Wall clock time and date at job start Tue Mar 9 2021 12:55:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.46498 * 120.00057 * 2 1 4 4 C 1.52997 * 109.47113 * 89.99751 * 3 2 1 5 5 H 1.09005 * 112.85079 * 316.19469 * 4 3 2 6 6 C 1.54052 * 113.61963 * 87.50548 * 4 3 2 7 7 C 1.53781 * 86.98687 * 139.97823 * 6 4 3 8 8 H 1.09002 * 113.61445 * 89.16393 * 7 6 4 9 9 O 1.42905 * 113.61505 * 219.98264 * 7 6 4 10 10 C 1.53783 * 113.61545 * 185.00271 * 4 3 2 11 11 C 1.34773 * 119.99817 * 179.97438 * 2 1 3 12 12 O 1.21286 * 119.99936 * 179.97438 * 11 2 1 13 13 C 1.50702 * 120.00096 * 0.02562 * 11 2 1 14 14 C 1.53003 * 109.47012 * 179.97438 * 13 11 2 15 15 O 1.42903 * 109.46869 * 179.97438 * 14 13 11 16 16 C 1.35898 * 116.99623 * 180.02562 * 15 14 13 17 17 C 1.38712 * 120.05447 * 180.02562 * 16 15 14 18 18 C 1.38161 * 119.94352 * 179.97438 * 17 16 15 19 19 C 1.50706 * 119.97222 * 180.02562 * 18 17 16 20 20 O 1.42905 * 109.47039 * 300.00592 * 19 18 17 21 21 Si 1.86300 * 109.47256 * 180.02562 * 19 18 17 22 22 C 1.38244 * 120.05934 * 0.02562 * 18 17 16 23 23 C 1.38288 * 120.10592 * 0.02562 * 22 18 17 24 24 C 1.38116 * 120.05976 * 359.68577 * 23 22 18 25 25 H 1.08999 * 109.47185 * 89.99544 * 1 2 3 26 26 H 1.08998 * 109.47138 * 210.00113 * 1 2 3 27 27 H 1.09003 * 109.47007 * 330.00198 * 1 2 3 28 28 H 1.09006 * 109.46866 * 330.00117 * 3 2 1 29 29 H 1.08999 * 109.47097 * 209.99982 * 3 2 1 30 30 H 1.08999 * 113.60931 * 25.47201 * 6 4 3 31 31 H 1.08998 * 113.69722 * 254.49284 * 6 4 3 32 32 H 0.96699 * 113.99826 * 279.13770 * 9 7 6 33 33 H 1.08992 * 113.61796 * 105.46955 * 10 4 3 34 34 H 1.09000 * 113.61157 * 334.56375 * 10 4 3 35 35 H 1.09005 * 109.46814 * 299.99919 * 13 11 2 36 36 H 1.09003 * 109.47313 * 59.99989 * 13 11 2 37 37 H 1.08996 * 109.46757 * 299.99882 * 14 13 11 38 38 H 1.09003 * 109.47071 * 59.99865 * 14 13 11 39 39 H 1.08007 * 120.02458 * 359.97438 * 17 16 15 40 40 H 1.09005 * 109.46684 * 59.99888 * 19 18 17 41 41 H 0.96702 * 113.99644 * 299.99461 * 20 19 18 42 42 H 1.48493 * 109.99770 * 58.68345 * 21 19 18 43 43 H 1.48500 * 109.99943 * 180.02562 * 21 19 18 44 44 H 1.08000 * 119.94591 * 179.97438 * 22 18 17 45 45 H 1.08005 * 119.96702 * 179.97438 * 23 22 18 46 46 H 1.07999 * 120.03100 * 180.31787 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4525 1.7104 1.4425 5 1 1.5791 1.5884 2.0832 6 6 3.7476 1.1333 2.0449 7 6 3.9635 2.5109 2.6935 8 1 3.5041 2.6072 3.6773 9 8 5.3242 2.9471 2.6713 10 6 3.1105 3.0958 1.5554 11 6 2.1389 -1.1672 0.0005 12 8 3.3517 -1.1672 0.0001 13 6 1.3853 -2.4723 0.0005 14 6 2.3796 -3.6352 0.0005 15 8 1.6650 -4.8728 0.0011 16 6 2.4052 -6.0125 0.0017 17 6 1.7767 -7.2491 0.0018 18 6 2.5314 -8.4063 0.0019 19 6 1.8492 -9.7501 0.0014 20 8 1.0323 -9.8700 1.1678 21 14 3.1343 -11.0990 0.0025 22 6 3.9119 -8.3327 0.0025 23 6 4.5409 -7.1011 0.0035 24 6 3.7909 -5.9413 -0.0026 25 1 -0.3633 0.0001 -1.0277 26 1 -0.3633 -0.8900 0.5138 27 1 -0.3633 0.8900 0.5138 28 1 1.6084 2.0284 -0.5138 29 1 3.1499 1.1384 -0.5138 30 1 4.5006 0.8791 1.2990 31 1 3.5771 0.3335 2.7655 32 1 5.8713 2.5644 3.3708 33 1 2.4260 3.8790 1.8809 34 1 3.6897 3.3770 0.6759 35 1 0.7583 -2.5298 0.8903 36 1 0.7590 -2.5303 -0.8897 37 1 3.0062 -3.5775 -0.8895 38 1 3.0063 -3.5775 0.8905 39 1 0.6982 -7.3071 0.0018 40 1 1.2269 -9.8412 -0.8889 41 1 1.5210 -9.7985 1.9992 42 1 4.0087 -10.9663 1.1953 43 1 2.4743 -12.4292 0.0013 44 1 4.5001 -9.2384 0.0030 45 1 5.6195 -7.0462 0.0043 46 1 4.2826 -4.9797 -0.0070 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12312124_4549614.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:30 Heat of formation + Delta-G solvation = -96.249959 kcal Electronic energy + Delta-G solvation = -26718.783173 eV Core-core repulsion = 22769.515028 eV Total energy + Delta-G solvation = -3949.268145 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.166 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -41.52795 -41.11575 -40.00486 -39.16385 -37.41111 -36.90696 -35.71842 -33.40074 -32.49939 -31.00167 -29.50026 -27.55494 -26.98198 -26.67046 -25.29413 -23.70104 -23.35228 -21.98258 -20.57262 -20.24045 -19.33435 -18.55616 -18.13630 -17.86104 -17.59000 -17.16263 -17.01840 -16.85395 -16.58818 -16.25825 -16.08026 -15.55864 -15.26613 -14.96872 -14.78383 -14.45983 -14.44077 -14.22741 -14.13873 -13.78105 -13.50226 -13.40372 -13.25126 -13.06844 -12.90996 -12.88846 -12.63559 -12.42030 -12.37597 -12.00301 -11.84518 -11.81801 -11.59269 -11.27851 -10.97545 -10.80478 -10.68809 -9.95761 -9.69487 -9.29790 -4.90444 0.17581 0.37088 1.29183 1.50037 1.61951 1.64833 1.95850 2.32815 2.63891 3.26575 3.38966 3.42972 3.53775 3.61661 3.62316 3.76237 3.81175 3.83632 3.88054 3.94870 4.06902 4.20946 4.23231 4.27451 4.29330 4.36920 4.39447 4.50814 4.54218 4.58812 4.60729 4.70158 4.72585 4.74641 4.80198 4.85586 4.95929 4.96154 4.97597 5.15351 5.23851 5.35926 5.37082 5.41743 5.51303 5.68072 6.26471 6.31701 6.46266 6.81330 7.05047 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.066 3.934 2 N -0.611 5.611 3 C 0.125 3.875 4 C -0.115 4.115 5 H 0.108 0.892 6 C -0.155 4.155 7 C 0.069 3.931 8 H 0.096 0.904 9 O -0.583 6.583 10 C -0.120 4.120 11 C 0.514 3.486 12 O -0.575 6.575 13 C -0.131 4.131 14 C 0.077 3.923 15 O -0.324 6.324 16 C 0.116 3.884 17 C -0.141 4.141 18 C -0.081 4.081 19 C -0.086 4.086 20 O -0.548 6.548 21 Si 0.775 3.225 22 C -0.156 4.156 23 C -0.076 4.076 24 C -0.211 4.211 25 H 0.071 0.929 26 H 0.088 0.912 27 H 0.090 0.910 28 H 0.103 0.897 29 H 0.062 0.938 30 H 0.068 0.932 31 H 0.057 0.943 32 H 0.392 0.608 33 H 0.091 0.909 34 H 0.081 0.919 35 H 0.123 0.877 36 H 0.123 0.877 37 H 0.064 0.936 38 H 0.063 0.937 39 H 0.128 0.872 40 H 0.126 0.874 41 H 0.386 0.614 42 H -0.281 1.281 43 H -0.302 1.302 44 H 0.149 0.851 45 H 0.152 0.848 46 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.612 1.947 -0.257 3.268 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.343 5.343 3 C 0.003 3.997 4 C -0.134 4.134 5 H 0.126 0.874 6 C -0.193 4.193 7 C 0.010 3.990 8 H 0.114 0.886 9 O -0.391 6.391 10 C -0.158 4.158 11 C 0.303 3.697 12 O -0.455 6.455 13 C -0.171 4.171 14 C 0.001 3.999 15 O -0.239 6.239 16 C 0.071 3.929 17 C -0.160 4.160 18 C -0.082 4.082 19 C -0.195 4.195 20 O -0.356 6.356 21 Si 0.680 3.320 22 C -0.174 4.174 23 C -0.093 4.093 24 C -0.230 4.230 25 H 0.089 0.911 26 H 0.106 0.894 27 H 0.108 0.892 28 H 0.121 0.879 29 H 0.081 0.919 30 H 0.087 0.913 31 H 0.076 0.924 32 H 0.242 0.758 33 H 0.109 0.891 34 H 0.099 0.901 35 H 0.141 0.859 36 H 0.141 0.859 37 H 0.083 0.917 38 H 0.081 0.919 39 H 0.146 0.854 40 H 0.144 0.856 41 H 0.235 0.765 42 H -0.208 1.208 43 H -0.230 1.230 44 H 0.166 0.834 45 H 0.170 0.830 46 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -2.571 1.599 -0.806 3.133 hybrid contribution 0.052 0.202 1.631 1.644 sum -2.519 1.801 0.825 3.205 Atomic orbital electron populations 1.22155 0.76799 1.05124 1.03503 1.47919 1.08548 1.05261 1.72599 1.21499 0.97509 0.84762 0.95957 1.22738 0.97460 0.95973 0.97242 0.87405 1.23629 0.98236 0.97191 1.00253 1.23544 0.82495 0.94110 0.98820 0.88648 1.86481 1.21892 1.72642 1.58122 1.23034 0.97644 0.96717 0.98374 1.20626 0.87482 0.86116 0.75476 1.90724 1.15558 1.87942 1.51299 1.21473 0.98931 0.89041 1.07638 1.22412 0.94325 0.80767 1.02352 1.85951 1.36176 1.12958 1.88779 1.19147 0.90470 0.86348 0.96901 1.20324 1.00693 0.89149 1.05804 1.20175 0.93889 0.95009 0.99115 1.25352 1.03149 0.99720 0.91248 1.86572 1.37762 1.94650 1.16620 0.93890 0.77177 0.73184 0.87728 1.21174 0.93507 0.98760 1.03927 1.21243 1.01276 0.91070 0.95756 1.21540 0.92624 1.00834 1.07979 0.91065 0.89379 0.89163 0.87863 0.91907 0.91325 0.92430 0.75807 0.89057 0.90071 0.85893 0.85935 0.91721 0.91887 0.85376 0.85628 0.76455 1.20780 1.23038 0.83411 0.82995 0.84739 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.64 10.24 127.77 1.31 0.66 16 2 N -0.61 1.56 2.87 -846.75 -2.43 -0.88 16 3 C 0.13 -0.19 5.24 86.38 0.45 0.26 16 4 C -0.11 0.21 3.97 -10.17 -0.04 0.17 16 5 H 0.11 -0.49 8.14 -2.38 -0.02 -0.51 16 6 C -0.16 -0.45 6.91 31.21 0.22 -0.24 16 7 C 0.07 0.07 5.20 31.12 0.16 0.24 16 8 H 0.10 -0.23 8.14 -2.39 -0.02 -0.25 16 9 O -0.58 -2.60 13.67 -148.98 -2.04 -4.64 16 10 C -0.12 0.10 7.47 31.12 0.23 0.34 16 11 C 0.51 1.08 7.67 87.66 0.67 1.75 16 12 O -0.58 -5.86 14.85 -3.05 -0.05 -5.90 16 13 C -0.13 0.33 4.62 29.85 0.14 0.47 16 14 C 0.08 0.17 4.03 71.98 0.29 0.47 16 15 O -0.32 -1.67 10.14 -92.40 -0.94 -2.61 16 16 C 0.12 0.67 6.69 22.51 0.15 0.82 16 17 C -0.14 -0.73 9.55 22.36 0.21 -0.51 16 18 C -0.08 -0.17 5.39 -19.88 -0.11 -0.28 16 19 C -0.09 -0.05 2.82 71.24 0.20 0.15 16 20 O -0.55 -2.04 12.77 -148.98 -1.90 -3.94 16 21 Si 0.78 -1.34 29.79 68.60 2.04 0.71 16 22 C -0.16 0.00 8.67 22.28 0.19 0.19 16 23 C -0.08 -0.05 10.04 22.25 0.22 0.18 16 24 C -0.21 -0.76 9.04 22.36 0.20 -0.55 16 25 H 0.07 -0.78 8.14 -2.39 -0.02 -0.80 16 26 H 0.09 -1.05 6.44 -2.39 -0.02 -1.07 16 27 H 0.09 -1.09 8.07 -2.39 -0.02 -1.11 16 28 H 0.10 -0.61 8.07 -2.38 -0.02 -0.63 16 29 H 0.06 0.26 7.13 -2.39 -0.02 0.24 16 30 H 0.07 0.60 7.76 -2.39 -0.02 0.58 16 31 H 0.06 0.21 8.14 -2.39 -0.02 0.19 16 32 H 0.39 -1.26 9.12 -74.06 -0.68 -1.94 16 33 H 0.09 -0.36 8.14 -2.39 -0.02 -0.38 16 34 H 0.08 0.13 8.10 -2.39 -0.02 0.11 16 35 H 0.12 -0.74 7.40 -2.38 -0.02 -0.76 16 36 H 0.12 -0.70 8.11 -2.39 -0.02 -0.72 16 37 H 0.06 0.23 7.61 -2.39 -0.02 0.22 16 38 H 0.06 0.23 7.63 -2.39 -0.02 0.21 16 39 H 0.13 0.70 8.06 -2.91 -0.02 0.67 16 40 H 0.13 -0.12 7.96 -2.38 -0.02 -0.14 16 41 H 0.39 -0.72 8.70 -74.06 -0.64 -1.36 16 42 H -0.28 -0.52 7.11 99.48 0.71 0.18 16 43 H -0.30 -1.77 7.11 99.48 0.71 -1.06 16 44 H 0.15 -0.67 4.87 -2.91 -0.01 -0.69 16 45 H 0.15 -0.65 8.06 -2.91 -0.02 -0.67 16 46 H 0.13 0.32 6.30 -2.91 -0.02 0.31 16 Total: 0.00 -21.42 375.95 -1.08 -22.51 By element: Atomic # 1 Polarization: -9.08 SS G_CDS: -0.28 Total: -9.36 kcal Atomic # 6 Polarization: -0.39 SS G_CDS: 4.51 Total: 4.12 kcal Atomic # 7 Polarization: 1.56 SS G_CDS: -2.43 Total: -0.88 kcal Atomic # 8 Polarization: -12.17 SS G_CDS: -4.92 Total: -17.09 kcal Atomic # 14 Polarization: -1.34 SS G_CDS: 2.04 Total: 0.71 kcal Total: -21.42 -1.08 -22.51 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_4549614.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.744 kcal (2) G-P(sol) polarization free energy of solvation -21.422 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.166 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.084 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.506 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.250 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds