Wall clock time and date at job start Tue Mar 9 2021 12:59:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.42912 * 113.99923 * 2 1 4 4 H 1.08999 * 112.90229 * 341.25149 * 3 2 1 5 5 C 1.53781 * 113.61510 * 112.50457 * 3 2 1 6 6 C 1.53771 * 87.08224 * 139.98217 * 5 3 2 7 7 H 1.08993 * 113.69204 * 220.00981 * 6 5 3 8 8 N 1.46497 * 113.61706 * 89.11377 * 6 5 3 9 9 C 1.34773 * 120.00371 * 107.50155 * 8 6 5 10 10 O 1.21702 * 119.99724 * 0.02562 * 9 8 6 11 11 C 1.46652 * 120.00630 * 180.02562 * 9 8 6 12 12 C 1.36544 * 125.99071 * 180.02562 * 11 9 8 13 13 C 1.50702 * 126.64703 * 359.97438 * 12 11 9 14 14 C 1.40370 * 106.70810 * 179.97438 * 12 11 9 15 15 C 1.35135 * 107.11413 * 0.02562 * 14 12 11 16 16 C 1.50693 * 125.61399 * 180.02562 * 15 14 12 17 17 O 1.42900 * 109.47523 * 89.99552 * 16 15 14 18 18 C 1.35892 * 117.00484 * 179.97438 * 17 16 15 19 19 C 1.38732 * 120.05920 * 180.02562 * 18 17 16 20 20 C 1.38149 * 119.94758 * 179.97438 * 19 18 17 21 21 C 1.38269 * 120.05054 * 0.02562 * 20 19 18 22 22 C 1.50700 * 119.93900 * 179.97438 * 21 20 19 23 23 O 1.42896 * 109.47341 * 300.00123 * 22 21 20 24 24 Si 1.86300 * 109.46849 * 180.02562 * 22 21 20 25 25 C 1.38264 * 120.11486 * 0.27666 * 21 20 19 26 26 C 1.38143 * 120.05501 * 359.44957 * 25 21 20 27 27 O 1.33929 * 108.76530 * 0.26288 * 15 14 12 28 28 C 1.53774 * 113.61336 * 209.99959 * 3 2 1 29 29 H 1.09002 * 109.47519 * 60.00045 * 1 2 3 30 30 H 1.09003 * 109.47046 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.47031 * 299.99930 * 1 2 3 32 32 H 1.09004 * 113.61318 * 25.42737 * 5 3 2 33 33 H 1.09006 * 113.61064 * 254.53166 * 5 3 2 34 34 H 0.97004 * 119.99879 * 287.50561 * 8 6 5 35 35 H 1.08996 * 109.46824 * 270.00490 * 13 12 11 36 36 H 1.09001 * 109.46590 * 29.99856 * 13 12 11 37 37 H 1.09001 * 109.47177 * 149.99883 * 13 12 11 38 38 H 1.07997 * 126.44276 * 179.97438 * 14 12 11 39 39 H 1.09008 * 109.47376 * 329.99797 * 16 15 14 40 40 H 1.08998 * 109.46915 * 209.99722 * 16 15 14 41 41 H 1.08000 * 120.02660 * 359.96129 * 19 18 17 42 42 H 1.07992 * 119.97601 * 179.97438 * 20 19 18 43 43 H 1.09000 * 109.46989 * 60.00454 * 22 21 20 44 44 H 0.96693 * 114.00306 * 299.99773 * 23 22 21 45 45 H 1.48506 * 110.00048 * 58.68772 * 24 22 21 46 46 H 1.48502 * 109.99996 * 180.02562 * 24 22 21 47 47 H 1.08003 * 119.97236 * 179.73093 * 25 21 20 48 48 H 1.08000 * 120.02735 * 180.28019 * 26 25 21 49 49 H 1.09008 * 113.61184 * 105.46937 * 28 3 2 50 50 H 1.09005 * 113.69670 * 334.57811 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3056 0.0000 4 1 1.3141 2.0798 -0.3227 5 6 2.7534 1.6490 1.3017 6 6 3.8226 2.3183 0.4222 7 1 4.8429 2.1410 0.7620 8 7 3.5531 3.7310 0.1436 9 6 4.2932 4.6881 0.7373 10 8 5.1858 4.3787 1.5046 11 6 4.0231 6.1024 0.4589 12 6 4.6938 7.1670 0.9893 13 6 5.8418 7.1118 1.9641 14 6 4.1068 8.3227 0.4508 15 6 3.1157 7.9181 -0.3739 16 6 2.2131 8.8237 -1.1714 17 8 2.7982 9.0726 -2.4512 18 6 2.1060 9.8768 -3.3002 19 6 2.6153 10.1603 -4.5591 20 6 1.9095 10.9777 -5.4206 21 6 0.6966 11.5137 -5.0287 22 6 -0.0709 12.4055 -5.9702 23 8 0.7226 13.5480 -6.2974 24 14 -1.6496 12.9606 -5.1513 25 6 0.1899 11.2378 -3.7722 26 6 0.8891 10.4164 -2.9092 27 8 3.0645 6.5798 -0.3617 28 6 3.3754 1.3720 -0.7045 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 3.1166 0.7741 1.8410 33 1 2.2139 2.3478 1.9412 34 1 2.8419 3.9776 -0.4682 35 1 5.4544 7.1263 2.9828 36 1 6.4101 6.1955 1.8045 37 1 6.4911 7.9736 1.8099 38 1 4.3928 9.3434 0.6574 39 1 2.0845 9.7673 -0.6410 40 1 1.2425 8.3453 -1.3025 41 1 3.5629 9.7424 -4.8654 42 1 2.3057 11.1990 -6.4005 43 1 -0.3076 11.8547 -6.8805 44 1 0.9710 14.0862 -5.5335 45 1 -1.3411 13.6856 -3.8925 46 1 -2.4161 13.8404 -6.0698 47 1 -0.7556 11.6611 -3.4668 48 1 0.4907 10.1975 -1.9295 49 1 3.3382 1.8472 -1.6848 50 1 3.9098 0.4220 -0.7147 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_4549632.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:12 Heat of formation + Delta-G solvation = -69.205534 kcal Electronic energy + Delta-G solvation = -32793.571389 eV Core-core repulsion = 28142.115365 eV Total energy + Delta-G solvation = -4651.456024 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.165 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.92941 -41.42342 -41.27755 -39.71279 -39.32238 -37.37927 -37.34348 -35.33750 -34.06923 -33.18517 -32.12814 -31.57847 -28.90948 -28.53638 -27.71381 -26.84469 -26.30618 -25.22724 -24.16746 -23.04016 -22.62216 -22.32419 -20.91648 -20.60679 -19.58591 -19.34386 -18.48478 -17.96891 -17.52469 -17.40360 -17.14163 -16.88148 -16.76539 -16.60586 -16.24393 -16.19248 -15.99273 -15.68972 -15.53240 -15.33637 -14.82406 -14.71475 -14.41927 -14.32633 -14.19200 -14.04750 -13.81905 -13.74630 -13.65931 -13.56141 -13.54525 -13.42058 -13.39455 -12.81232 -12.30415 -12.27005 -12.21383 -12.18446 -12.04996 -11.68371 -11.62225 -11.21358 -10.79784 -10.64277 -10.53105 -10.28347 -10.12193 -9.69347 -9.31887 -5.01733 -0.22406 0.20160 0.21930 0.96389 1.24178 1.33551 1.53892 1.90880 1.92157 2.04088 2.27990 2.57166 2.77403 3.21225 3.33140 3.34138 3.44736 3.55641 3.57771 3.63221 3.68729 3.73772 3.78625 3.80761 3.85029 3.89988 4.19298 4.28298 4.29602 4.35523 4.38112 4.39989 4.43346 4.47587 4.58026 4.59748 4.67480 4.70557 4.71494 4.76881 4.80132 4.86961 4.87749 4.92309 4.95877 5.06863 5.09191 5.16693 5.30031 5.42123 5.42700 5.59918 5.68799 6.17650 6.17697 6.29715 6.36713 6.95027 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.375 6.375 3 C 0.059 3.941 4 H 0.086 0.914 5 C -0.165 4.165 6 C 0.120 3.880 7 H 0.116 0.884 8 N -0.705 5.705 9 C 0.610 3.390 10 O -0.508 6.508 11 C -0.075 4.075 12 C -0.081 4.081 13 C -0.098 4.098 14 C -0.183 4.183 15 C 0.012 3.988 16 C 0.139 3.861 17 O -0.308 6.308 18 C 0.135 3.865 19 C -0.147 4.147 20 C -0.051 4.051 21 C -0.154 4.154 22 C -0.070 4.070 23 O -0.530 6.530 24 Si 0.681 3.319 25 C -0.075 4.075 26 C -0.205 4.205 27 O -0.156 6.156 28 C -0.142 4.142 29 H 0.042 0.958 30 H 0.087 0.913 31 H 0.042 0.958 32 H 0.104 0.896 33 H 0.074 0.926 34 H 0.406 0.594 35 H 0.078 0.922 36 H 0.089 0.911 37 H 0.071 0.929 38 H 0.162 0.838 39 H 0.102 0.898 40 H 0.087 0.913 41 H 0.135 0.865 42 H 0.135 0.865 43 H 0.118 0.882 44 H 0.376 0.624 45 H -0.261 1.261 46 H -0.257 1.257 47 H 0.131 0.869 48 H 0.133 0.867 49 H 0.080 0.920 50 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.490 0.303 0.326 4.512 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.293 6.293 3 C 0.001 3.999 4 H 0.104 0.896 5 C -0.204 4.204 6 C 0.015 3.985 7 H 0.134 0.866 8 N -0.356 5.356 9 C 0.396 3.604 10 O -0.385 6.385 11 C -0.128 4.128 12 C -0.084 4.084 13 C -0.155 4.155 14 C -0.202 4.202 15 C -0.040 4.040 16 C 0.065 3.935 17 O -0.222 6.222 18 C 0.090 3.910 19 C -0.165 4.165 20 C -0.069 4.069 21 C -0.154 4.154 22 C -0.180 4.180 23 O -0.337 6.337 24 Si 0.583 3.417 25 C -0.092 4.092 26 C -0.224 4.224 27 O -0.053 6.053 28 C -0.180 4.180 29 H 0.061 0.939 30 H 0.106 0.894 31 H 0.061 0.939 32 H 0.122 0.878 33 H 0.093 0.907 34 H 0.241 0.759 35 H 0.096 0.904 36 H 0.107 0.893 37 H 0.090 0.910 38 H 0.179 0.821 39 H 0.120 0.880 40 H 0.105 0.895 41 H 0.152 0.848 42 H 0.153 0.847 43 H 0.136 0.864 44 H 0.223 0.777 45 H -0.185 1.185 46 H -0.182 1.182 47 H 0.148 0.852 48 H 0.151 0.849 49 H 0.099 0.901 50 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -4.304 0.046 0.378 4.321 hybrid contribution 0.154 1.253 0.035 1.263 sum -4.150 1.299 0.413 4.368 Atomic orbital electron populations 1.22824 0.80856 1.03110 1.00010 1.87959 1.19914 1.26932 1.94534 1.23830 0.93851 0.85610 0.96576 0.89589 1.23990 0.97603 1.01360 0.97490 1.21706 1.00812 0.78966 0.97057 0.86589 1.45586 1.36854 1.05585 1.47595 1.16447 0.81726 0.81799 0.80389 1.90890 1.31206 1.80820 1.35562 1.21818 0.95217 0.94400 1.01322 1.20696 0.98346 0.90727 0.98612 1.20488 0.94275 1.04144 0.96546 1.21617 0.97280 1.00452 1.00835 1.21895 1.00512 0.80761 1.00830 1.20945 0.93952 0.96631 0.82002 1.86152 1.46959 1.64162 1.24906 1.18991 0.90924 0.90889 0.90195 1.20532 1.02065 1.02178 0.91751 1.20866 0.93141 0.93674 0.99248 1.20214 0.97460 1.02144 0.95632 1.24956 1.01837 0.87881 1.03334 1.86599 1.71371 1.38710 1.36976 0.95114 0.79621 0.88205 0.78795 1.20803 0.98792 0.96780 0.92839 1.21189 0.96053 1.03356 1.01752 1.83966 1.46686 1.21022 1.53590 1.23628 0.95783 1.00485 0.98117 0.93903 0.89411 0.93937 0.87784 0.90710 0.75929 0.90385 0.89268 0.91014 0.82052 0.88027 0.89487 0.84752 0.84742 0.86400 0.77655 1.18549 1.18204 0.85202 0.84939 0.90137 0.87260 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.07 16 2 O -0.38 -0.51 10.71 -35.23 -0.38 -0.89 16 3 C 0.06 -0.04 4.19 -25.92 -0.11 -0.14 16 4 H 0.09 -0.17 7.87 -51.93 -0.41 -0.58 16 5 C -0.17 0.05 7.71 -25.92 -0.20 -0.15 16 6 C 0.12 -0.02 4.32 -67.12 -0.29 -0.32 16 7 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 8 N -0.71 -0.04 5.26 -54.34 -0.29 -0.32 16 9 C 0.61 1.59 7.79 -12.87 -0.10 1.49 16 10 O -0.51 -2.61 14.34 5.19 0.07 -2.54 16 11 C -0.08 -0.17 7.13 -36.80 -0.26 -0.43 16 12 C -0.08 -0.15 6.20 -104.43 -0.65 -0.80 16 13 C -0.10 -0.10 9.82 36.01 0.35 0.25 16 14 C -0.18 -0.07 10.73 -39.88 -0.43 -0.50 16 15 C 0.01 0.00 6.94 -35.42 -0.25 -0.24 16 16 C 0.14 -0.26 5.27 36.00 0.19 -0.07 16 17 O -0.31 -0.20 10.12 -19.40 -0.20 -0.40 16 18 C 0.13 0.03 6.69 -39.21 -0.26 -0.23 16 19 C -0.15 -0.05 9.99 -39.43 -0.39 -0.45 16 20 C -0.05 0.00 9.60 -39.60 -0.38 -0.38 16 21 C -0.15 0.09 5.39 -104.60 -0.56 -0.48 16 22 C -0.07 0.06 2.82 36.01 0.10 0.16 16 23 O -0.53 -0.39 12.76 -35.23 -0.45 -0.84 16 24 Si 0.68 -1.04 29.78 -169.99 -5.06 -6.10 16 25 C -0.07 0.10 8.66 -39.61 -0.34 -0.25 16 26 C -0.20 0.26 9.04 -39.43 -0.36 -0.10 16 27 O -0.16 -0.21 10.40 4.99 0.05 -0.16 16 28 C -0.14 0.16 7.66 -25.92 -0.20 -0.04 16 29 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 30 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 31 H 0.04 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 34 H 0.41 -0.70 8.46 -40.82 -0.35 -1.04 16 35 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 36 H 0.09 0.22 6.44 -51.93 -0.33 -0.11 16 37 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 38 H 0.16 -0.28 8.06 -52.49 -0.42 -0.71 16 39 H 0.10 -0.42 7.66 -51.92 -0.40 -0.82 16 40 H 0.09 -0.30 7.66 -51.93 -0.40 -0.70 16 41 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 42 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 43 H 0.12 -0.17 7.96 -51.93 -0.41 -0.59 16 44 H 0.38 -0.75 8.70 45.56 0.40 -0.36 16 45 H -0.26 -0.09 7.11 56.52 0.40 0.31 16 46 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 47 H 0.13 -0.40 4.87 -52.48 -0.26 -0.66 16 48 H 0.13 -0.48 6.30 -52.49 -0.33 -0.82 16 49 H 0.08 -0.15 8.14 -51.92 -0.42 -0.57 16 50 H 0.11 -0.11 8.14 -51.93 -0.42 -0.54 16 LS Contribution 419.21 15.07 6.32 6.32 Total: 0.00 -8.21 419.21 -10.11 -18.32 By element: Atomic # 1 Polarization: -4.66 SS G_CDS: -7.15 Total: -11.80 kcal Atomic # 6 Polarization: 1.45 SS G_CDS: -3.04 Total: -1.59 kcal Atomic # 7 Polarization: -0.04 SS G_CDS: -0.29 Total: -0.32 kcal Atomic # 8 Polarization: -3.93 SS G_CDS: -0.90 Total: -4.82 kcal Atomic # 14 Polarization: -1.04 SS G_CDS: -5.06 Total: -6.10 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -8.21 -10.11 -18.32 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_4549632.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.881 kcal (2) G-P(sol) polarization free energy of solvation -8.211 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -59.091 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.114 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.325 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.206 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds