Wall clock time and date at job start Tue Mar 9 2021 12:59:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42901 * 114.00070 * 2 1 4 4 H 1.09001 * 112.84837 * 341.19387 * 3 2 1 5 5 C 1.53784 * 113.69077 * 112.46166 * 3 2 1 6 6 C 1.53785 * 87.08125 * 139.99340 * 5 3 2 7 7 H 1.08996 * 113.69317 * 220.01438 * 6 5 3 8 8 N 1.46498 * 113.61226 * 89.11438 * 6 5 3 9 9 C 1.34775 * 119.99714 * 107.50658 * 8 6 5 10 10 O 1.21282 * 120.00005 * 359.97438 * 9 8 6 11 11 C 1.50700 * 119.99929 * 180.02562 * 9 8 6 12 12 O 1.42905 * 109.47219 * 180.02562 * 11 9 8 13 13 C 1.35904 * 117.00216 * 180.02562 * 12 11 9 14 14 C 1.38710 * 120.05675 * 179.97438 * 13 12 11 15 15 C 1.38159 * 119.94279 * 179.97438 * 14 13 12 16 16 C 1.50703 * 119.97168 * 179.97438 * 15 14 13 17 17 O 1.42898 * 109.47171 * 65.00069 * 16 15 14 18 18 Si 1.86303 * 109.47044 * 184.99812 * 16 15 14 19 19 C 1.38245 * 120.05607 * 0.27343 * 15 14 13 20 20 C 1.38289 * 120.11287 * 359.44887 * 19 15 14 21 21 C 1.38124 * 120.05188 * 0.55082 * 20 19 15 22 22 C 1.53785 * 87.08179 * 334.56735 * 6 5 3 23 23 H 1.08991 * 109.47224 * 300.00034 * 1 2 3 24 24 H 1.08999 * 109.46755 * 60.00194 * 1 2 3 25 25 H 1.09001 * 109.47077 * 179.97438 * 1 2 3 26 26 H 1.08995 * 113.61150 * 25.44837 * 5 3 2 27 27 H 1.08992 * 113.61522 * 254.53981 * 5 3 2 28 28 H 0.97001 * 120.00304 * 287.50583 * 8 6 5 29 29 H 1.09001 * 109.47399 * 59.99695 * 11 9 8 30 30 H 1.09004 * 109.46949 * 299.99302 * 11 9 8 31 31 H 1.08001 * 120.02432 * 359.97438 * 14 13 12 32 32 H 1.09002 * 109.47152 * 304.99853 * 16 15 14 33 33 H 0.96701 * 113.99881 * 180.02562 * 17 16 15 34 34 H 1.48493 * 110.00286 * 299.99847 * 18 16 15 35 35 H 1.48505 * 109.99793 * 61.32243 * 18 16 15 36 36 H 1.08003 * 119.94486 * 179.71028 * 19 15 14 37 37 H 1.07998 * 119.97112 * 180.25365 * 20 19 15 38 38 H 1.07996 * 120.02628 * 179.69825 * 21 20 19 39 39 H 1.09005 * 113.61416 * 139.97870 * 22 6 5 40 40 H 1.08997 * 113.61455 * 270.88531 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3137 2.0789 -0.3238 5 6 2.7531 1.6511 1.3014 6 6 3.8220 2.3199 0.4211 7 1 4.8425 2.1438 0.7612 8 7 3.5516 3.7322 0.1406 9 6 4.2911 4.6905 0.7332 10 8 5.1801 4.3837 1.4990 11 6 4.0126 6.1432 0.4451 12 8 4.9223 6.9588 1.1863 13 6 4.8048 8.3047 1.0392 14 6 5.6552 9.1559 1.7295 15 6 5.5340 10.5238 1.5778 16 6 6.4571 11.4491 2.3280 17 8 7.7973 11.2592 1.8700 18 14 5.9432 13.2149 2.0296 19 6 4.5627 11.0445 0.7433 20 6 3.7174 10.1979 0.0495 21 6 3.8345 8.8297 0.1978 22 6 3.3756 1.3719 -0.7045 23 1 -0.3633 0.5138 0.8899 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 3.1168 0.7772 1.8417 27 1 2.2132 2.3503 1.9398 28 1 2.8403 3.9775 -0.4716 29 1 2.9897 6.3819 0.7367 30 1 4.1404 6.3333 -0.6206 31 1 6.4113 8.7496 2.3850 32 1 6.4031 11.2302 3.3944 33 1 8.4472 11.8236 2.3107 34 1 6.0126 13.5259 0.5793 35 1 4.5625 13.4336 2.5307 36 1 4.4665 12.1142 0.6296 37 1 2.9621 10.6071 -0.6050 38 1 3.1710 8.1691 -0.3405 39 1 3.3382 1.8458 -1.6854 40 1 3.9095 0.4217 -0.7124 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_4860298.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:32 Heat of formation + Delta-G solvation = -80.627120 kcal Electronic energy + Delta-G solvation = -22740.107088 eV Core-core repulsion = 19102.591638 eV Total energy + Delta-G solvation = -3637.515450 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -41.70905 -41.11840 -39.87441 -38.80738 -37.40155 -37.19759 -34.19650 -32.63572 -31.71115 -29.46585 -27.84843 -26.88753 -26.79085 -25.11934 -23.72677 -22.80574 -21.65025 -20.73417 -19.25715 -18.45184 -18.40643 -17.89221 -17.53656 -17.48231 -16.95564 -16.82971 -16.47700 -16.18621 -15.86006 -15.48137 -15.39648 -14.83894 -14.58056 -14.28366 -14.22426 -13.87666 -13.77795 -13.67004 -13.52869 -13.41418 -13.22578 -12.39229 -12.30099 -12.21933 -12.10778 -12.07457 -11.81306 -11.65076 -10.97313 -10.56577 -10.38636 -10.25402 -9.93536 -9.31184 -4.97967 0.15516 0.35226 1.21983 1.37717 1.40063 1.63268 1.95743 2.45727 2.59385 2.74036 3.29703 3.35427 3.38939 3.42279 3.67159 3.70343 3.75974 3.76572 3.84384 3.85157 3.94216 4.15541 4.20540 4.25571 4.34902 4.36556 4.46691 4.57025 4.63595 4.66865 4.68628 4.77720 4.84336 4.90145 4.92512 5.16876 5.28519 5.34093 5.40013 5.58717 6.14127 6.16420 6.31291 6.61770 7.01160 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.375 6.375 3 C 0.060 3.940 4 H 0.086 0.914 5 C -0.166 4.166 6 C 0.122 3.878 7 H 0.114 0.886 8 N -0.713 5.713 9 C 0.519 3.481 10 O -0.507 6.507 11 C 0.041 3.959 12 O -0.287 6.287 13 C 0.131 3.869 14 C -0.117 4.117 15 C -0.034 4.034 16 C -0.075 4.075 17 O -0.544 6.544 18 Si 0.689 3.311 19 C -0.160 4.160 20 C -0.071 4.071 21 C -0.206 4.206 22 C -0.142 4.142 23 H 0.042 0.958 24 H 0.042 0.958 25 H 0.088 0.912 26 H 0.103 0.897 27 H 0.074 0.926 28 H 0.402 0.598 29 H 0.095 0.905 30 H 0.096 0.904 31 H 0.138 0.862 32 H 0.077 0.923 33 H 0.383 0.617 34 H -0.250 1.250 35 H -0.255 1.255 36 H 0.121 0.879 37 H 0.131 0.869 38 H 0.132 0.868 39 H 0.080 0.920 40 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.858 2.555 -1.450 4.849 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.294 6.294 3 C 0.002 3.998 4 H 0.104 0.896 5 C -0.205 4.205 6 C 0.017 3.983 7 H 0.132 0.868 8 N -0.367 5.367 9 C 0.304 3.696 10 O -0.380 6.380 11 C -0.038 4.038 12 O -0.199 6.199 13 C 0.086 3.914 14 C -0.136 4.136 15 C -0.035 4.035 16 C -0.185 4.185 17 O -0.350 6.350 18 Si 0.590 3.410 19 C -0.178 4.178 20 C -0.089 4.089 21 C -0.225 4.225 22 C -0.180 4.180 23 H 0.061 0.939 24 H 0.061 0.939 25 H 0.106 0.894 26 H 0.121 0.879 27 H 0.093 0.907 28 H 0.236 0.764 29 H 0.113 0.887 30 H 0.114 0.886 31 H 0.156 0.844 32 H 0.095 0.905 33 H 0.231 0.769 34 H -0.175 1.175 35 H -0.179 1.179 36 H 0.138 0.862 37 H 0.149 0.851 38 H 0.149 0.851 39 H 0.098 0.902 40 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -3.807 2.155 -1.537 4.637 hybrid contribution -1.077 -0.242 -0.508 1.215 sum -4.884 1.913 -2.044 5.630 Atomic orbital electron populations 1.22824 0.80834 1.03151 0.99981 1.87964 1.19922 1.26947 1.94528 1.23832 0.93810 0.85603 0.96599 0.89620 1.23992 0.97652 1.01392 0.97487 1.21664 1.00762 0.79017 0.96906 0.86781 1.45502 1.37348 1.05458 1.48347 1.20027 0.82080 0.86673 0.80838 1.90797 1.30357 1.82849 1.33964 1.22458 0.94710 0.88844 0.97813 1.86173 1.54938 1.13997 1.64816 1.19004 0.94925 0.82219 0.95286 1.20257 1.00027 0.91181 1.02094 1.19133 0.95066 0.92952 0.96310 1.24745 0.85586 1.08709 0.99488 1.86506 1.15519 1.66883 1.66106 0.95278 0.83838 0.78988 0.82919 1.20827 0.98256 0.99183 0.99523 1.20854 0.97974 0.92474 0.97633 1.21271 1.01357 0.96660 1.03197 1.23630 0.95781 1.00512 0.98049 0.93920 0.93927 0.89398 0.87865 0.90733 0.76351 0.88689 0.88621 0.84395 0.90488 0.76886 1.17505 1.17942 0.86171 0.85090 0.85069 0.90161 0.87333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 2 O -0.38 -0.41 10.72 -35.23 -0.38 -0.79 16 3 C 0.06 -0.07 4.18 -25.91 -0.11 -0.18 16 4 H 0.09 -0.25 7.87 -51.93 -0.41 -0.66 16 5 C -0.17 0.08 7.71 -25.92 -0.20 -0.12 16 6 C 0.12 -0.07 4.32 -67.11 -0.29 -0.36 16 7 H 0.11 0.14 7.46 -51.93 -0.39 -0.24 16 8 N -0.71 1.13 5.26 -53.02 -0.28 0.85 16 9 C 0.52 0.83 7.91 -10.99 -0.09 0.74 16 10 O -0.51 -3.40 16.10 -14.35 -0.23 -3.63 16 11 C 0.04 -0.02 5.22 36.01 0.19 0.17 16 12 O -0.29 -1.06 9.67 -39.35 -0.38 -1.44 16 13 C 0.13 0.41 6.69 -39.22 -0.26 0.15 16 14 C -0.12 -0.44 9.62 -39.44 -0.38 -0.82 16 15 C -0.03 -0.11 5.38 -104.65 -0.56 -0.67 16 16 C -0.07 -0.04 2.79 36.01 0.10 0.06 16 17 O -0.54 -0.51 12.81 -35.23 -0.45 -0.97 16 18 Si 0.69 -0.60 29.84 -169.99 -5.07 -5.67 16 19 C -0.16 -0.40 8.67 -39.56 -0.34 -0.75 16 20 C -0.07 -0.08 10.04 -39.60 -0.40 -0.48 16 21 C -0.21 -0.20 9.04 -39.43 -0.36 -0.55 16 22 C -0.14 0.24 7.66 -25.91 -0.20 0.04 16 23 H 0.04 -0.08 8.14 -51.93 -0.42 -0.50 16 24 H 0.04 -0.10 8.14 -51.93 -0.42 -0.52 16 25 H 0.09 -0.16 8.14 -51.93 -0.42 -0.59 16 26 H 0.10 0.01 8.14 -51.93 -0.42 -0.41 16 27 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 28 H 0.40 -1.96 8.70 -40.82 -0.36 -2.31 16 29 H 0.10 -0.31 7.66 -51.93 -0.40 -0.71 16 30 H 0.10 -0.29 7.66 -51.93 -0.40 -0.69 16 31 H 0.14 0.51 8.06 -52.49 -0.42 0.09 16 32 H 0.08 -0.08 7.96 -51.93 -0.41 -0.49 16 33 H 0.38 -1.64 8.74 45.56 0.40 -1.24 16 34 H -0.25 -0.54 7.05 56.52 0.40 -0.14 16 35 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 36 H 0.12 0.22 4.86 -52.48 -0.26 -0.04 16 37 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 38 H 0.13 -0.28 6.30 -52.49 -0.33 -0.62 16 39 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 40 H 0.11 -0.13 8.14 -51.93 -0.42 -0.55 16 LS Contribution 338.98 15.07 5.11 5.11 Total: 0.00 -10.50 338.98 -9.04 -19.54 By element: Atomic # 1 Polarization: -5.74 SS G_CDS: -5.55 Total: -11.29 kcal Atomic # 6 Polarization: 0.09 SS G_CDS: -1.80 Total: -1.71 kcal Atomic # 7 Polarization: 1.13 SS G_CDS: -0.28 Total: 0.85 kcal Atomic # 8 Polarization: -5.38 SS G_CDS: -1.44 Total: -6.82 kcal Atomic # 14 Polarization: -0.60 SS G_CDS: -5.07 Total: -5.67 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -10.50 -9.04 -19.54 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_4860298.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.086 kcal (2) G-P(sol) polarization free energy of solvation -10.502 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.589 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.038 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.627 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds