Wall clock time and date at job start Tue Mar 9 2021 12:59:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42902 * 113.99784 * 2 1 4 4 H 1.08999 * 112.90578 * 18.75455 * 3 2 1 5 5 C 1.53782 * 113.61259 * 150.00069 * 3 2 1 6 6 C 1.53785 * 87.08111 * 89.11727 * 5 3 2 7 7 H 1.09003 * 113.61303 * 270.80203 * 6 5 3 8 8 N 1.46497 * 113.61126 * 139.98069 * 6 5 3 9 9 C 1.34780 * 119.99566 * 155.00450 * 8 6 5 10 10 O 1.21280 * 120.00423 * 359.97438 * 9 8 6 11 11 C 1.50701 * 119.99795 * 180.02562 * 9 8 6 12 12 O 1.42903 * 109.46878 * 179.97438 * 11 9 8 13 13 C 1.35904 * 116.99628 * 179.97438 * 12 11 9 14 14 C 1.38710 * 120.05175 * 179.72355 * 13 12 11 15 15 N 1.48002 * 120.03373 * 0.02638 * 14 13 12 16 16 O 1.21793 * 120.00618 * 180.02562 * 15 14 13 17 17 O 1.21803 * 119.99564 * 359.97438 * 15 14 13 18 18 C 1.38171 * 119.94209 * 179.79075 * 14 13 12 19 19 C 1.38245 * 120.05423 * 0.48906 * 18 14 13 20 20 C 1.50700 * 119.94584 * 179.72089 * 19 18 14 21 21 O 1.42906 * 109.47140 * 300.02247 * 20 19 18 22 22 Si 1.86305 * 109.47283 * 180.02562 * 20 19 18 23 23 C 1.38285 * 120.11229 * 359.74310 * 19 18 14 24 24 C 1.38130 * 120.05636 * 0.02562 * 23 19 18 25 25 C 1.53783 * 113.61472 * 247.49952 * 3 2 1 26 26 H 1.09003 * 109.47020 * 179.97438 * 1 2 3 27 27 H 1.08999 * 109.47210 * 299.99490 * 1 2 3 28 28 H 1.09004 * 109.47230 * 59.99862 * 1 2 3 29 29 H 1.09004 * 113.61426 * 334.57192 * 5 3 2 30 30 H 1.08991 * 113.61599 * 203.66822 * 5 3 2 31 31 H 0.96995 * 120.00423 * 334.99756 * 8 6 5 32 32 H 1.09002 * 109.47060 * 299.99722 * 11 9 8 33 33 H 1.09001 * 109.47380 * 59.99809 * 11 9 8 34 34 H 1.07999 * 119.97360 * 180.22844 * 18 14 13 35 35 H 1.09000 * 109.47313 * 60.02089 * 20 19 18 36 36 H 0.96694 * 113.99511 * 179.97438 * 21 20 19 37 37 H 1.48505 * 109.99705 * 60.00208 * 22 20 19 38 38 H 1.48498 * 109.99820 * 181.31715 * 22 20 19 39 39 H 1.08007 * 119.97136 * 179.97438 * 23 19 18 40 40 H 1.07998 * 120.02612 * 179.97438 * 24 23 19 41 41 H 1.08994 * 113.61317 * 156.34131 * 25 3 2 42 42 H 1.08991 * 113.61491 * 25.43318 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3142 2.0797 0.3228 5 6 3.3755 1.3719 0.7045 6 6 4.0061 1.0331 -0.6566 7 1 4.1098 -0.0371 -0.8355 8 7 5.2363 1.7783 -0.9351 9 6 6.1521 1.2733 -1.7853 10 8 5.9580 0.2019 -2.3194 11 6 7.4179 2.0396 -2.0714 12 8 8.2220 1.3031 -2.9951 13 6 9.4067 1.8591 -3.3613 14 6 10.2399 1.1960 -4.2502 15 7 9.8394 -0.1179 -4.8015 16 8 10.5716 -0.6999 -5.5816 17 8 8.7779 -0.6175 -4.4742 18 6 11.4420 1.7653 -4.6245 19 6 11.8191 2.9901 -4.1059 20 6 13.1336 3.6059 -4.5109 21 8 14.2025 2.7308 -4.1448 22 14 13.3461 5.2417 -3.6450 23 6 10.9925 3.6509 -3.2159 24 6 9.7876 3.0882 -2.8423 25 6 2.7534 1.6490 -1.3018 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5137 0.8900 28 1 -0.3634 0.5139 -0.8900 29 1 3.5170 0.5957 1.4566 30 1 3.6311 2.3670 1.0686 31 1 5.3917 2.6351 -0.5077 32 1 7.1663 3.0093 -2.5009 33 1 7.9717 2.1856 -1.1440 34 1 12.0894 1.2512 -5.3194 35 1 13.1449 3.7616 -5.5897 36 1 15.0802 3.0639 -4.3762 37 1 13.3326 5.0428 -2.1734 38 1 14.6240 5.8740 -4.0603 39 1 11.2896 4.6075 -2.8119 40 1 9.1425 3.6046 -2.1468 41 1 2.8389 2.7198 -1.4862 42 1 2.3926 1.0965 -2.1693 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_4549638.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:22 Heat of formation + Delta-G solvation = -73.792044 kcal Electronic energy + Delta-G solvation = -28943.102001 eV Core-core repulsion = 24474.866507 eV Total energy + Delta-G solvation = -4468.235494 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 339.129 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -42.96546 -41.74519 -41.16131 -40.08983 -39.21432 -37.68739 -37.14991 -37.04673 -34.30209 -33.46697 -32.43861 -30.10340 -27.72089 -27.54182 -26.86948 -26.70602 -25.35089 -23.91246 -22.66287 -21.77594 -20.99707 -20.35915 -19.42081 -19.07505 -18.79838 -18.44061 -18.26798 -18.01517 -17.61253 -17.37526 -16.96216 -16.60581 -16.26894 -16.17415 -16.04994 -15.64675 -15.52842 -15.18263 -14.71343 -14.48936 -14.27316 -14.03751 -13.82597 -13.60480 -13.44301 -13.24873 -13.16289 -12.86161 -12.50793 -12.46075 -12.14935 -12.06967 -12.05575 -11.76188 -11.68405 -11.51891 -10.90331 -10.87802 -10.79585 -10.59070 -10.14431 -9.83792 -5.23628 -1.07132 -0.32005 0.43605 0.58632 0.99869 1.13915 1.35048 1.44815 1.71385 1.96825 2.26246 2.57136 2.89666 3.08642 3.12952 3.34671 3.44084 3.46604 3.49367 3.58590 3.59811 3.64564 3.76503 3.77254 3.96558 4.07277 4.19897 4.21835 4.32407 4.38038 4.40832 4.47829 4.48421 4.69137 4.73325 4.75626 4.84410 4.96089 4.96539 4.98549 5.35946 5.50073 5.76024 6.15429 6.19715 6.30240 6.99353 7.08114 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.030 3.970 2 O -0.368 6.368 3 C 0.065 3.935 4 H 0.082 0.918 5 C -0.148 4.148 6 C 0.132 3.868 7 H 0.123 0.877 8 N -0.719 5.719 9 C 0.513 3.487 10 O -0.494 6.494 11 C 0.030 3.970 12 O -0.253 6.253 13 C 0.200 3.800 14 C -0.076 4.076 15 N 0.029 4.971 16 O -0.178 6.178 17 O -0.118 6.118 18 C 0.010 3.990 19 C -0.110 4.110 20 C -0.074 4.074 21 O -0.535 6.535 22 Si 0.684 3.316 23 C -0.022 4.022 24 C -0.209 4.209 25 C -0.172 4.172 26 H 0.089 0.911 27 H 0.044 0.956 28 H 0.044 0.956 29 H 0.087 0.913 30 H 0.098 0.902 31 H 0.401 0.599 32 H 0.102 0.898 33 H 0.102 0.898 34 H 0.163 0.837 35 H 0.085 0.915 36 H 0.385 0.615 37 H -0.251 1.251 38 H -0.255 1.255 39 H 0.149 0.851 40 H 0.157 0.843 41 H 0.093 0.907 42 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.722 12.331 4.071 13.099 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.286 6.286 3 C 0.006 3.994 4 H 0.100 0.900 5 C -0.186 4.186 6 C 0.028 3.972 7 H 0.141 0.859 8 N -0.373 5.373 9 C 0.297 3.703 10 O -0.366 6.366 11 C -0.048 4.048 12 O -0.163 6.163 13 C 0.150 3.850 14 C -0.160 4.160 15 N 0.549 4.451 16 O -0.387 6.387 17 O -0.342 6.342 18 C -0.009 4.009 19 C -0.112 4.112 20 C -0.183 4.183 21 O -0.343 6.343 22 Si 0.584 3.416 23 C -0.040 4.040 24 C -0.228 4.228 25 C -0.211 4.211 26 H 0.108 0.892 27 H 0.063 0.937 28 H 0.063 0.937 29 H 0.105 0.895 30 H 0.116 0.884 31 H 0.236 0.764 32 H 0.120 0.880 33 H 0.119 0.881 34 H 0.180 0.820 35 H 0.103 0.897 36 H 0.234 0.766 37 H -0.176 1.176 38 H -0.179 1.179 39 H 0.167 0.833 40 H 0.175 0.825 41 H 0.112 0.888 42 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -1.599 11.886 4.597 12.844 hybrid contribution 0.885 -0.030 -0.042 0.887 sum -0.714 11.856 4.554 12.721 Atomic orbital electron populations 1.22863 0.80295 1.03290 1.00175 1.87914 1.20242 1.25972 1.94517 1.22841 0.94228 0.85904 0.96421 0.89982 1.23635 0.94417 1.03295 0.97236 1.22577 0.81140 0.98269 0.95195 0.85874 1.45816 1.20197 1.24300 1.46980 1.19866 0.83986 0.86488 0.79973 1.90872 1.76894 1.20707 1.48081 1.22753 0.91750 0.95924 0.94406 1.86509 1.26607 1.44518 1.58617 1.18682 0.85023 0.90955 0.90354 1.20553 0.99265 0.89048 1.07142 1.43324 1.00569 1.01717 0.99482 1.94547 1.51154 1.62476 1.30484 1.94701 1.09736 1.67755 1.61963 1.20798 0.91353 0.93274 0.95431 1.19138 0.96370 0.95434 1.00218 1.24771 0.85875 1.03037 1.04634 1.86587 1.17266 1.45783 1.84663 0.95265 0.88104 0.77618 0.80604 1.21188 0.92177 0.98715 0.91913 1.21235 1.00141 0.95353 1.06051 1.24003 0.96385 1.01846 0.98885 0.89202 0.93737 0.93748 0.89476 0.88357 0.76441 0.87973 0.88066 0.81953 0.89734 0.76578 1.17562 1.17944 0.83347 0.82501 0.88833 0.89976 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.85 101.05 1.10 1.06 16 2 O -0.37 -0.50 10.63 -35.23 -0.37 -0.88 16 3 C 0.07 -0.08 4.37 -25.92 -0.11 -0.19 16 4 H 0.08 -0.23 7.87 -51.93 -0.41 -0.64 16 5 C -0.15 0.34 7.66 -25.92 -0.20 0.14 16 6 C 0.13 -0.06 4.17 -67.11 -0.28 -0.34 16 7 H 0.12 0.34 7.46 -51.93 -0.39 -0.05 16 8 N -0.72 1.54 5.35 -53.01 -0.28 1.26 16 9 C 0.51 0.57 7.91 -10.98 -0.09 0.49 16 10 O -0.49 -3.45 16.10 -14.35 -0.23 -3.69 16 11 C 0.03 -0.06 5.22 36.01 0.19 0.12 16 12 O -0.25 -0.70 7.68 -49.79 -0.38 -1.08 16 13 C 0.20 0.27 6.67 -39.22 -0.26 0.01 16 14 C -0.08 -0.27 6.87 -79.81 -0.55 -0.82 16 15 N 0.03 0.21 4.45 34.03 0.15 0.36 16 16 O -0.18 -1.39 18.45 -29.46 -0.54 -1.94 16 17 O -0.12 -1.09 17.24 -36.49 -0.63 -1.72 16 18 C 0.01 0.02 9.11 -39.60 -0.36 -0.35 16 19 C -0.11 0.10 5.42 -104.60 -0.57 -0.47 16 20 C -0.07 0.17 2.81 36.01 0.10 0.27 16 21 O -0.53 0.30 12.74 -35.23 -0.45 -0.15 16 22 Si 0.68 -2.46 29.78 -169.99 -5.06 -7.52 16 23 C -0.02 0.06 8.66 -39.60 -0.34 -0.28 16 24 C -0.21 0.55 9.04 -39.43 -0.36 0.20 16 25 C -0.17 0.19 7.71 -25.91 -0.20 -0.01 16 26 H 0.09 -0.14 8.14 -51.93 -0.42 -0.57 16 27 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 29 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 30 H 0.10 -0.47 8.12 -51.93 -0.42 -0.89 16 31 H 0.40 -2.41 8.73 -40.82 -0.36 -2.77 16 32 H 0.10 -0.58 7.66 -51.93 -0.40 -0.98 16 33 H 0.10 -0.54 7.66 -51.93 -0.40 -0.94 16 34 H 0.16 0.21 7.61 -52.49 -0.40 -0.19 16 35 H 0.08 -0.33 7.96 -51.93 -0.41 -0.75 16 36 H 0.39 -1.72 8.74 45.56 0.40 -1.32 16 37 H -0.25 0.20 7.11 56.52 0.40 0.61 16 38 H -0.25 0.28 7.11 56.52 0.40 0.69 16 39 H 0.15 -0.85 4.87 -52.48 -0.26 -1.10 16 40 H 0.16 -1.03 6.30 -52.49 -0.33 -1.36 16 41 H 0.09 -0.27 8.14 -51.93 -0.42 -0.69 16 42 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 LS Contribution 364.98 15.07 5.50 5.50 Total: 0.00 -13.52 364.98 -9.34 -22.86 By element: Atomic # 1 Polarization: -7.77 SS G_CDS: -5.10 Total: -12.87 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -1.93 Total: -0.15 kcal Atomic # 7 Polarization: 1.75 SS G_CDS: -0.13 Total: 1.62 kcal Atomic # 8 Polarization: -6.83 SS G_CDS: -2.61 Total: -9.44 kcal Atomic # 14 Polarization: -2.46 SS G_CDS: -5.06 Total: -7.52 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -13.52 -9.34 -22.86 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_4549638.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.931 kcal (2) G-P(sol) polarization free energy of solvation -13.520 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.452 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.340 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.861 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds