0.02562 * 11 2 1 14 14 C 1.53003 * 109.47012 * 179.97438 * 13 11 2 15 15 O 1.42903 * 109.46869 * 179.97438 * 14 13 11 16 16 C 1.35898 * 116.99623 * 180.02562 * 15 14 13 17 17 C 1.38712 * 120.05447 * 180.02562 * 16 15 14 18 18 C 1.38161 * 119.94352 * 179.97438 * 17 16 15 19 19 C 1.50706 * 119.97222 * 180.02562 * 18 17 16 20 20 O 1.42905 * 109.47039 * 300.00592 * 19 18 17 21 21 Si 1.86300 * 109.47256 * 180.02562 * 19 18 17 22 22 C 1.38244 * 120.05934 * 0.02562 * 18 17 16 23 23 C 1.38288 * 120.10592 * 0.02562 * 22 18 17 24 24 C 1.38116 * 120.05976 * 359.68577 * 23 22 18 25 25 H 1.08999 * 109.47185 * 89.99544 * 1 2 3 26 26 H 1.08998 * 109.47138 * 210.00113 * 1 2 3 27 27 H 1.09003 * 109.47007 * 330.00198 * 1 2 3 28 28 H 1.09006 * 109.46866 * 330.00117 * 3 2 1 29 29 H 1.08999 * 109.47097 * 209.99982 * 3 2 1 30 30 H 1.08999 * 113.60931 * 25.47201 * 6 4 3 31 31 H 1.08998 * 113.69722 * 254.49284 * 6 4 3 32 32 H 0.96699 * 113.99826 * 279.13770 * 9 7 6 33 33 H 1.08992 * 113.61796 * 105.46955 * 10 4 3 34 34 H 1.09000 * 113.61157 * 334.56375 * 10 4 3 35 35 H 1.09005 * 109.46814 * 299.99919 * 13 11 2 36 36 H 1.09003 * 109.47313 * 59.99989 * 13 11 2 37 37 H 1.08996 * 109.46757 * 299.99882 * 14 13 11 38 38 H 1.09003 * 109.47071 * 59.99865 * 14 13 11 39 39 H 1.08007 * 120.02458 * 359.97438 * 17 16 15 40 40 H 1.09005 * 109.46684 * 59.99888 * 19 18 17 41 41 H 0.96702 * 113.99644 * 299.99461 * 20 19 18 42 42 H 1.48493 * 109.99770 * 58.68345 * 21 19 18 43 43 H 1.48500 * 109.99943 * 180.02562 * 21 19 18 44 44 H 1.08000 * 119.94591 * 179.97438 * 22 18 17 45 45 H 1.08005 * 119.96702 * 179.97438 * 23 22 18 46 46 H 1.07999 * 120.03100 * 180.31787 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4525 1.7104 1.4425 5 1 1.5791 1.5884 2.0832 6 6 3.7476 1.1333 2.0449 7 6 3.9635 2.5109 2.6935 8 1 3.5041 2.6072 3.6773 9 8 5.3242 2.9471 2.6713 10 6 3.1105 3.0958 1.5554 11 6 2.1389 -1.1672 0.0005 12 8 3.3517 -1.1672 0.0001 13 6 1.3853 -2.4723 0.0005 14 6 2.3796 -3.6352 0.0005 15 8 1.6650 -4.8728 0.0011 16 6 2.4052 -6.0125 0.0017 17 6 1.7767 -7.2491 0.0018 18 6 2.5314 -8.4063 0.0019 19 6 1.8492 -9.7501 0.0014 20 8 1.0323 -9.8700 1.1678 21 14 3.1343 -11.0990 0.0025 22 6 3.9119 -8.3327 0.0025 23 6 4.5409 -7.1011 0.0035 24 6 3.7909 -5.9413 -0.0026 25 1 -0.3633 0.0001 -1.0277 26 1 -0.3633 -0.8900 0.5138 27 1 -0.3633 0.8900 0.5138 28 1 1.6084 2.0284 -0.5138 29 1 3.1499 1.1384 -0.5138 30 1 4.5006 0.8791 1.2990 31 1 3.5771 0.3335 2.7655 32 1 5.8713 2.5644 3.3708 33 1 2.4260 3.8790 1.8809 34 1 3.6897 3.3770 0.6759 35 1 0.7583 -2.5298 0.8903 36 1 0.7590 -2.5303 -0.8897 37 1 3.0062 -3.5775 -0.8895 38 1 3.0063 -3.5775 0.8905 39 1 0.6982 -7.3071 0.0018 40 1 1.2269 -9.8412 -0.8889 41 1 1.5210 -9.7985 1.9992 42 1 4.0087 -10.9663 1.1953 43 1 2.4743 -12.4292 0.0013 44 1 4.5001 -9.2384 0.0030 45 1 5.6195 -7.0462 0.0043 46 1 4.2826 -4.9797 -0.0070 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12312124_4549614.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:31 Heat of formation + Delta-G solvation = -95.910720 kcal Electronic energy + Delta-G solvation = -26718.768463 eV Core-core repulsion = 22769.515028 eV Total energy + Delta-G solvation = -3949.253435 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -41.49833 -41.08093 -39.98071 -39.09617 -37.34221 -36.89360 -35.69405 -33.40095 -32.43661 -30.95249 -29.58386 -27.69782 -26.95050 -26.65597 -25.29094 -23.64441 -23.35921 -21.93472 -20.57350 -20.27827 -19.28384 -18.51626 -18.12064 -17.81508 -17.57665 -17.14509 -17.04201 -16.79708 -16.57684 -16.23216 -16.06497 -15.49818 -15.22015 -14.96575 -14.78333 -14.51350 -14.43205 -14.27503 -14.05050 -13.81508 -13.68815 -13.39237 -13.22836 -13.08890 -12.91038 -12.85271 -12.67036 -12.45173 -12.35062 -11.91602 -11.81953 -11.80363 -11.53885 -11.28614 -10.92127 -10.77301 -10.63801 -9.88595 -9.76770 -9.21028 -4.93441 0.24964 0.44670 1.28457 1.50691 1.61322 1.62875 1.97319 2.30498 2.70995 3.22928 3.36185 3.39724 3.51509 3.61176 3.63470 3.73600 3.78428 3.79830 3.89649 3.92583 3.97325 4.08184 4.18053 4.23300 4.26424 4.30021 4.35603 4.36811 4.45983 4.54407 4.57262 4.59651 4.61625 4.72578 4.75857 4.79395 4.83953 5.00339 5.01102 5.14230 5.30359 5.32208 5.41575 5.45731 5.47785 5.71891 6.18930 6.40006 6.41210 6.71840 7.03314 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.072 3.928 2 N -0.615 5.615 3 C 0.127 3.873 4 C -0.128 4.128 5 H 0.093 0.907 6 C -0.154 4.154 7 C 0.072 3.928 8 H 0.079 0.921 9 O -0.561 6.561 10 C -0.120 4.120 11 C 0.520 3.480 12 O -0.533 6.533 13 C -0.140 4.140 14 C 0.075 3.925 15 O -0.317 6.317 16 C 0.132 3.868 17 C -0.126 4.126 18 C -0.081 4.081 19 C -0.076 4.076 20 O -0.529 6.529 21 Si 0.689 3.311 22 C -0.155 4.155 23 C -0.073 4.073 24 C -0.202 4.202 25 H 0.061 0.939 26 H 0.075 0.925 27 H 0.075 0.925 28 H 0.081 0.919 29 H 0.089 0.911 30 H 0.096 0.904 31 H 0.063 0.937 32 H 0.379 0.621 33 H 0.075 0.925 34 H 0.093 0.907 35 H 0.106 0.894 36 H 0.106 0.894 37 H 0.073 0.927 38 H 0.072 0.928 39 H 0.134 0.866 40 H 0.120 0.880 41 H 0.376 0.624 42 H -0.260 1.260 43 H -0.257 1.257 44 H 0.129 0.871 45 H 0.131 0.869 46 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.768 1.715 -0.391 2.494 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 N -0.348 5.348 3 C 0.004 3.996 4 C -0.147 4.147 5 H 0.111 0.889 6 C -0.192 4.192 7 C 0.013 3.987 8 H 0.097 0.903 9 O -0.366 6.366 10 C -0.158 4.158 11 C 0.308 3.692 12 O -0.409 6.409 13 C -0.180 4.180 14 C -0.001 4.001 15 O -0.231 6.231 16 C 0.087 3.913 17 C -0.145 4.145 18 C -0.081 4.081 19 C -0.186 4.186 20 O -0.335 6.335 21 Si 0.590 3.410 22 C -0.172 4.172 23 C -0.091 4.091 24 C -0.221 4.221 25 H 0.080 0.920 26 H 0.094 0.906 27 H 0.094 0.906 28 H 0.100 0.900 29 H 0.107 0.893 30 H 0.115 0.885 31 H 0.082 0.918 32 H 0.226 0.774 33 H 0.094 0.906 34 H 0.111 0.889 35 H 0.124 0.876 36 H 0.124 0.876 37 H 0.091 0.909 38 H 0.090 0.910 39 H 0.152 0.848 40 H 0.138 0.862 41 H 0.224 0.776 42 H -0.185 1.185 43 H -0.182 1.182 44 H 0.146 0.854 45 H 0.148 0.852 46 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -1.699 1.332 -0.941 2.355 hybrid contribution -0.200 0.290 1.652 1.690 sum -1.900 1.623 0.711 2.597 Atomic orbital electron populations 1.21911 0.78960 1.03742 1.02441 1.47817 1.07234 1.05973 1.73795 1.21511 0.98087 0.84045 0.95929 1.22784 0.97935 0.96771 0.97231 0.88913 1.23734 0.97687 0.96904 1.00832 1.23367 0.82827 0.94660 0.97802 0.90306 1.86523 1.20900 1.72167 1.57028 1.23041 0.97612 0.96108 0.99074 1.20273 0.87863 0.85069 0.75999 1.90738 1.13700 1.87318 1.49149 1.21510 0.99468 0.90954 1.06072 1.22424 0.93884 0.80597 1.03152 1.85975 1.35766 1.12641 1.88671 1.18958 0.89937 0.86176 0.96204 1.20240 1.00738 0.88659 1.04844 1.20070 0.93494 0.95133 0.99426 1.25083 1.02590 0.99533 0.91352 1.86604 1.36618 1.94577 1.15699 0.94874 0.79447 0.76988 0.89699 1.20925 0.93669 0.97961 1.04682 1.20929 1.00109 0.91417 0.96670 1.21396 0.92778 1.00143 1.07740 0.91994 0.90636 0.90582 0.90019 0.89314 0.88524 0.91849 0.77371 0.90612 0.88870 0.87625 0.87554 0.90887 0.91024 0.84833 0.86205 0.77606 1.18483 1.18236 0.85393 0.85157 0.84989 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.30 10.24 59.85 0.61 0.32 16 2 N -0.61 0.72 2.87 -181.57 -0.52 0.20 16 3 C 0.13 -0.12 5.24 -4.04 -0.02 -0.14 16 4 C -0.13 0.12 3.97 -89.66 -0.36 -0.24 16 5 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 6 C -0.15 -0.11 6.91 -25.78 -0.18 -0.29 16 7 C 0.07 0.02 5.20 -25.92 -0.13 -0.11 16 8 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 9 O -0.56 -0.99 13.67 -35.23 -0.48 -1.47 16 10 C -0.12 0.05 7.47 -25.92 -0.19 -0.14 16 11 C 0.52 0.34 7.67 -10.99 -0.08 0.26 16 12 O -0.53 -2.13 14.85 5.55 0.08 -2.04 16 13 C -0.14 0.18 4.62 -27.88 -0.13 0.05 16 14 C 0.07 0.04 4.03 37.16 0.15 0.19 16 15 O -0.32 -0.65 10.14 -19.42 -0.20 -0.85 16 16 C 0.13 0.31 6.69 -39.22 -0.26 0.05 16 17 C -0.13 -0.27 9.55 -39.43 -0.38 -0.64 16 18 C -0.08 -0.08 5.39 -104.65 -0.56 -0.64 16 19 C -0.08 -0.02 2.82 36.01 0.10 0.08 16 20 O -0.53 -0.89 12.77 -35.23 -0.45 -1.34 16 21 Si 0.69 -0.46 29.79 -169.99 -5.06 -5.52 16 22 C -0.15 -0.05 8.67 -39.56 -0.34 -0.39 16 23 C -0.07 -0.03 10.04 -39.61 -0.40 -0.43 16 24 C -0.20 -0.28 9.04 -39.44 -0.36 -0.64 16 25 H 0.06 -0.28 8.14 -51.93 -0.42 -0.71 16 26 H 0.07 -0.38 6.44 -51.93 -0.33 -0.71 16 27 H 0.08 -0.37 8.07 -51.93 -0.42 -0.79 16 28 H 0.08 -0.21 8.07 -51.93 -0.42 -0.63 16 29 H 0.09 0.09 7.13 -51.93 -0.37 -0.28 16 30 H 0.10 0.28 7.76 -51.93 -0.40 -0.13 16 31 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 32 H 0.38 -0.79 9.12 45.56 0.42 -0.38 16 33 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 34 H 0.09 0.03 8.10 -51.93 -0.42 -0.39 16 35 H 0.11 -0.28 7.40 -51.93 -0.38 -0.66 16 36 H 0.11 -0.27 8.11 -51.93 -0.42 -0.69 16 37 H 0.07 0.06 7.61 -51.93 -0.40 -0.33 16 38 H 0.07 0.06 7.63 -51.93 -0.40 -0.33 16 39 H 0.13 0.27 8.06 -52.48 -0.42 -0.15 16 40 H 0.12 -0.06 7.96 -51.93 -0.41 -0.47 16 41 H 0.38 -0.41 8.70 45.56 0.40 -0.02 16 42 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 43 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 44 H 0.13 -0.20 4.87 -52.49 -0.26 -0.45 16 45 H 0.13 -0.21 8.06 -52.48 -0.42 -0.63 16 46 H 0.13 0.07 6.30 -52.49 -0.33 -0.26 16 LS Contribution 375.95 15.07 5.67 5.67 Total: 0.00 -8.43 375.95 -9.81 -18.24 By element: Atomic # 1 Polarization: -3.85 SS G_CDS: -6.31 Total: -10.16 kcal Atomic # 6 Polarization: -0.19 SS G_CDS: -2.53 Total: -2.72 kcal Atomic # 7 Polarization: 0.72 SS G_CDS: -0.52 Total: 0.20 kcal Atomic # 8 Polarization: -4.65 SS G_CDS: -1.05 Total: -5.70 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: -5.06 Total: -5.52 kcal Total LS contribution 5.67 Total: 5.67 kcal Total: -8.43 -9.81 -18.24 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_4549614.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.674 kcal (2) G-P(sol) polarization free energy of solvation -8.431 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.105 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.806 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.237 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.911 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds