Wall clock time and date at job start Tue Mar 9 2021 12:55:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.36000 * 117.00034 * 2 1 4 4 C 1.39156 * 120.07062 * 180.02562 * 3 2 1 5 5 O 1.35988 * 120.07247 * 359.95430 * 4 3 2 6 6 C 1.42905 * 116.99988 * 180.02562 * 5 4 3 7 7 C 1.50697 * 109.47007 * 179.97438 * 6 5 4 8 8 O 1.21283 * 120.00521 * 359.72812 * 7 6 5 9 9 N 1.34784 * 119.99774 * 179.97438 * 7 6 5 10 10 C 1.46499 * 119.99971 * 359.72768 * 9 7 6 11 11 C 1.46499 * 119.99893 * 179.72962 * 9 7 6 12 12 C 1.52996 * 109.47198 * 90.00083 * 11 9 7 13 13 H 1.08998 * 112.85301 * 43.80372 * 12 11 9 14 14 C 1.53781 * 113.61191 * 174.99549 * 12 11 9 15 15 C 1.53785 * 87.07896 * 139.97981 * 14 12 11 16 16 H 1.09005 * 113.61054 * 89.20163 * 15 14 12 17 17 O 1.42897 * 113.61770 * 220.01971 * 15 14 12 18 18 C 1.53774 * 113.61348 * 272.49471 * 12 11 9 19 19 C 1.38561 * 119.85256 * 180.23713 * 4 3 2 20 20 C 1.38252 * 119.99612 * 359.46219 * 19 4 3 21 21 N 1.48002 * 119.92140 * 180.27773 * 20 19 4 22 22 O 1.21796 * 120.00408 * 0.28044 * 21 20 19 23 23 O 1.21803 * 119.99486 * 180.27688 * 21 20 19 24 24 C 1.38250 * 120.14673 * 0.56127 * 20 19 4 25 25 C 1.50697 * 119.92761 * 179.72072 * 24 20 19 26 26 O 1.42909 * 109.46899 * 74.97224 * 25 24 20 27 27 Si 1.86297 * 109.47533 * 194.97710 * 25 24 20 28 28 C 1.38244 * 120.14474 * 359.69458 * 24 20 19 29 29 H 1.08993 * 109.47319 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.46609 * 299.99824 * 1 2 3 31 31 H 1.09000 * 109.46849 * 59.99342 * 1 2 3 32 32 H 1.09001 * 109.46781 * 60.00457 * 6 5 4 33 33 H 1.08993 * 109.47173 * 300.00248 * 6 5 4 34 34 H 1.08999 * 109.47256 * 89.99766 * 10 9 7 35 35 H 1.08998 * 109.47416 * 209.99869 * 10 9 7 36 36 H 1.09008 * 109.47058 * 330.00468 * 10 9 7 37 37 H 1.08997 * 109.46865 * 210.00034 * 11 9 7 38 38 H 1.08998 * 109.47058 * 329.99547 * 11 9 7 39 39 H 1.09002 * 113.62023 * 254.52662 * 14 12 11 40 40 H 1.09002 * 113.61582 * 25.35084 * 14 12 11 41 41 H 0.96700 * 114.00280 * 180.02562 * 17 15 14 42 42 H 1.09001 * 113.61951 * 334.56948 * 18 12 11 43 43 H 1.09002 * 113.61781 * 105.47532 * 18 12 11 44 44 H 1.08000 * 120.00328 * 179.72424 * 19 4 3 45 45 H 1.09000 * 109.47239 * 314.98161 * 25 24 20 46 46 H 0.96699 * 113.99624 * 60.00482 * 26 25 24 47 47 H 1.48498 * 110.00019 * 58.67665 * 27 25 24 48 48 H 1.48491 * 110.00098 * 180.02562 * 27 25 24 49 49 H 1.08002 * 119.99406 * 180.02562 * 28 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2118 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1795 0.1477 -0.0001 6 6 5.6004 0.3006 -0.0002 7 6 6.2518 -1.0583 0.0010 8 8 5.5669 -2.0592 0.0067 9 7 7.5957 -1.1614 0.0006 10 6 8.4231 0.0476 -0.0069 11 6 8.2291 -2.4824 0.0077 12 6 8.4485 -2.9504 -1.4323 13 1 8.8406 -2.1645 -2.0778 14 6 9.2202 -4.2764 -1.5381 15 6 8.2550 -4.6566 -2.6733 16 1 8.5939 -4.3388 -3.6594 17 8 7.8451 -6.0252 -2.6419 18 6 7.2426 -3.6954 -2.0284 19 6 4.0604 2.5233 0.0044 20 6 3.3030 3.6798 -0.0013 21 7 3.9717 5.0002 -0.0022 22 8 5.1878 5.0670 -0.0030 23 8 3.3057 6.0200 -0.0022 24 6 1.9225 3.6057 -0.0003 25 6 1.1017 4.8696 -0.0003 26 8 1.1344 5.4588 -1.3018 27 14 -0.6592 4.4666 0.4550 28 6 1.2933 2.3748 0.0001 29 1 -0.3633 -1.0276 0.0005 30 1 -0.3632 0.5138 0.8900 31 1 -0.3633 0.5139 -0.8899 32 1 5.9066 0.8506 0.8897 33 1 5.9066 0.8500 -0.8902 34 1 8.6289 0.3534 1.0189 35 1 9.3624 -0.1580 -0.5202 36 1 7.8933 0.8472 -0.5249 37 1 9.1890 -2.4223 0.5205 38 1 7.5840 -3.1917 0.5261 39 1 10.2530 -4.1558 -1.8651 40 1 9.1271 -4.9076 -0.6543 41 1 7.2382 -6.2705 -3.3537 42 1 6.6076 -4.1683 -1.2793 43 1 6.6788 -3.1057 -2.7513 44 1 5.1387 2.5839 0.0085 45 1 1.5136 5.5702 0.7261 46 1 0.7822 4.8899 -2.0000 47 1 -0.7036 3.8241 1.7931 48 1 -1.4791 5.7046 0.4580 49 1 0.2147 2.3197 0.0004 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12312124_4549636.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:49 Heat of formation + Delta-G solvation = -106.953920 kcal Electronic energy + Delta-G solvation = -36497.593011 eV Core-core repulsion = 31398.162079 eV Total energy + Delta-G solvation = -5099.430931 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 383.160 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -43.25277 -42.14888 -41.36455 -40.26675 -39.54654 -39.20342 -37.58833 -37.10495 -36.87872 -35.73024 -32.73297 -32.62831 -30.94309 -29.21108 -28.82009 -27.88091 -27.42608 -26.64488 -25.78921 -24.12386 -23.47373 -23.11574 -20.75948 -20.68158 -20.56751 -19.66352 -19.54082 -18.78677 -18.49412 -18.47153 -18.22999 -17.89481 -17.71375 -17.45707 -17.16405 -16.95213 -16.51993 -16.42903 -16.14236 -15.95405 -15.70545 -15.23197 -15.04121 -14.82130 -14.67496 -14.41496 -14.34974 -13.99541 -13.89982 -13.75992 -13.49035 -13.39085 -13.18923 -13.10862 -12.78111 -12.72908 -12.58413 -12.50768 -12.45621 -12.29368 -12.21388 -11.95763 -11.82935 -11.68470 -11.30177 -10.93678 -10.76881 -10.59673 -10.54314 -9.84443 -9.54695 -5.28497 -1.24014 -0.52495 0.30616 0.41804 1.01837 1.10810 1.37377 1.43321 1.70079 1.81652 1.85191 2.07563 2.88916 2.99906 3.15286 3.22330 3.24814 3.34156 3.44153 3.50025 3.58713 3.60572 3.65340 3.76964 3.78168 3.83650 3.87502 3.93127 3.93219 3.96297 4.13336 4.15023 4.22427 4.24061 4.33636 4.37174 4.41732 4.47569 4.52972 4.65483 4.74507 4.77838 4.83376 5.00687 5.11736 5.24200 5.40810 5.45868 5.47136 5.90513 6.08071 6.42778 6.72474 6.76985 6.94355 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.284 6.284 3 C 0.170 3.830 4 C 0.110 3.890 5 O -0.265 6.265 6 C 0.033 3.967 7 C 0.518 3.482 8 O -0.502 6.502 9 N -0.613 5.613 10 C 0.069 3.931 11 C 0.129 3.871 12 C -0.129 4.129 13 H 0.094 0.906 14 C -0.120 4.120 15 C 0.073 3.927 16 H 0.080 0.920 17 O -0.560 6.560 18 C -0.154 4.154 19 C -0.119 4.119 20 C -0.025 4.025 21 N 0.032 4.968 22 O -0.174 6.174 23 O -0.129 6.129 24 C -0.043 4.043 25 C -0.074 4.074 26 O -0.515 6.515 27 Si 0.675 3.325 28 C -0.177 4.177 29 H 0.114 0.886 30 H 0.064 0.936 31 H 0.068 0.932 32 H 0.098 0.902 33 H 0.098 0.902 34 H 0.065 0.935 35 H 0.081 0.919 36 H 0.072 0.928 37 H 0.085 0.915 38 H 0.090 0.910 39 H 0.075 0.925 40 H 0.093 0.907 41 H 0.379 0.621 42 H 0.097 0.903 43 H 0.063 0.937 44 H 0.165 0.835 45 H 0.139 0.861 46 H 0.374 0.626 47 H -0.252 1.252 48 H -0.242 1.242 49 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.958 -2.173 -2.146 3.201 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.195 6.195 3 C 0.122 3.878 4 C 0.062 3.938 5 O -0.177 6.177 6 C -0.046 4.046 7 C 0.304 3.696 8 O -0.376 6.376 9 N -0.348 5.348 10 C -0.074 4.074 11 C 0.007 3.993 12 C -0.148 4.148 13 H 0.112 0.888 14 C -0.158 4.158 15 C 0.014 3.986 16 H 0.097 0.903 17 O -0.366 6.366 18 C -0.192 4.192 19 C -0.138 4.138 20 C -0.109 4.109 21 N 0.551 4.449 22 O -0.384 6.384 23 O -0.350 6.350 24 C -0.045 4.045 25 C -0.184 4.184 26 O -0.319 6.319 27 Si 0.574 3.426 28 C -0.195 4.195 29 H 0.132 0.868 30 H 0.083 0.917 31 H 0.086 0.914 32 H 0.116 0.884 33 H 0.116 0.884 34 H 0.083 0.917 35 H 0.100 0.900 36 H 0.091 0.909 37 H 0.103 0.897 38 H 0.108 0.892 39 H 0.094 0.906 40 H 0.112 0.888 41 H 0.226 0.774 42 H 0.115 0.885 43 H 0.082 0.918 44 H 0.183 0.817 45 H 0.156 0.844 46 H 0.220 0.780 47 H -0.176 1.176 48 H -0.166 1.166 49 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -1.611 -3.162 -0.698 3.616 hybrid contribution 0.578 1.007 -0.355 1.214 sum -1.032 -2.155 -1.053 2.611 Atomic orbital electron populations 1.23419 0.76800 1.05781 1.02172 1.86349 1.22488 1.24214 1.86498 1.18448 0.89036 0.85902 0.94415 1.17858 0.88440 0.85354 1.02111 1.86334 1.16958 1.26022 1.88349 1.22729 0.80015 0.97533 1.04276 1.19803 0.82340 0.90071 0.77429 1.90792 1.62074 1.37737 1.46951 1.47728 1.04923 1.07910 1.74263 1.21970 0.96363 0.86413 1.02688 1.21546 0.98319 0.83301 0.96142 1.22744 0.98243 0.96675 0.97157 0.88818 1.23047 0.98137 0.95454 0.99180 1.23356 0.95938 0.81497 0.97823 0.90258 1.86522 1.67977 1.26689 1.55397 1.23696 0.96699 0.97863 1.00953 1.20794 1.02152 0.88994 1.01908 1.20397 0.91977 0.83127 1.15390 1.43379 1.00983 1.02620 0.97917 1.94537 0.95803 1.93720 1.54381 1.94577 1.64443 1.24065 1.51868 1.20096 0.91596 0.97054 0.95766 1.25469 1.08479 0.93243 0.91212 1.86714 1.86598 1.43394 1.15176 0.95567 0.76340 0.85232 0.85426 1.20898 1.00498 0.89596 1.08553 0.86774 0.91738 0.91360 0.88399 0.88406 0.91680 0.90046 0.90942 0.89705 0.89177 0.90585 0.88847 0.77353 0.88486 0.91806 0.81729 0.84411 0.77982 1.17641 1.16585 0.82023 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.28 -0.06 10.28 -34.25 -0.35 -0.41 16 3 C 0.17 -0.02 6.70 -39.12 -0.26 -0.28 16 4 C 0.11 0.06 6.70 -39.12 -0.26 -0.20 16 5 O -0.26 -0.48 9.45 -47.33 -0.45 -0.93 16 6 C 0.03 -0.04 3.78 36.00 0.14 0.10 16 7 C 0.52 0.55 7.75 -10.98 -0.09 0.46 16 8 O -0.50 -2.66 15.35 -14.35 -0.22 -2.88 16 9 N -0.61 0.91 2.87 -181.57 -0.52 0.38 16 10 C 0.07 -0.33 10.24 59.85 0.61 0.29 16 11 C 0.13 -0.16 5.24 -4.04 -0.02 -0.18 16 12 C -0.13 0.15 3.96 -89.81 -0.36 -0.20 16 13 H 0.09 -0.18 8.14 -51.93 -0.42 -0.61 16 14 C -0.12 0.08 7.47 -25.92 -0.19 -0.12 16 15 C 0.07 0.01 5.21 -25.92 -0.14 -0.12 16 16 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 17 O -0.56 -0.94 13.67 -35.23 -0.48 -1.42 16 18 C -0.15 -0.12 6.88 -25.92 -0.18 -0.30 16 19 C -0.12 0.00 8.54 -39.46 -0.34 -0.33 16 20 C -0.02 -0.04 6.85 -79.95 -0.55 -0.59 16 21 N 0.03 0.13 4.45 33.96 0.15 0.28 16 22 O -0.17 -0.82 18.44 -29.46 -0.54 -1.36 16 23 O -0.13 -0.69 14.62 -35.97 -0.53 -1.22 16 24 C -0.04 0.01 5.26 -104.62 -0.55 -0.54 16 25 C -0.07 0.01 1.74 36.00 0.06 0.07 16 26 O -0.52 -0.14 11.80 -55.48 -0.65 -0.80 16 27 Si 0.67 -1.50 29.91 -169.99 -5.08 -6.58 16 28 C -0.18 0.35 7.65 -39.46 -0.30 0.04 16 29 H 0.11 -0.58 8.14 -51.93 -0.42 -1.01 16 30 H 0.06 -0.34 7.66 -51.93 -0.40 -0.74 16 31 H 0.07 -0.43 7.66 -51.93 -0.40 -0.83 16 32 H 0.10 -0.34 7.62 -51.93 -0.40 -0.74 16 33 H 0.10 -0.36 6.92 -51.93 -0.36 -0.72 16 34 H 0.06 -0.35 8.14 -51.93 -0.42 -0.77 16 35 H 0.08 -0.46 8.07 -51.93 -0.42 -0.88 16 36 H 0.07 -0.43 6.44 -51.92 -0.33 -0.77 16 37 H 0.08 -0.26 8.07 -51.93 -0.42 -0.68 16 38 H 0.09 0.08 7.12 -51.93 -0.37 -0.29 16 39 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 40 H 0.09 0.01 8.10 -51.93 -0.42 -0.41 16 41 H 0.38 -0.83 9.12 45.56 0.42 -0.41 16 42 H 0.10 0.30 7.75 -51.93 -0.40 -0.11 16 43 H 0.06 0.07 8.14 -51.93 -0.42 -0.35 16 44 H 0.17 -0.32 5.85 -52.49 -0.31 -0.63 16 45 H 0.14 0.22 6.07 -51.93 -0.32 -0.10 16 46 H 0.37 -1.60 8.70 45.56 0.40 -1.20 16 47 H -0.25 0.05 7.11 56.52 0.40 0.45 16 48 H -0.24 -0.27 7.11 56.52 0.40 0.13 16 49 H 0.16 -0.81 3.36 -52.49 -0.18 -0.99 16 LS Contribution 406.24 15.07 6.12 6.12 Total: 0.00 -12.85 406.24 -9.62 -22.47 By element: Atomic # 1 Polarization: -7.06 SS G_CDS: -5.64 Total: -12.70 kcal Atomic # 6 Polarization: 0.47 SS G_CDS: -1.43 Total: -0.96 kcal Atomic # 7 Polarization: 1.04 SS G_CDS: -0.37 Total: 0.67 kcal Atomic # 8 Polarization: -5.80 SS G_CDS: -3.23 Total: -9.02 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.08 Total: -6.58 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -12.85 -9.62 -22.47 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12312124_4549636.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.484 kcal (2) G-P(sol) polarization free energy of solvation -12.848 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.332 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.622 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.470 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.954 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds