Wall clock time and date at job start Tue Mar 9 2021 12:59:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35895 * 117.00236 * 2 1 4 4 C 1.38611 * 120.03066 * 179.97438 * 3 2 1 5 5 C 1.38654 * 119.89125 * 180.02562 * 4 3 2 6 6 O 1.35904 * 120.02381 * 179.97438 * 5 4 3 7 7 C 1.42892 * 117.00162 * 0.02562 * 6 5 4 8 8 C 1.50704 * 109.47020 * 179.97438 * 7 6 5 9 9 O 1.21282 * 119.99843 * 0.02562 * 8 7 6 10 10 N 1.34777 * 120.00246 * 179.97438 * 8 7 6 11 11 C 1.46491 * 120.00383 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.85029 * 334.67425 * 11 10 8 13 13 C 1.53787 * 113.61303 * 105.86595 * 11 10 8 14 14 C 1.54049 * 86.98162 * 89.16524 * 13 11 10 15 15 H 1.09003 * 113.61446 * 270.87852 * 14 13 11 16 16 O 1.42901 * 113.61684 * 139.98002 * 14 13 11 17 17 C 1.42902 * 114.00191 * 112.50557 * 16 14 13 18 18 C 1.53779 * 87.07989 * 25.43390 * 14 13 11 19 19 C 1.38750 * 119.94554 * 0.02562 * 5 4 3 20 20 C 1.50705 * 119.97197 * 179.97438 * 19 5 4 21 21 O 1.42894 * 109.47171 * 285.00363 * 20 19 5 22 22 Si 1.86298 * 109.46780 * 164.99803 * 20 19 5 23 23 C 1.38191 * 120.05476 * 0.27295 * 19 5 4 24 24 C 1.38163 * 120.11105 * 359.45155 * 23 19 5 25 25 H 1.09000 * 109.47183 * 60.00112 * 1 2 3 26 26 H 1.09006 * 109.46838 * 179.97438 * 1 2 3 27 27 H 1.08999 * 109.47224 * 299.99594 * 1 2 3 28 28 H 1.08006 * 120.05148 * 0.04921 * 4 3 2 29 29 H 1.09000 * 109.47598 * 299.99881 * 7 6 5 30 30 H 1.08998 * 109.47115 * 60.00615 * 7 6 5 31 31 H 0.97009 * 119.99433 * 0.02562 * 10 8 7 32 32 H 1.08997 * 113.61265 * 203.66637 * 13 11 10 33 33 H 1.08994 * 113.61457 * 334.56766 * 13 11 10 34 34 H 1.09000 * 109.46775 * 300.00007 * 17 16 14 35 35 H 1.09002 * 109.47103 * 59.99385 * 17 16 14 36 36 H 1.09000 * 109.47382 * 180.02562 * 17 16 14 37 37 H 1.09011 * 113.61185 * 220.02442 * 18 14 13 38 38 H 1.08996 * 113.61989 * 89.12052 * 18 14 13 39 39 H 1.09004 * 109.46779 * 45.00686 * 20 19 5 40 40 H 0.96709 * 113.99337 * 180.02562 * 21 20 19 41 41 H 1.48506 * 109.99834 * 60.00830 * 22 20 19 42 42 H 1.48502 * 110.00011 * 181.32094 * 22 20 19 43 43 H 1.08006 * 119.94970 * 179.70363 * 23 19 5 44 44 H 1.07992 * 119.97629 * 180.25168 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4302 1.2840 0.0005 5 6 4.0567 2.5210 0.0011 6 8 5.4137 2.5959 0.0021 7 6 6.1316 1.3604 0.0021 8 6 7.6125 1.6400 0.0027 9 8 8.0135 2.7847 0.0036 10 7 8.4913 0.6182 0.0032 11 6 9.9308 0.8899 0.0044 12 1 10.1786 1.8607 -0.4250 13 6 10.6065 0.6255 1.3603 14 6 10.8259 -0.8206 0.8769 15 1 9.9996 -1.4906 1.1147 16 8 12.0995 -1.3582 1.2389 17 6 12.0322 -2.4222 2.1904 18 6 10.7764 -0.2656 -0.5563 19 6 3.2971 3.6821 0.0016 20 6 3.9775 5.0268 0.0028 21 8 4.5032 5.2935 1.3044 22 14 2.7440 6.3471 -0.4514 23 6 1.9173 3.6065 0.0073 24 6 1.2906 2.3752 0.0010 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 4.0197 0.3790 0.0002 29 1 5.8693 0.7876 0.8916 30 1 5.8707 0.7886 -0.8884 31 1 8.1705 -0.2973 0.0029 32 1 11.5320 1.1833 1.5031 33 1 9.9277 0.7054 2.2094 34 1 11.5633 -2.0617 3.1060 35 1 11.4426 -3.2413 1.7785 36 1 13.0392 -2.7750 2.4130 37 1 10.2346 -0.9048 -1.2536 38 1 11.7482 0.0490 -0.9366 39 1 4.7901 5.0234 -0.7237 40 1 4.9557 6.1449 1.3789 41 1 1.6309 6.3620 0.5315 42 1 3.4097 7.6741 -0.4849 43 1 1.3277 4.5114 0.0126 44 1 0.2121 2.3187 0.0014 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_12343576_4974312.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:36 Heat of formation + Delta-G solvation = -116.678768 kcal Electronic energy + Delta-G solvation = -27353.542117 eV Core-core repulsion = 23240.243539 eV Total energy + Delta-G solvation = -4113.298578 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -41.88303 -41.32905 -40.24832 -39.54563 -38.27060 -37.33773 -37.07195 -34.21404 -32.40213 -31.44525 -29.57026 -28.36943 -27.72403 -26.79928 -26.07672 -25.15172 -23.72748 -22.40602 -21.96253 -20.70809 -19.89385 -18.64136 -18.56741 -18.07221 -17.62391 -17.45825 -17.31092 -16.88223 -16.74360 -16.65832 -16.55057 -16.10315 -15.63034 -15.60925 -15.49782 -15.21525 -14.77999 -14.18246 -14.02798 -13.80610 -13.76245 -13.61123 -13.49397 -13.38103 -13.34142 -13.20629 -12.51605 -12.42512 -12.20409 -12.00911 -11.98176 -11.75891 -11.61377 -11.57375 -11.09978 -10.49636 -10.41146 -10.24816 -9.71231 -9.11397 -4.94490 0.18407 0.29333 1.30270 1.35104 1.36772 1.58664 1.90992 2.23089 2.51012 2.53724 2.85436 3.39283 3.44524 3.46885 3.51221 3.70995 3.77500 3.87039 3.91710 3.94854 4.03024 4.05104 4.18246 4.29965 4.35164 4.37421 4.42626 4.45338 4.47079 4.53412 4.60740 4.71107 4.72387 4.79095 4.82986 4.88877 4.91506 4.96599 4.99787 5.21833 5.28918 5.38635 5.45358 6.09766 6.25662 6.32976 6.38786 6.59122 7.04400 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.328 6.328 3 C 0.165 3.835 4 C -0.250 4.250 5 C 0.176 3.824 6 O -0.303 6.303 7 C 0.035 3.965 8 C 0.518 3.482 9 O -0.565 6.565 10 N -0.693 5.693 11 C 0.121 3.879 12 H 0.090 0.910 13 C -0.170 4.170 14 C 0.062 3.938 15 H 0.109 0.891 16 O -0.400 6.400 17 C 0.023 3.977 18 C -0.131 4.131 19 C -0.161 4.161 20 C -0.081 4.081 21 O -0.557 6.557 22 Si 0.779 3.221 23 C -0.042 4.042 24 C -0.238 4.238 25 H 0.071 0.929 26 H 0.118 0.882 27 H 0.065 0.935 28 H 0.158 0.842 29 H 0.120 0.880 30 H 0.128 0.872 31 H 0.421 0.579 32 H 0.090 0.910 33 H 0.069 0.931 34 H 0.045 0.955 35 H 0.056 0.944 36 H 0.090 0.910 37 H 0.100 0.900 38 H 0.102 0.898 39 H 0.067 0.933 40 H 0.388 0.612 41 H -0.280 1.280 42 H -0.291 1.291 43 H 0.151 0.849 44 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.474 -6.907 -2.664 8.650 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.241 6.241 3 C 0.118 3.882 4 C -0.270 4.270 5 C 0.130 3.870 6 O -0.215 6.215 7 C -0.043 4.043 8 C 0.305 3.695 9 O -0.443 6.443 10 N -0.347 5.347 11 C 0.015 3.985 12 H 0.108 0.892 13 C -0.209 4.209 14 C 0.004 3.996 15 H 0.127 0.873 16 O -0.319 6.319 17 C -0.073 4.073 18 C -0.169 4.169 19 C -0.162 4.162 20 C -0.188 4.188 21 O -0.367 6.367 22 Si 0.683 3.317 23 C -0.060 4.060 24 C -0.256 4.256 25 H 0.090 0.910 26 H 0.136 0.864 27 H 0.084 0.916 28 H 0.175 0.825 29 H 0.137 0.863 30 H 0.146 0.854 31 H 0.259 0.741 32 H 0.109 0.891 33 H 0.088 0.912 34 H 0.064 0.936 35 H 0.075 0.925 36 H 0.108 0.892 37 H 0.118 0.882 38 H 0.120 0.880 39 H 0.085 0.915 40 H 0.237 0.763 41 H -0.207 1.207 42 H -0.218 1.218 43 H 0.168 0.832 44 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -4.459 -5.929 -2.380 7.791 hybrid contribution 0.681 -0.034 1.238 1.413 sum -3.778 -5.963 -1.143 7.151 Atomic orbital electron populations 1.23409 0.76017 1.05741 1.02671 1.86050 1.23737 1.26389 1.87925 1.18850 0.91690 0.84926 0.92692 1.20554 0.93387 0.97378 1.15641 1.18547 0.81750 0.93142 0.93552 1.86187 1.15407 1.31711 1.88186 1.22742 0.88191 0.86534 1.06845 1.20457 0.88450 0.85112 0.75505 1.90766 1.80686 1.23191 1.49659 1.45333 1.04974 1.09643 1.74765 1.21562 0.79349 1.00109 0.97488 0.89197 1.24023 1.01226 0.97987 0.97662 1.23996 0.86569 0.93343 0.95668 0.87319 1.87928 1.29396 1.52476 1.62133 1.22955 1.03643 0.89145 0.91540 1.23538 1.00861 0.96045 0.96410 1.18753 0.93141 0.92366 1.11926 1.24982 1.04743 1.01830 0.87286 1.86557 1.76417 1.42809 1.30867 0.94166 0.76619 0.73579 0.87374 1.20903 0.92080 0.98824 0.94165 1.21384 1.01663 0.91142 1.11435 0.91027 0.86424 0.91649 0.82492 0.86281 0.85394 0.74055 0.89104 0.91200 0.93587 0.92546 0.89171 0.88183 0.87976 0.91457 0.76315 1.20732 1.21838 0.83177 0.82418 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.40 10.49 -92.37 -0.97 -1.37 16 3 C 0.16 0.46 6.68 22.49 0.15 0.61 16 4 C -0.25 -0.75 8.97 22.46 0.20 -0.55 16 5 C 0.18 1.22 6.66 22.49 0.15 1.37 16 6 O -0.30 -2.61 8.99 -73.43 -0.66 -3.27 16 7 C 0.03 -0.02 5.22 71.24 0.37 0.35 16 8 C 0.52 2.20 7.91 87.66 0.69 2.89 16 9 O -0.57 -8.85 16.12 16.00 0.26 -8.59 16 10 N -0.69 2.08 5.26 -440.04 -2.32 -0.24 16 11 C 0.12 -0.02 4.29 45.52 0.20 0.18 16 12 H 0.09 0.44 7.50 -2.39 -0.02 0.42 16 13 C -0.17 -0.09 7.73 31.21 0.24 0.15 16 14 C 0.06 -0.15 4.20 31.21 0.13 -0.02 16 15 H 0.11 -0.77 7.87 -2.39 -0.02 -0.79 16 16 O -0.40 -0.95 10.72 -148.98 -1.60 -2.54 16 17 C 0.02 -0.06 10.85 113.37 1.23 1.17 16 18 C -0.13 0.47 7.65 31.12 0.24 0.71 16 19 C -0.16 -1.13 5.30 -19.75 -0.10 -1.23 16 20 C -0.08 -0.54 2.36 71.24 0.17 -0.37 16 21 O -0.56 -5.74 12.86 -148.98 -1.92 -7.66 16 22 Si 0.78 0.96 30.21 68.60 2.07 3.04 16 23 C -0.04 -0.12 8.65 22.24 0.19 0.07 16 24 C -0.24 -0.23 9.04 22.39 0.20 -0.03 16 25 H 0.07 -0.58 7.66 -2.39 -0.02 -0.59 16 26 H 0.12 -1.07 8.14 -2.38 -0.02 -1.09 16 27 H 0.06 -0.46 7.66 -2.39 -0.02 -0.48 16 28 H 0.16 -0.36 6.30 -2.91 -0.02 -0.38 16 29 H 0.12 -0.67 7.66 -2.39 -0.02 -0.69 16 30 H 0.13 -0.92 7.66 -2.39 -0.02 -0.94 16 31 H 0.42 -4.54 8.70 -92.70 -0.81 -5.35 16 32 H 0.09 0.25 8.14 -2.39 -0.02 0.23 16 33 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 34 H 0.05 -0.16 8.14 -2.39 -0.02 -0.18 16 35 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 36 H 0.09 -0.32 8.14 -2.39 -0.02 -0.34 16 37 H 0.10 -0.73 8.14 -2.38 -0.02 -0.75 16 38 H 0.10 -0.20 8.14 -2.39 -0.02 -0.22 16 39 H 0.07 0.49 7.82 -2.38 -0.02 0.48 16 40 H 0.39 1.17 8.74 -74.05 -0.65 0.53 16 41 H -0.28 -1.45 6.74 99.48 0.67 -0.78 16 42 H -0.29 -1.72 7.11 99.48 0.71 -1.01 16 43 H 0.15 -0.09 4.89 -2.91 -0.01 -0.10 16 44 H 0.16 -0.71 6.29 -2.91 -0.02 -0.73 16 Total: 0.00 -26.99 367.73 -0.37 -27.35 By element: Atomic # 1 Polarization: -12.62 SS G_CDS: -0.41 Total: -13.03 kcal Atomic # 6 Polarization: 1.14 SS G_CDS: 5.17 Total: 6.31 kcal Atomic # 7 Polarization: 2.08 SS G_CDS: -2.32 Total: -0.24 kcal Atomic # 8 Polarization: -18.55 SS G_CDS: -4.88 Total: -23.43 kcal Atomic # 14 Polarization: 0.96 SS G_CDS: 2.07 Total: 3.04 kcal Total: -26.99 -0.37 -27.35 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_4974312.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.324 kcal (2) G-P(sol) polarization free energy of solvation -26.988 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.312 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.366 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.355 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.679 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds