Wall clock time and date at job start Tue Mar 9 2021 12:59:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42901 * 113.99625 * 2 1 4 4 H 1.08999 * 112.85136 * 18.80551 * 3 2 1 5 5 C 1.53782 * 113.61295 * 150.00161 * 3 2 1 6 6 C 1.53784 * 87.07940 * 89.19784 * 5 3 2 7 7 H 1.08995 * 113.61820 * 270.79554 * 6 5 3 8 8 N 1.46505 * 113.61249 * 139.97949 * 6 5 3 9 9 C 1.34777 * 120.00115 * 155.00034 * 8 6 5 10 10 O 1.21282 * 119.99620 * 359.97438 * 9 8 6 11 11 C 1.50697 * 120.00369 * 180.02562 * 9 8 6 12 12 C 1.52997 * 109.47466 * 180.02562 * 11 9 8 13 13 O 1.42898 * 109.47319 * 180.02562 * 12 11 9 14 14 C 1.35900 * 117.00172 * 179.97438 * 13 12 11 15 15 C 1.38713 * 120.05537 * 179.71958 * 14 13 12 16 16 C 1.38163 * 119.94209 * 179.67539 * 15 14 13 17 17 C 1.50703 * 119.97487 * 180.32298 * 16 15 14 18 18 O 1.42898 * 109.46854 * 300.30240 * 17 16 15 19 19 Si 1.86301 * 109.47322 * 180.30256 * 17 16 15 20 20 C 1.38248 * 120.05642 * 0.63026 * 16 15 14 21 21 C 1.38290 * 120.11056 * 359.67083 * 20 16 15 22 22 C 1.38124 * 120.05419 * 0.02562 * 21 20 16 23 23 C 1.53780 * 87.08078 * 25.43375 * 6 5 3 24 24 H 1.08997 * 109.47304 * 60.00178 * 1 2 3 25 25 H 1.08998 * 109.46874 * 180.02562 * 1 2 3 26 26 H 1.09002 * 109.47165 * 299.99594 * 1 2 3 27 27 H 1.08994 * 113.61586 * 334.65389 * 5 3 2 28 28 H 1.09000 * 113.69089 * 203.75487 * 5 3 2 29 29 H 0.97003 * 120.00244 * 335.00064 * 8 6 5 30 30 H 1.09002 * 109.47120 * 59.99760 * 11 9 8 31 31 H 1.08998 * 109.46862 * 300.00562 * 11 9 8 32 32 H 1.09002 * 109.47153 * 59.99773 * 12 11 9 33 33 H 1.09001 * 109.46832 * 299.99964 * 12 11 9 34 34 H 1.07996 * 120.02798 * 0.02562 * 15 14 13 35 35 H 1.09003 * 109.46652 * 60.30380 * 17 16 15 36 36 H 0.96696 * 114.00448 * 299.99633 * 18 17 16 37 37 H 1.48493 * 110.00194 * 180.02562 * 19 17 16 38 38 H 1.48498 * 110.00043 * 301.32030 * 19 17 16 39 39 H 1.07997 * 119.94834 * 179.69938 * 20 16 15 40 40 H 1.08001 * 119.97430 * 180.02562 * 21 20 16 41 41 H 1.08006 * 120.02821 * 179.97438 * 22 21 20 42 42 H 1.09005 * 113.61632 * 89.11370 * 23 6 5 43 43 H 1.08997 * 113.61177 * 220.01145 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 1 1.3136 2.0789 0.3238 5 6 3.3755 1.3720 0.7045 6 6 4.0062 1.0353 -0.6571 7 1 4.1106 -0.0345 -0.8374 8 7 5.2358 1.7817 -0.9348 9 6 6.1520 1.2785 -1.7857 10 8 5.9586 0.2075 -2.3210 11 6 7.4171 2.0459 -2.0710 12 6 8.2780 1.2599 -3.0619 13 8 9.4780 1.9874 -3.3319 14 6 10.3595 1.4235 -4.1990 15 6 11.5421 2.0777 -4.5111 16 6 12.4397 1.4992 -5.3877 17 6 13.7282 2.2060 -5.7216 18 8 13.4365 3.4770 -6.3060 19 14 14.7061 1.1774 -6.9284 20 6 12.1541 0.2753 -5.9638 21 6 10.9729 -0.3761 -5.6591 22 6 10.0751 0.1952 -4.7785 23 6 2.7530 1.6511 -1.3014 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 3.5176 0.5950 1.4555 28 1 3.6316 2.3663 1.0704 29 1 5.3907 2.6381 -0.5064 30 1 7.9710 2.1912 -1.1434 31 1 7.1648 3.0160 -2.4991 32 1 7.7240 1.1150 -3.9893 33 1 8.5303 0.2896 -2.6340 34 1 11.7637 3.0359 -4.0648 35 1 14.3102 2.3495 -4.8113 36 1 12.9196 3.4257 -7.1216 37 1 15.9794 1.8632 -7.2652 38 1 14.9884 -0.1587 -6.3449 39 1 12.8547 -0.1730 -6.6525 40 1 10.7521 -1.3322 -6.1101 41 1 9.1525 -0.3137 -4.5412 42 1 2.8377 2.7224 -1.4845 43 1 2.3926 1.0996 -2.1696 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_4549614.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:03 Heat of formation + Delta-G solvation = -93.128714 kcal Electronic energy + Delta-G solvation = -24222.558067 eV Core-core repulsion = 20428.962889 eV Total energy + Delta-G solvation = -3793.595179 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.150 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -41.46849 -41.11329 -39.97418 -39.02917 -37.27636 -37.14036 -34.28676 -33.11191 -32.39775 -30.77078 -27.81934 -27.05822 -26.85611 -26.12631 -24.43670 -23.60671 -22.05269 -21.48731 -20.86648 -19.29437 -18.22057 -18.11632 -17.60095 -17.46642 -17.10788 -17.00484 -16.72956 -16.32517 -16.14707 -16.05260 -15.78649 -15.36005 -14.91440 -14.77950 -14.65616 -14.33989 -14.15082 -14.05916 -13.59534 -13.43770 -13.28557 -13.13469 -12.91505 -12.80236 -12.51261 -12.33498 -12.06475 -11.89231 -11.78998 -11.57455 -11.51838 -10.94919 -10.60371 -10.47151 -10.11028 -9.85261 -9.18993 -5.00431 0.27057 0.46348 1.30354 1.52195 1.66156 1.72223 1.99632 2.49151 2.56068 2.73695 3.37394 3.48119 3.49133 3.52565 3.67615 3.71671 3.84146 3.86550 3.93833 3.96902 4.09976 4.20928 4.25762 4.31809 4.36588 4.38333 4.38992 4.49708 4.53834 4.59977 4.62841 4.68357 4.71448 4.73499 4.85991 4.94307 4.99970 5.03107 5.32225 5.41801 5.43479 5.49634 5.73774 6.13813 6.35654 6.42871 6.59210 7.11009 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.369 6.369 3 C 0.065 3.935 4 H 0.082 0.918 5 C -0.148 4.148 6 C 0.129 3.871 7 H 0.121 0.879 8 N -0.720 5.720 9 C 0.521 3.479 10 O -0.537 6.537 11 C -0.142 4.142 12 C 0.074 3.926 13 O -0.316 6.316 14 C 0.133 3.867 15 C -0.126 4.126 16 C -0.083 4.083 17 C -0.069 4.069 18 O -0.539 6.539 19 Si 0.693 3.307 20 C -0.156 4.156 21 C -0.073 4.073 22 C -0.202 4.202 23 C -0.172 4.172 24 H 0.044 0.956 25 H 0.089 0.911 26 H 0.044 0.956 27 H 0.086 0.914 28 H 0.098 0.902 29 H 0.403 0.597 30 H 0.107 0.893 31 H 0.107 0.893 32 H 0.073 0.927 33 H 0.072 0.928 34 H 0.134 0.866 35 H 0.115 0.885 36 H 0.380 0.620 37 H -0.255 1.255 38 H -0.258 1.258 39 H 0.128 0.872 40 H 0.131 0.869 41 H 0.133 0.867 42 H 0.093 0.907 43 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.911 2.348 0.508 4.589 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.287 6.287 3 C 0.006 3.994 4 H 0.100 0.900 5 C -0.186 4.186 6 C 0.024 3.976 7 H 0.139 0.861 8 N -0.371 5.371 9 C 0.307 3.693 10 O -0.413 6.413 11 C -0.182 4.182 12 C -0.001 4.001 13 O -0.230 6.230 14 C 0.087 3.913 15 C -0.144 4.144 16 C -0.083 4.083 17 C -0.180 4.180 18 O -0.344 6.344 19 Si 0.595 3.405 20 C -0.174 4.174 21 C -0.091 4.091 22 C -0.221 4.221 23 C -0.211 4.211 24 H 0.062 0.938 25 H 0.108 0.892 26 H 0.063 0.937 27 H 0.104 0.896 28 H 0.117 0.883 29 H 0.238 0.762 30 H 0.125 0.875 31 H 0.126 0.874 32 H 0.091 0.909 33 H 0.091 0.909 34 H 0.152 0.848 35 H 0.132 0.868 36 H 0.227 0.773 37 H -0.180 1.180 38 H -0.183 1.183 39 H 0.145 0.855 40 H 0.148 0.852 41 H 0.150 0.850 42 H 0.112 0.888 43 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -2.840 1.349 0.595 3.200 hybrid contribution -0.546 0.597 0.864 1.184 sum -3.386 1.946 1.459 4.169 Atomic orbital electron populations 1.22860 0.80315 1.03246 1.00209 1.87902 1.20229 1.26054 1.94532 1.22850 0.94270 0.85828 0.96464 0.90014 1.23627 0.94412 1.03330 0.97263 1.22546 0.81675 0.98148 0.95188 0.86108 1.45983 1.20188 1.24224 1.46724 1.20331 0.84394 0.85897 0.78659 1.90756 1.78372 1.22084 1.50110 1.21480 0.93994 1.00771 1.01952 1.22418 0.83605 0.94846 0.99252 1.85974 1.29692 1.47445 1.59915 1.18964 0.89977 0.92040 0.90289 1.20230 0.92262 1.01265 1.00683 1.20129 0.96436 0.94988 0.96753 1.25106 0.97897 0.90768 1.04223 1.86504 1.76787 1.26990 1.44161 0.94591 0.81100 0.77788 0.87008 1.20930 0.98352 0.95794 1.02282 1.20932 0.92890 0.99364 0.95905 1.21401 1.02247 0.96453 1.02018 1.23990 0.96467 1.01866 0.98749 0.93754 0.89232 0.93715 0.89569 0.88339 0.76239 0.87454 0.87447 0.90872 0.90933 0.84827 0.86757 0.77308 1.18007 1.18298 0.85457 0.85153 0.84962 0.88827 0.90135 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 2 O -0.37 -0.51 10.64 -35.23 -0.37 -0.88 16 3 C 0.06 -0.06 4.37 -25.92 -0.11 -0.17 16 4 H 0.08 -0.20 7.87 -51.93 -0.41 -0.61 16 5 C -0.15 0.27 7.66 -25.92 -0.20 0.07 16 6 C 0.13 -0.02 4.18 -67.11 -0.28 -0.30 16 7 H 0.12 0.32 7.46 -51.93 -0.39 -0.07 16 8 N -0.72 1.06 5.35 -53.02 -0.28 0.78 16 9 C 0.52 0.40 7.83 -10.99 -0.09 0.31 16 10 O -0.54 -2.67 15.58 5.56 0.09 -2.59 16 11 C -0.14 0.21 6.07 -27.89 -0.17 0.04 16 12 C 0.07 0.05 4.03 37.16 0.15 0.20 16 13 O -0.32 -0.70 10.14 -19.43 -0.20 -0.90 16 14 C 0.13 0.34 6.69 -39.22 -0.26 0.07 16 15 C -0.13 -0.29 9.55 -39.43 -0.38 -0.67 16 16 C -0.08 -0.10 5.39 -104.64 -0.56 -0.66 16 17 C -0.07 -0.03 2.82 36.01 0.10 0.07 16 18 O -0.54 -0.43 12.76 -35.23 -0.45 -0.88 16 19 Si 0.69 -0.43 29.79 -169.99 -5.06 -5.49 16 20 C -0.16 -0.07 8.67 -39.56 -0.34 -0.42 16 21 C -0.07 -0.05 10.04 -39.60 -0.40 -0.45 16 22 C -0.20 -0.33 9.04 -39.43 -0.36 -0.68 16 23 C -0.17 0.14 7.71 -25.92 -0.20 -0.06 16 24 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 25 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 26 H 0.04 -0.09 8.14 -51.93 -0.42 -0.52 16 27 H 0.09 -0.08 8.14 -51.93 -0.42 -0.51 16 28 H 0.10 -0.39 8.12 -51.93 -0.42 -0.81 16 29 H 0.40 -1.81 8.73 -40.82 -0.36 -2.17 16 30 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 31 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 32 H 0.07 0.07 7.62 -51.93 -0.40 -0.32 16 33 H 0.07 0.08 7.62 -51.93 -0.40 -0.31 16 34 H 0.13 0.30 8.06 -52.49 -0.42 -0.12 16 35 H 0.12 0.09 7.96 -51.93 -0.41 -0.32 16 36 H 0.38 -1.16 8.70 45.56 0.40 -0.76 16 37 H -0.25 -0.64 7.11 56.52 0.40 -0.24 16 38 H -0.26 -0.44 7.11 56.52 0.40 -0.04 16 39 H 0.13 -0.18 4.87 -52.49 -0.26 -0.44 16 40 H 0.13 -0.18 8.06 -52.49 -0.42 -0.61 16 41 H 0.13 0.10 6.30 -52.48 -0.33 -0.23 16 42 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 43 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 LS Contribution 359.86 15.07 5.42 5.42 Total: 0.00 -8.49 359.86 -9.25 -17.75 By element: Atomic # 1 Polarization: -5.23 SS G_CDS: -6.39 Total: -11.62 kcal Atomic # 6 Polarization: 0.42 SS G_CDS: -2.00 Total: -1.58 kcal Atomic # 7 Polarization: 1.06 SS G_CDS: -0.28 Total: 0.78 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -0.93 Total: -5.25 kcal Atomic # 14 Polarization: -0.43 SS G_CDS: -5.06 Total: -5.49 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -8.49 -9.25 -17.75 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_4549614.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.383 kcal (2) G-P(sol) polarization free energy of solvation -8.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.876 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.253 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.745 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.129 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds