Wall clock time and date at job start Tue Mar 9 2021 12:59:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35991 * 116.99952 * 2 1 4 4 C 1.39160 * 120.07371 * 180.02562 * 3 2 1 5 5 O 1.35991 * 120.07265 * 0.02562 * 4 3 2 6 6 C 1.42898 * 117.00143 * 179.97438 * 5 4 3 7 7 C 1.50703 * 109.47171 * 180.02562 * 6 5 4 8 8 O 1.21278 * 119.99985 * 359.97438 * 7 6 5 9 9 N 1.34777 * 120.00161 * 180.02562 * 7 6 5 10 10 C 1.46496 * 120.00271 * 180.02562 * 9 7 6 11 11 H 1.09000 * 112.84879 * 334.65982 * 10 9 7 12 12 C 1.53783 * 113.61576 * 105.86138 * 10 9 7 13 13 C 1.54045 * 86.98565 * 89.16097 * 12 10 9 14 14 H 1.08996 * 113.69153 * 270.87323 * 13 12 10 15 15 O 1.42905 * 113.61935 * 139.97993 * 13 12 10 16 16 C 1.42895 * 114.00129 * 112.50175 * 15 13 12 17 17 C 1.53779 * 113.61539 * 203.46979 * 10 9 7 18 18 C 1.38562 * 119.85550 * 180.30068 * 4 3 2 19 19 C 1.38250 * 119.99713 * 359.47061 * 18 4 3 20 20 C 1.38253 * 120.14684 * 0.50729 * 19 18 4 21 21 C 1.50693 * 119.92646 * 179.74764 * 20 19 18 22 22 O 1.42898 * 109.47404 * 245.02096 * 21 20 19 23 23 Si 1.86302 * 109.47402 * 5.02294 * 21 20 19 24 24 C 1.38239 * 120.14594 * 359.76690 * 20 19 18 25 25 H 1.09002 * 109.46994 * 179.97438 * 1 2 3 26 26 H 1.09008 * 109.46970 * 299.99282 * 1 2 3 27 27 H 1.08999 * 109.47242 * 59.99302 * 1 2 3 28 28 H 1.09002 * 109.47259 * 300.00512 * 6 5 4 29 29 H 1.09001 * 109.47074 * 60.00533 * 6 5 4 30 30 H 0.97005 * 119.99463 * 359.97438 * 9 7 6 31 31 H 1.08995 * 113.61142 * 203.66722 * 12 10 9 32 32 H 1.08994 * 113.61229 * 334.56550 * 12 10 9 33 33 H 1.09000 * 109.47285 * 179.97438 * 16 15 13 34 34 H 1.09001 * 109.47110 * 300.00256 * 16 15 13 35 35 H 1.09002 * 109.47121 * 60.00216 * 16 15 13 36 36 H 1.09006 * 113.61755 * 25.42826 * 17 10 9 37 37 H 1.08999 * 113.61692 * 156.25184 * 17 10 9 38 38 H 1.07998 * 120.00300 * 179.70387 * 18 4 3 39 39 H 1.07997 * 119.92389 * 180.25638 * 19 18 4 40 40 H 1.08999 * 109.47261 * 125.02075 * 21 20 19 41 41 H 0.96704 * 113.99548 * 59.99654 * 22 21 20 42 42 H 1.48498 * 110.00098 * 179.97438 * 23 21 20 43 43 H 1.48500 * 109.99594 * 301.32084 * 23 21 20 44 44 H 1.07996 * 120.00048 * 179.97438 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1795 0.1477 -0.0016 6 6 5.6003 0.3007 -0.0027 7 6 6.2519 -1.0582 -0.0044 8 8 5.5670 -2.0591 -0.0042 9 7 7.5957 -1.1612 -0.0051 10 6 8.2291 -2.4822 -0.0073 11 1 7.5937 -3.2570 0.4217 12 6 8.8421 -2.8691 -1.3635 13 6 10.1375 -2.1900 -0.8799 14 1 10.1893 -1.1272 -1.1164 15 8 11.3248 -2.8977 -1.2425 16 6 12.1421 -2.2127 -2.1937 17 6 9.6610 -2.4797 0.5533 18 6 4.0603 2.5233 0.0058 19 6 3.3029 3.6799 0.0015 20 6 1.9223 3.6057 0.0016 21 6 1.1016 4.8696 0.0027 22 8 0.3651 4.9583 1.2240 23 14 2.2308 6.3435 -0.1500 24 6 1.2932 2.3748 0.0010 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8901 27 1 -0.3634 0.5139 -0.8899 28 1 5.9058 0.8509 -0.8926 29 1 5.9072 0.8500 0.8874 30 1 8.1434 -0.3606 -0.0049 31 1 8.9406 -3.9451 -1.5070 32 1 8.3757 -2.3689 -2.2121 33 1 13.0231 -2.8148 -2.4161 34 1 11.5738 -2.0478 -3.1091 35 1 12.4531 -1.2529 -1.7812 36 1 9.8554 -1.6651 1.2511 37 1 9.9826 -3.4490 0.9341 38 1 5.1385 2.5840 0.0102 39 1 3.7908 4.6433 0.0023 40 1 0.4091 4.8538 -0.8389 41 1 0.9188 4.9768 2.0167 42 1 1.4334 7.5963 -0.1507 43 1 3.2007 6.3588 0.9744 44 1 0.2146 2.3197 0.0014 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_12343576_60476.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:42 Heat of formation + Delta-G solvation = -113.683728 kcal Electronic energy + Delta-G solvation = -27055.016959 eV Core-core repulsion = 22941.848256 eV Total energy + Delta-G solvation = -4113.168703 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.150 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.84519 -41.32150 -40.05659 -39.10639 -38.88246 -37.33135 -36.97746 -34.14828 -32.04985 -31.47405 -29.67638 -28.44592 -27.82583 -26.85763 -26.26355 -25.12503 -23.61764 -22.60706 -21.90191 -20.71968 -19.81839 -18.60106 -18.51281 -18.06354 -17.77572 -17.53644 -17.07518 -16.86778 -16.65319 -16.55948 -16.16709 -16.14473 -15.87253 -15.80896 -15.39770 -15.30189 -14.76251 -14.32359 -14.22029 -13.80687 -13.75175 -13.65556 -13.52716 -13.45985 -13.35371 -12.65344 -12.56821 -12.29989 -12.19756 -12.14365 -12.05134 -12.01396 -11.65437 -11.62969 -10.91899 -10.64128 -10.54369 -10.21197 -9.80480 -8.87616 -5.00306 0.15682 0.28101 1.23948 1.37900 1.45625 1.54777 1.92113 2.30713 2.47829 2.54609 2.76013 3.31865 3.32697 3.40796 3.44881 3.60698 3.70806 3.73436 3.76735 3.78636 3.89296 3.91975 4.10950 4.24059 4.27476 4.28434 4.32479 4.36992 4.38277 4.51491 4.54787 4.64629 4.65817 4.68685 4.70819 4.80530 4.86759 4.93138 4.98344 5.08316 5.35262 5.37738 5.53779 5.94298 6.16383 6.27274 6.36392 6.53084 7.06779 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.105 3.895 5 O -0.277 6.277 6 C 0.039 3.961 7 C 0.519 3.481 8 O -0.504 6.504 9 N -0.714 5.714 10 C 0.122 3.878 11 H 0.113 0.887 12 C -0.166 4.166 13 C 0.060 3.940 14 H 0.086 0.914 15 O -0.376 6.376 16 C 0.029 3.971 17 C -0.141 4.141 18 C -0.170 4.170 19 C -0.115 4.115 20 C -0.113 4.113 21 C -0.073 4.073 22 O -0.530 6.530 23 Si 0.688 3.312 24 C -0.146 4.146 25 H 0.103 0.897 26 H 0.056 0.944 27 H 0.056 0.944 28 H 0.095 0.905 29 H 0.095 0.905 30 H 0.402 0.598 31 H 0.102 0.898 32 H 0.074 0.926 33 H 0.087 0.913 34 H 0.042 0.958 35 H 0.042 0.958 36 H 0.080 0.920 37 H 0.108 0.892 38 H 0.139 0.861 39 H 0.133 0.867 40 H 0.118 0.882 41 H 0.376 0.624 42 H -0.257 1.257 43 H -0.260 1.260 44 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.456 4.432 -1.877 6.559 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.040 4.040 7 C 0.303 3.697 8 O -0.377 6.377 9 N -0.368 5.368 10 C 0.017 3.983 11 H 0.131 0.869 12 C -0.205 4.205 13 C 0.002 3.998 14 H 0.104 0.896 15 O -0.294 6.294 16 C -0.068 4.068 17 C -0.179 4.179 18 C -0.189 4.189 19 C -0.133 4.133 20 C -0.113 4.113 21 C -0.183 4.183 22 O -0.336 6.336 23 Si 0.589 3.411 24 C -0.165 4.165 25 H 0.121 0.879 26 H 0.075 0.925 27 H 0.075 0.925 28 H 0.113 0.887 29 H 0.113 0.887 30 H 0.236 0.764 31 H 0.121 0.879 32 H 0.093 0.907 33 H 0.106 0.894 34 H 0.061 0.939 35 H 0.061 0.939 36 H 0.098 0.902 37 H 0.126 0.874 38 H 0.157 0.843 39 H 0.150 0.850 40 H 0.136 0.864 41 H 0.224 0.776 42 H -0.183 1.183 43 H -0.185 1.185 44 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 3.759 3.845 -1.839 5.683 hybrid contribution 0.000 0.642 0.919 1.121 sum 3.759 4.487 -0.920 5.926 Atomic orbital electron populations 1.23136 0.78095 1.04433 1.01369 1.86250 1.21354 1.25316 1.88516 1.18287 0.89015 0.85585 1.00992 1.18282 0.88306 0.85746 1.01775 1.86278 1.15984 1.27777 1.88853 1.22466 0.81364 0.96118 1.04035 1.20029 0.82302 0.90634 0.76727 1.90806 1.62505 1.38004 1.46393 1.45507 1.05907 1.08876 1.76462 1.21647 0.93722 0.85486 0.97435 0.86911 1.24033 0.95715 1.03014 0.97755 1.23887 0.84589 0.95674 0.95674 0.89571 1.87963 1.34271 1.45583 1.61578 1.22823 0.94977 0.97311 0.91674 1.23616 0.93520 1.04545 0.96260 1.20986 1.00435 0.90679 1.06753 1.20736 0.92901 0.98023 1.01609 1.19970 0.93684 0.95096 1.02594 1.25008 1.01689 1.01717 0.89851 1.86603 1.36172 1.95488 1.15362 0.94943 0.79618 0.76428 0.90082 1.20946 1.00382 0.90402 1.04730 0.87851 0.92520 0.92499 0.88676 0.88742 0.76379 0.87927 0.90699 0.89433 0.93906 0.93930 0.90177 0.87377 0.84333 0.85004 0.86423 0.77608 1.18259 1.18469 0.84188 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.28 10.28 -34.21 -0.35 -1.63 16 3 C 0.11 0.34 6.70 -39.12 -0.26 0.08 16 4 C 0.10 0.26 6.70 -39.12 -0.26 0.00 16 5 O -0.28 -1.02 9.45 -47.34 -0.45 -1.47 16 6 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 7 C 0.52 0.75 7.91 -10.98 -0.09 0.67 16 8 O -0.50 -3.44 16.12 -14.35 -0.23 -3.67 16 9 N -0.71 1.29 5.26 -53.02 -0.28 1.02 16 10 C 0.12 -0.09 4.30 -67.12 -0.29 -0.37 16 11 H 0.11 0.13 7.50 -51.93 -0.39 -0.26 16 12 C -0.17 0.10 7.73 -25.78 -0.20 -0.10 16 13 C 0.06 -0.08 4.20 -25.78 -0.11 -0.19 16 14 H 0.09 -0.27 7.87 -51.93 -0.41 -0.68 16 15 O -0.38 -0.36 10.72 -35.23 -0.38 -0.73 16 16 C 0.03 -0.04 10.85 101.05 1.10 1.06 16 17 C -0.14 0.26 7.65 -25.92 -0.20 0.06 16 18 C -0.17 0.09 9.04 -39.46 -0.36 -0.27 16 19 C -0.11 0.09 8.66 -39.57 -0.34 -0.25 16 20 C -0.11 -0.02 5.35 -104.62 -0.56 -0.58 16 21 C -0.07 0.04 2.80 36.00 0.10 0.14 16 22 O -0.53 -0.51 12.83 -35.23 -0.45 -0.96 16 23 Si 0.69 -1.05 29.88 -169.99 -5.08 -6.13 16 24 C -0.15 -0.19 8.67 -39.46 -0.34 -0.54 16 25 H 0.10 -0.11 8.14 -51.93 -0.42 -0.53 16 26 H 0.06 -0.04 7.66 -51.92 -0.40 -0.44 16 27 H 0.06 -0.06 7.66 -51.93 -0.40 -0.46 16 28 H 0.10 -0.37 7.68 -51.93 -0.40 -0.77 16 29 H 0.09 -0.35 7.65 -51.93 -0.40 -0.75 16 30 H 0.40 -2.10 8.70 -40.82 -0.36 -2.45 16 31 H 0.10 0.01 8.14 -51.93 -0.42 -0.42 16 32 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 33 H 0.09 -0.17 8.14 -51.93 -0.42 -0.60 16 34 H 0.04 -0.08 8.14 -51.93 -0.42 -0.51 16 35 H 0.04 -0.10 8.14 -51.93 -0.42 -0.53 16 36 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 37 H 0.11 -0.15 8.14 -51.93 -0.42 -0.57 16 38 H 0.14 -0.52 6.30 -52.49 -0.33 -0.85 16 39 H 0.13 -0.37 4.83 -52.49 -0.25 -0.62 16 40 H 0.12 -0.15 7.96 -51.93 -0.41 -0.56 16 41 H 0.38 -0.67 8.70 45.56 0.40 -0.28 16 42 H -0.26 -0.50 7.11 56.52 0.40 -0.09 16 43 H -0.26 -0.04 7.00 56.52 0.40 0.36 16 44 H 0.14 0.05 6.30 -52.49 -0.33 -0.29 16 LS Contribution 368.19 15.07 5.55 5.55 Total: 0.00 -11.00 368.19 -8.56 -19.57 By element: Atomic # 1 Polarization: -6.12 SS G_CDS: -6.26 Total: -12.39 kcal Atomic # 6 Polarization: 1.49 SS G_CDS: -0.63 Total: 0.86 kcal Atomic # 7 Polarization: 1.29 SS G_CDS: -0.28 Total: 1.02 kcal Atomic # 8 Polarization: -6.61 SS G_CDS: -1.86 Total: -8.47 kcal Atomic # 14 Polarization: -1.05 SS G_CDS: -5.08 Total: -6.13 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -11.00 -8.56 -19.57 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_12343576_60476.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.118 kcal (2) G-P(sol) polarization free energy of solvation -11.005 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.122 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.561 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.566 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.684 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds